Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Gm18442-201ENSMUST00000220925 639 ntBASIC4.99□□□□□ -1.61
Upf3aQ3ULJ3 CT573086.3-201ENSMUST00000228762 594 ntBASIC4.99□□□□□ -1.61
Upf3aQ3ULJ3 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Upf3aQ3ULJ3 Olfr875-201ENSMUST00000080634 1004 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Upf3aQ3ULJ3 Gm6065-201ENSMUST00000081336 492 ntBASIC4.99□□□□□ -1.61
Upf3aQ3ULJ3 Gm23464-201ENSMUST00000083145 147 ntBASIC4.99□□□□□ -1.61
Upf3aQ3ULJ3 Snord22-201ENSMUST00000083153 126 ntBASIC4.99□□□□□ -1.61
Upf3aQ3ULJ3 Gm6043-201ENSMUST00000099961 492 ntBASIC4.99□□□□□ -1.61
Upf3aQ3ULJ3 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Upf3aQ3ULJ3 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Upf3aQ3ULJ3 Gm15581-201ENSMUST00000131334 5640 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Upf3aQ3ULJ3 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Upf3aQ3ULJ3 Olfr1406-202ENSMUST00000201132 2952 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
Upf3aQ3ULJ3 Gm43845-201ENSMUST00000202462 1820 ntBASIC4.99□□□□□ -1.61
Upf3aQ3ULJ3 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Upf3aQ3ULJ3 4932411K12Rik-201ENSMUST00000190493 3156 ntTSL 2 BASIC4.99□□□□□ -1.61
Upf3aQ3ULJ3 Ptprd-217ENSMUST00000174023 4530 ntTSL 5 BASIC4.99□□□□□ -1.61
Upf3aQ3ULJ3 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Upf3aQ3ULJ3 Cntnap5b-201ENSMUST00000086738 4027 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
Upf3aQ3ULJ3 Olfr799-203ENSMUST00000214182 1694 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Upf3aQ3ULJ3 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Upf3aQ3ULJ3 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC4.99□□□□□ -1.61
Upf3aQ3ULJ3 Gm42704-201ENSMUST00000196875 1778 ntBASIC4.99□□□□□ -1.61
Upf3aQ3ULJ3 Gm43266-201ENSMUST00000201049 1771 ntBASIC4.99□□□□□ -1.61
Upf3aQ3ULJ3 AC168056.3-201ENSMUST00000225395 2540 ntBASIC4.98□□□□□ -1.61
Upf3aQ3ULJ3 Olfr266-202ENSMUST00000213616 2195 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Upf3aQ3ULJ3 Igsf10-202ENSMUST00000193455 8484 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Upf3aQ3ULJ3 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC4.98□□□□□ -1.61
Upf3aQ3ULJ3 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Upf3aQ3ULJ3 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Upf3aQ3ULJ3 Ppih-202ENSMUST00000106317 613 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Upf3aQ3ULJ3 Gm2165-201ENSMUST00000124609 1118 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Upf3aQ3ULJ3 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Upf3aQ3ULJ3 Gm16180-201ENSMUST00000128662 312 ntTSL 3 BASIC4.98□□□□□ -1.61
Upf3aQ3ULJ3 Gm2101-204ENSMUST00000137421 1118 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Upf3aQ3ULJ3 Gm3669-205ENSMUST00000144018 1118 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Upf3aQ3ULJ3 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC4.98□□□□□ -1.61
Upf3aQ3ULJ3 Gm27883-201ENSMUST00000183941 102 ntBASIC4.98□□□□□ -1.61
Upf3aQ3ULJ3 Gm6649-201ENSMUST00000199743 1165 ntBASIC4.98□□□□□ -1.61
Upf3aQ3ULJ3 Gm43093-201ENSMUST00000202439 1213 ntBASIC4.98□□□□□ -1.61
Upf3aQ3ULJ3 Gm43580-201ENSMUST00000202892 284 ntBASIC4.98□□□□□ -1.61
Upf3aQ3ULJ3 Gm19131-201ENSMUST00000203408 789 ntBASIC4.98□□□□□ -1.61
Upf3aQ3ULJ3 Gm32536-201ENSMUST00000205209 445 ntBASIC4.98□□□□□ -1.61
Upf3aQ3ULJ3 Gm45857-201ENSMUST00000212207 356 ntBASIC4.98□□□□□ -1.61
Upf3aQ3ULJ3 Gm8942-201ENSMUST00000217892 400 ntBASIC4.98□□□□□ -1.61
Upf3aQ3ULJ3 Olfr1444-201ENSMUST00000059675 1129 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Upf3aQ3ULJ3 Gm23099-201ENSMUST00000083454 139 ntBASIC4.98□□□□□ -1.61
Upf3aQ3ULJ3 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Upf3aQ3ULJ3 n-R5s152-201ENSMUST00000093641 119 ntBASIC4.98□□□□□ -1.61
Upf3aQ3ULJ3 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Upf3aQ3ULJ3 C130073E24Rik-202ENSMUST00000211313 14112 ntTSL 5 BASIC4.98□□□□□ -1.61
Upf3aQ3ULJ3 Gm26767-201ENSMUST00000180936 4476 ntTSL 5 BASIC4.98□□□□□ -1.61
Upf3aQ3ULJ3 Zscan4a-201ENSMUST00000210573 2279 ntBASIC4.98□□□□□ -1.61
Upf3aQ3ULJ3 Lrrc39-201ENSMUST00000029573 3087 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Upf3aQ3ULJ3 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Upf3aQ3ULJ3 AC159326.1-201ENSMUST00000219989 1302 ntBASIC4.97□□□□□ -1.61
Upf3aQ3ULJ3 Gm38253-201ENSMUST00000194058 4678 ntBASIC4.97□□□□□ -1.61
Upf3aQ3ULJ3 Gm45235-201ENSMUST00000208016 4465 ntBASIC4.97□□□□□ -1.61
Upf3aQ3ULJ3 Olfr695-201ENSMUST00000216868 3953 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Upf3aQ3ULJ3 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Upf3aQ3ULJ3 Olfr350-203ENSMUST00000215100 2086 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Upf3aQ3ULJ3 Gm38243-201ENSMUST00000194737 1567 ntBASIC4.97□□□□□ -1.61
Upf3aQ3ULJ3 Gm11639-203ENSMUST00000212287 17665 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Upf3aQ3ULJ3 Gm22498-201ENSMUST00000104497 86 ntBASIC4.97□□□□□ -1.61
Upf3aQ3ULJ3 Gm11631-201ENSMUST00000119220 156 ntBASIC4.97□□□□□ -1.61
Upf3aQ3ULJ3 Gm15075-201ENSMUST00000122187 477 ntBASIC4.97□□□□□ -1.61
Upf3aQ3ULJ3 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC4.97□□□□□ -1.61
Upf3aQ3ULJ3 Gm24944-201ENSMUST00000158330 128 ntBASIC4.97□□□□□ -1.61
Upf3aQ3ULJ3 4430402I18Rik-203ENSMUST00000160542 1057 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Upf3aQ3ULJ3 Gm3091-201ENSMUST00000163408 484 ntBASIC4.97□□□□□ -1.61
Upf3aQ3ULJ3 Khdrbs2-202ENSMUST00000185666 543 ntTSL 2 BASIC4.97□□□□□ -1.61
Upf3aQ3ULJ3 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC4.97□□□□□ -1.61
Upf3aQ3ULJ3 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC4.97□□□□□ -1.61
Upf3aQ3ULJ3 Gm19201-201ENSMUST00000210127 778 ntBASIC4.97□□□□□ -1.61
Upf3aQ3ULJ3 AC159246.1-201ENSMUST00000214478 249 ntBASIC4.97□□□□□ -1.61
Upf3aQ3ULJ3 AC156798.1-201ENSMUST00000220508 224 ntBASIC4.97□□□□□ -1.61
Upf3aQ3ULJ3 AC154329.1-201ENSMUST00000224408 3129 ntBASIC4.97□□□□□ -1.61
Upf3aQ3ULJ3 Myo3a-201ENSMUST00000044749 5082 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Upf3aQ3ULJ3 Cyp2j5-201ENSMUST00000030299 2345 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Upf3aQ3ULJ3 Hyal5-201ENSMUST00000031689 1838 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Upf3aQ3ULJ3 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC4.97□□□□□ -1.61
Upf3aQ3ULJ3 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Upf3aQ3ULJ3 Platr21-201ENSMUST00000126339 3511 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Upf3aQ3ULJ3 Fpgt-201ENSMUST00000066568 3518 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Upf3aQ3ULJ3 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Upf3aQ3ULJ3 Gm37226-201ENSMUST00000191644 3255 ntBASIC4.96□□□□□ -1.61
Upf3aQ3ULJ3 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.61
Upf3aQ3ULJ3 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
Upf3aQ3ULJ3 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
Upf3aQ3ULJ3 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC4.96□□□□□ -1.62
Upf3aQ3ULJ3 Gm43426-201ENSMUST00000197287 2597 ntBASIC4.96□□□□□ -1.62
Upf3aQ3ULJ3 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Upf3aQ3ULJ3 Olfr698-204ENSMUST00000216255 4024 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Upf3aQ3ULJ3 Gm3696-201ENSMUST00000167923 1814 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Upf3aQ3ULJ3 Ceacam13-202ENSMUST00000108488 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
Upf3aQ3ULJ3 Gm9308-201ENSMUST00000119073 448 ntBASIC4.96□□□□□ -1.62
Upf3aQ3ULJ3 Gm15981-201ENSMUST00000119196 457 ntBASIC4.96□□□□□ -1.62
Upf3aQ3ULJ3 Gm14067-201ENSMUST00000119340 314 ntBASIC4.96□□□□□ -1.62
Upf3aQ3ULJ3 Gm15034-201ENSMUST00000120043 349 ntBASIC4.96□□□□□ -1.62
Upf3aQ3ULJ3 Rpl26-ps5-201ENSMUST00000122220 439 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms