Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC5.14□□□□□ -1.59
Col8a1Q00780 Gm18413-201ENSMUST00000221573 655 ntBASIC5.14□□□□□ -1.59
Col8a1Q00780 AC153662.1-201ENSMUST00000222220 270 ntBASIC5.14□□□□□ -1.59
Col8a1Q00780 AC173481.1-201ENSMUST00000223351 270 ntBASIC5.14□□□□□ -1.59
Col8a1Q00780 AC170810.3-201ENSMUST00000226177 374 ntBASIC5.14□□□□□ -1.59
Col8a1Q00780 AC132112.1-201ENSMUST00000226354 505 ntBASIC5.14□□□□□ -1.59
Col8a1Q00780 AC164315.1-201ENSMUST00000226452 708 ntBASIC5.14□□□□□ -1.59
Col8a1Q00780 AC166344.2-201ENSMUST00000226747 374 ntBASIC5.14□□□□□ -1.59
Col8a1Q00780 AC122251.2-201ENSMUST00000227341 603 ntBASIC5.14□□□□□ -1.59
Col8a1Q00780 Cd200r3-201ENSMUST00000048479 986 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col8a1Q00780 Olfr356-201ENSMUST00000095021 948 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Col8a1Q00780 Olfr1087-201ENSMUST00000099877 942 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Col8a1Q00780 Ttk-201ENSMUST00000070326 2871 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col8a1Q00780 Olfr1348-210ENSMUST00000214383 2582 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Col8a1Q00780 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col8a1Q00780 Olfr821-202ENSMUST00000205181 1993 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
Col8a1Q00780 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col8a1Q00780 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col8a1Q00780 Gm43864-201ENSMUST00000204452 4028 ntBASIC5.14□□□□□ -1.59
Col8a1Q00780 Zfp934-203ENSMUST00000220648 2439 ntTSL 5 BASIC5.14□□□□□ -1.59
Col8a1Q00780 Nlrp9a-203ENSMUST00000117252 2796 ntTSL 2 BASIC5.14□□□□□ -1.59
Col8a1Q00780 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Col8a1Q00780 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Col8a1Q00780 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col8a1Q00780 Gm42661-201ENSMUST00000202364 1442 ntBASIC5.14□□□□□ -1.59
Col8a1Q00780 Gm42561-201ENSMUST00000202563 1442 ntBASIC5.14□□□□□ -1.59
Col8a1Q00780 Vmn2r-ps54-205ENSMUST00000182110 2587 ntBASIC5.13□□□□□ -1.59
Col8a1Q00780 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Col8a1Q00780 Gm42541-201ENSMUST00000199871 2249 ntBASIC5.13□□□□□ -1.59
Col8a1Q00780 Gm20276-201ENSMUST00000216122 2648 ntBASIC5.13□□□□□ -1.59
Col8a1Q00780 AC141476.1-201ENSMUST00000224988 3387 ntBASIC5.13□□□□□ -1.59
Col8a1Q00780 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Col8a1Q00780 Gm20789-201ENSMUST00000221002 4195 ntBASIC5.13□□□□□ -1.59
Col8a1Q00780 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC5.13□□□□□ -1.59
Col8a1Q00780 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Col8a1Q00780 Olfr9-201ENSMUST00000091996 2672 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Col8a1Q00780 Vmn2r121-201ENSMUST00000094491 3062 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Col8a1Q00780 AC174459.1-201ENSMUST00000224476 1943 ntBASIC5.13□□□□□ -1.59
Col8a1Q00780 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Col8a1Q00780 Gm34004-201ENSMUST00000215460 2837 ntTSL 5 BASIC5.13□□□□□ -1.59
Col8a1Q00780 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
Col8a1Q00780 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Col8a1Q00780 Gm44255-201ENSMUST00000203456 2053 ntBASIC5.13□□□□□ -1.59
Col8a1Q00780 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Col8a1Q00780 AC130661.1-201ENSMUST00000218248 1680 ntBASIC5.13□□□□□ -1.59
Col8a1Q00780 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Col8a1Q00780 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
Col8a1Q00780 Mir449c-201ENSMUST00000102192 109 ntBASIC5.13□□□□□ -1.59
Col8a1Q00780 Igkv5-37-201ENSMUST00000103372 359 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Col8a1Q00780 Gm14308-202ENSMUST00000117267 777 ntTSL 3 BASIC5.13□□□□□ -1.59
Col8a1Q00780 Gm16394-201ENSMUST00000117289 675 ntBASIC5.13□□□□□ -1.59
Col8a1Q00780 Gm14670-201ENSMUST00000117327 337 ntBASIC5.13□□□□□ -1.59
Col8a1Q00780 Gm13672-201ENSMUST00000117554 459 ntBASIC5.13□□□□□ -1.59
Col8a1Q00780 Gm13627-201ENSMUST00000119700 706 ntBASIC5.13□□□□□ -1.59
Col8a1Q00780 Gm5287-201ENSMUST00000120666 598 ntBASIC5.13□□□□□ -1.59
Col8a1Q00780 Gm14986-201ENSMUST00000121262 1002 ntBASIC5.13□□□□□ -1.59
Col8a1Q00780 Gm12494-201ENSMUST00000121684 521 ntBASIC5.13□□□□□ -1.59
Col8a1Q00780 Gm11965-201ENSMUST00000122017 277 ntBASIC5.13□□□□□ -1.59
Col8a1Q00780 n-R5s48-201ENSMUST00000122482 110 ntBASIC5.13□□□□□ -1.59
Col8a1Q00780 Gm22959-201ENSMUST00000122514 303 ntBASIC5.13□□□□□ -1.59
Col8a1Q00780 Gm17216-201ENSMUST00000130872 728 ntTSL 5 BASIC5.13□□□□□ -1.59
Col8a1Q00780 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC5.13□□□□□ -1.59
Col8a1Q00780 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC5.13□□□□□ -1.59
Col8a1Q00780 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC5.13□□□□□ -1.59
Col8a1Q00780 Gm16060-201ENSMUST00000153140 478 ntBASIC5.13□□□□□ -1.59
Col8a1Q00780 AC122858.3-202ENSMUST00000161721 433 ntTSL 5 BASIC5.13□□□□□ -1.59
Col8a1Q00780 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
Col8a1Q00780 Gm17472-201ENSMUST00000167638 352 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Col8a1Q00780 Gm6155-201ENSMUST00000173735 341 ntBASIC5.13□□□□□ -1.59
Col8a1Q00780 Gm20549-201ENSMUST00000174804 429 ntBASIC5.13□□□□□ -1.59
Col8a1Q00780 Obox4-ps11-201ENSMUST00000176150 724 ntBASIC5.13□□□□□ -1.59
Col8a1Q00780 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC5.13□□□□□ -1.59
Col8a1Q00780 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Col8a1Q00780 Gm20795-201ENSMUST00000178528 699 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Col8a1Q00780 Gm20773-201ENSMUST00000178940 681 ntBASIC5.13□□□□□ -1.59
Col8a1Q00780 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Col8a1Q00780 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Col8a1Q00780 Gm23003-201ENSMUST00000179948 107 ntBASIC5.13□□□□□ -1.59
Col8a1Q00780 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Col8a1Q00780 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Col8a1Q00780 4933433F19Rik-201ENSMUST00000180571 1088 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Col8a1Q00780 Mir6926-201ENSMUST00000184562 68 ntBASIC5.13□□□□□ -1.59
Col8a1Q00780 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC5.13□□□□□ -1.59
Col8a1Q00780 Olfr1252-201ENSMUST00000186710 1099 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Col8a1Q00780 1700016L21Rik-201ENSMUST00000187497 394 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Col8a1Q00780 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Col8a1Q00780 Gm37308-201ENSMUST00000194684 100 ntBASIC5.13□□□□□ -1.59
Col8a1Q00780 Gm37119-201ENSMUST00000195691 389 ntBASIC5.13□□□□□ -1.59
Col8a1Q00780 Gm43436-201ENSMUST00000199308 147 ntBASIC5.13□□□□□ -1.59
Col8a1Q00780 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC5.13□□□□□ -1.59
Col8a1Q00780 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Col8a1Q00780 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Col8a1Q00780 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC5.13□□□□□ -1.59
Col8a1Q00780 Gm45798-201ENSMUST00000212370 511 ntTSL 5 BASIC5.13□□□□□ -1.59
Col8a1Q00780 9530014B07Rik-201ENSMUST00000221882 744 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Col8a1Q00780 AC160999.1-201ENSMUST00000225675 810 ntBASIC5.13□□□□□ -1.59
Col8a1Q00780 AC122858.1-201ENSMUST00000226212 433 ntBASIC5.13□□□□□ -1.59
Col8a1Q00780 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Col8a1Q00780 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Col8a1Q00780 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms