Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Shank3Q4ACU6 Pcdh15-215ENSMUST00000131321 6926 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Shank3Q4ACU6 Olfr1385-202ENSMUST00000214948 4412 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Shank3Q4ACU6 Gm12289-201ENSMUST00000130860 2235 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Shank3Q4ACU6 Pnpla8-204ENSMUST00000143771 2974 ntTSL 5 BASIC5.71□□□□□ -1.5
Shank3Q4ACU6 Pde1a-204ENSMUST00000102653 2439 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Shank3Q4ACU6 Gm10933-201ENSMUST00000221891 1861 ntBASIC5.7□□□□□ -1.5
Shank3Q4ACU6 Gm38106-201ENSMUST00000194107 2534 ntBASIC5.7□□□□□ -1.5
Shank3Q4ACU6 Zfp568-202ENSMUST00000146074 6867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Shank3Q4ACU6 Gm8267-203ENSMUST00000226900 1592 ntAPPRIS ALT2 BASIC5.7□□□□□ -1.5
Shank3Q4ACU6 Fcrl5-203ENSMUST00000178261 1791 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Shank3Q4ACU6 Fcrl5-201ENSMUST00000049926 1791 ntAPPRIS P4 TSL 5 BASIC5.7□□□□□ -1.5
Shank3Q4ACU6 Vmn2r105-201ENSMUST00000167382 2583 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Shank3Q4ACU6 Slc19a3-201ENSMUST00000045560 2974 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Shank3Q4ACU6 Dnm3os-201ENSMUST00000139662 7928 ntBASIC5.7□□□□□ -1.5
Shank3Q4ACU6 Serpina1f-203ENSMUST00000118101 1453 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Shank3Q4ACU6 Gm14539-201ENSMUST00000117527 174 ntBASIC5.7□□□□□ -1.5
Shank3Q4ACU6 Gm11598-201ENSMUST00000119257 357 ntBASIC5.7□□□□□ -1.5
Shank3Q4ACU6 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC5.7□□□□□ -1.5
Shank3Q4ACU6 Gm23554-201ENSMUST00000157818 110 ntBASIC5.7□□□□□ -1.5
Shank3Q4ACU6 Gm25264-201ENSMUST00000158519 117 ntBASIC5.7□□□□□ -1.5
Shank3Q4ACU6 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Shank3Q4ACU6 Gm26877-201ENSMUST00000180728 633 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Shank3Q4ACU6 Olfr996-201ENSMUST00000077075 1068 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Shank3Q4ACU6 Mir132-201ENSMUST00000083603 66 ntBASIC5.7□□□□□ -1.5
Shank3Q4ACU6 AC126673.1-201ENSMUST00000223208 3856 ntBASIC5.7□□□□□ -1.5
Shank3Q4ACU6 Zfp846-202ENSMUST00000115557 12974 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Shank3Q4ACU6 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Shank3Q4ACU6 CT025675.1-201ENSMUST00000228171 1567 ntBASIC5.7□□□□□ -1.5
Shank3Q4ACU6 Zscan4a-201ENSMUST00000210573 2279 ntBASIC5.7□□□□□ -1.5
Shank3Q4ACU6 Olfr190-203ENSMUST00000216495 8240 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
Shank3Q4ACU6 Vmn1r218-202ENSMUST00000226692 10430 ntAPPRIS P2 BASIC5.69□□□□□ -1.5
Shank3Q4ACU6 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Shank3Q4ACU6 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Shank3Q4ACU6 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC5.69□□□□□ -1.5
Shank3Q4ACU6 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC5.69□□□□□ -1.5
Shank3Q4ACU6 Gm16094-201ENSMUST00000162784 427 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Shank3Q4ACU6 Gm17046-201ENSMUST00000168078 850 ntBASIC5.69□□□□□ -1.5
Shank3Q4ACU6 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Shank3Q4ACU6 Mir5106-201ENSMUST00000174936 73 ntBASIC5.69□□□□□ -1.5
Shank3Q4ACU6 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Shank3Q4ACU6 Vmn2r79-201ENSMUST00000164462 2556 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Shank3Q4ACU6 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Shank3Q4ACU6 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Shank3Q4ACU6 Slfn8-202ENSMUST00000092838 3529 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Shank3Q4ACU6 Gm37831-201ENSMUST00000191685 1787 ntBASIC5.69□□□□□ -1.5
Shank3Q4ACU6 Gm43374-201ENSMUST00000202498 2391 ntBASIC5.69□□□□□ -1.5
Shank3Q4ACU6 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Shank3Q4ACU6 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Shank3Q4ACU6 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Shank3Q4ACU6 Gm15151-201ENSMUST00000117106 177 ntBASIC5.68□□□□□ -1.5
Shank3Q4ACU6 Gm15012-201ENSMUST00000119176 106 ntBASIC5.68□□□□□ -1.5
Shank3Q4ACU6 Fpr2-202ENSMUST00000149944 883 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Shank3Q4ACU6 Gm25386-201ENSMUST00000157814 288 ntBASIC5.68□□□□□ -1.5
Shank3Q4ACU6 Gm37173-201ENSMUST00000194498 1017 ntBASIC5.68□□□□□ -1.5
Shank3Q4ACU6 Gm18482-201ENSMUST00000202405 760 ntBASIC5.68□□□□□ -1.5
Shank3Q4ACU6 Gm45574-201ENSMUST00000210921 331 ntBASIC5.68□□□□□ -1.5
Shank3Q4ACU6 Fabp9-201ENSMUST00000029038 583 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Shank3Q4ACU6 n-R5s3-201ENSMUST00000083879 112 ntBASIC5.68□□□□□ -1.5
Shank3Q4ACU6 Olfr1143-201ENSMUST00000090708 945 ntBASIC5.68□□□□□ -1.5
Shank3Q4ACU6 Olfr1039-201ENSMUST00000099910 960 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Shank3Q4ACU6 Olfr575-202ENSMUST00000213477 3512 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Shank3Q4ACU6 Dnah10-201ENSMUST00000058440 14038 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
Shank3Q4ACU6 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Shank3Q4ACU6 Clec2e-201ENSMUST00000032258 2099 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Shank3Q4ACU6 Olfr99-202ENSMUST00000216328 1778 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Shank3Q4ACU6 Gm31258-201ENSMUST00000194532 3297 ntBASIC5.68□□□□□ -1.5
Shank3Q4ACU6 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC5.68□□□□□ -1.5
Shank3Q4ACU6 Gm37212-201ENSMUST00000192582 3650 ntBASIC5.68□□□□□ -1.5
Shank3Q4ACU6 Olfr985-202ENSMUST00000214981 1879 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
Shank3Q4ACU6 Ccr2-204ENSMUST00000171719 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Shank3Q4ACU6 Gm2080-201ENSMUST00000211299 1573 ntBASIC5.68□□□□□ -1.5
Shank3Q4ACU6 Pramef25-201ENSMUST00000105766 1684 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Shank3Q4ACU6 Gm13854-201ENSMUST00000121183 1679 ntBASIC5.68□□□□□ -1.5
Shank3Q4ACU6 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Shank3Q4ACU6 Gm13162-201ENSMUST00000121481 454 ntBASIC5.68□□□□□ -1.5
Shank3Q4ACU6 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC5.68□□□□□ -1.5
Shank3Q4ACU6 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC5.68□□□□□ -1.5
Shank3Q4ACU6 Gm43044-201ENSMUST00000198091 379 ntBASIC5.68□□□□□ -1.5
Shank3Q4ACU6 AI506816-203ENSMUST00000198461 503 ntTSL 5 BASIC5.68□□□□□ -1.5
Shank3Q4ACU6 Gm42579-201ENSMUST00000200512 734 ntBASIC5.68□□□□□ -1.5
Shank3Q4ACU6 Gm9560-201ENSMUST00000205012 1201 ntBASIC5.68□□□□□ -1.5
Shank3Q4ACU6 Gm45659-201ENSMUST00000209295 564 ntTSL 2 BASIC5.68□□□□□ -1.5
Shank3Q4ACU6 AC110816.1-201ENSMUST00000218559 980 ntBASIC5.68□□□□□ -1.5
Shank3Q4ACU6 AC154241.1-201ENSMUST00000223952 356 ntBASIC5.68□□□□□ -1.5
Shank3Q4ACU6 AC125539.1-202ENSMUST00000226449 670 ntBASIC5.68□□□□□ -1.5
Shank3Q4ACU6 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Shank3Q4ACU6 Gm3629-201ENSMUST00000171706 1756 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Shank3Q4ACU6 Gm18066-201ENSMUST00000210904 1774 ntBASIC5.68□□□□□ -1.5
Shank3Q4ACU6 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Shank3Q4ACU6 Fscb-201ENSMUST00000059833 3361 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Shank3Q4ACU6 Adam26b-201ENSMUST00000080135 2476 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Shank3Q4ACU6 4921515E04Rik-203ENSMUST00000227364 2309 ntBASIC5.67□□□□□ -1.5
Shank3Q4ACU6 Mlip-205ENSMUST00000183955 3069 ntAPPRIS P5 TSL 5 BASIC5.67□□□□□ -1.5
Shank3Q4ACU6 Med12-201ENSMUST00000087948 6809 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Shank3Q4ACU6 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC5.67□□□□□ -1.5
Shank3Q4ACU6 Gm22936-201ENSMUST00000103955 126 ntBASIC5.67□□□□□ -1.5
Shank3Q4ACU6 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
Shank3Q4ACU6 Defa-ps5-201ENSMUST00000121541 279 ntBASIC5.67□□□□□ -1.5
Shank3Q4ACU6 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 90.3 ms