Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CiitaP79621 Gm6645-201ENSMUST00000118505 2726 ntBASIC5.35□□□□□ -1.55
CiitaP79621 Slamf7-203ENSMUST00000192195 3975 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
CiitaP79621 Gm37250-201ENSMUST00000194919 2388 ntBASIC5.35□□□□□ -1.55
CiitaP79621 Olfr147-202ENSMUST00000214648 5356 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
CiitaP79621 Olfr402-202ENSMUST00000216722 3566 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
CiitaP79621 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CiitaP79621 Gm37789-201ENSMUST00000192862 2889 ntBASIC5.34□□□□□ -1.55
CiitaP79621 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC5.34□□□□□ -1.55
CiitaP79621 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC5.34□□□□□ -1.55
CiitaP79621 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CiitaP79621 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CiitaP79621 Gm5346-201ENSMUST00000056023 2326 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CiitaP79621 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.55
CiitaP79621 Gm37041-201ENSMUST00000195873 3853 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CiitaP79621 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC5.34□□□□□ -1.55
CiitaP79621 Gm8660-201ENSMUST00000105187 918 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CiitaP79621 Gm4177-201ENSMUST00000105196 918 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CiitaP79621 Gm5728-201ENSMUST00000105209 918 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CiitaP79621 Ppih-202ENSMUST00000106317 613 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CiitaP79621 Gm2012-201ENSMUST00000121900 1131 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
CiitaP79621 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC5.34□□□□□ -1.55
CiitaP79621 Vmn1r94-201ENSMUST00000164526 918 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CiitaP79621 Gm4216-201ENSMUST00000168926 918 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CiitaP79621 Vmn1r142-201ENSMUST00000169697 918 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CiitaP79621 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CiitaP79621 Gm20830-202ENSMUST00000190426 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CiitaP79621 Gm37700-201ENSMUST00000192617 965 ntBASIC5.34□□□□□ -1.55
CiitaP79621 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC5.34□□□□□ -1.55
CiitaP79621 Trbv28-201ENSMUST00000192804 264 ntBASIC5.34□□□□□ -1.55
CiitaP79621 Mir142-201ENSMUST00000198092 64 ntBASIC5.34□□□□□ -1.55
CiitaP79621 Gm8891-201ENSMUST00000198546 832 ntBASIC5.34□□□□□ -1.55
CiitaP79621 Gm43717-201ENSMUST00000198684 310 ntBASIC5.34□□□□□ -1.55
CiitaP79621 Gm43309-201ENSMUST00000200837 458 ntBASIC5.34□□□□□ -1.55
CiitaP79621 Gm44200-201ENSMUST00000204883 662 ntTSL 5 BASIC5.34□□□□□ -1.55
CiitaP79621 Gm44876-201ENSMUST00000205394 670 ntTSL 3 BASIC5.34□□□□□ -1.55
CiitaP79621 Gm32916-203ENSMUST00000208033 789 ntTSL 5 BASIC5.34□□□□□ -1.55
CiitaP79621 Gm36423-204ENSMUST00000222446 541 ntTSL 2 BASIC5.34□□□□□ -1.55
CiitaP79621 AC131745.1-201ENSMUST00000223660 330 ntBASIC5.34□□□□□ -1.55
CiitaP79621 Rpl36a-ps1-201ENSMUST00000081987 449 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CiitaP79621 Xlr5c-201ENSMUST00000088450 540 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CiitaP79621 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CiitaP79621 Gm43826-201ENSMUST00000199604 2612 ntBASIC5.34□□□□□ -1.55
CiitaP79621 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
CiitaP79621 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
CiitaP79621 Olfr578-202ENSMUST00000215606 3665 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
CiitaP79621 Olfr1341-202ENSMUST00000214131 4300 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
CiitaP79621 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC5.34□□□□□ -1.56
CiitaP79621 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
CiitaP79621 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CiitaP79621 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
CiitaP79621 Arrdc3-205ENSMUST00000161441 1908 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CiitaP79621 Gm45324-201ENSMUST00000211193 5638 ntBASIC5.33□□□□□ -1.56
CiitaP79621 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CiitaP79621 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CiitaP79621 Acer3-201ENSMUST00000033020 11340 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CiitaP79621 Gm42615-201ENSMUST00000197704 1820 ntBASIC5.33□□□□□ -1.56
CiitaP79621 Gm12106-201ENSMUST00000116006 1200 ntBASIC5.33□□□□□ -1.56
CiitaP79621 Gm11433-201ENSMUST00000118318 228 ntBASIC5.33□□□□□ -1.56
CiitaP79621 Gm12849-201ENSMUST00000120013 739 ntBASIC5.33□□□□□ -1.56
CiitaP79621 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CiitaP79621 Gm12752-201ENSMUST00000121657 811 ntBASIC5.33□□□□□ -1.56
CiitaP79621 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC5.33□□□□□ -1.56
CiitaP79621 Gm17043-201ENSMUST00000164621 1283 ntBASIC5.33□□□□□ -1.56
CiitaP79621 Gm6245-201ENSMUST00000164699 768 ntBASIC5.33□□□□□ -1.56
CiitaP79621 Atp2b4-208ENSMUST00000167348 243 ntBASIC5.33□□□□□ -1.56
CiitaP79621 Olfr1391-201ENSMUST00000187509 938 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CiitaP79621 Gm21803-201ENSMUST00000188897 693 ntBASIC5.33□□□□□ -1.56
CiitaP79621 Gm29020-201ENSMUST00000191166 290 ntTSL 5 BASIC5.33□□□□□ -1.56
CiitaP79621 Gm38330-201ENSMUST00000192743 959 ntBASIC5.33□□□□□ -1.56
CiitaP79621 Mirlet7e-201ENSMUST00000196737 93 ntBASIC5.33□□□□□ -1.56
CiitaP79621 4930478M09Rik-201ENSMUST00000201366 1113 ntBASIC5.33□□□□□ -1.56
CiitaP79621 Gm32308-201ENSMUST00000203053 280 ntBASIC5.33□□□□□ -1.56
CiitaP79621 Gm44648-201ENSMUST00000208267 329 ntBASIC5.33□□□□□ -1.56
CiitaP79621 Gm17766-201ENSMUST00000209223 442 ntBASIC5.33□□□□□ -1.56
CiitaP79621 Olfr540-ps1-201ENSMUST00000210499 612 ntBASIC5.33□□□□□ -1.56
CiitaP79621 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CiitaP79621 Gm18377-201ENSMUST00000215141 607 ntBASIC5.33□□□□□ -1.56
CiitaP79621 AC158633.1-201ENSMUST00000219892 649 ntBASIC5.33□□□□□ -1.56
CiitaP79621 CT025616.1-201ENSMUST00000221158 412 ntBASIC5.33□□□□□ -1.56
CiitaP79621 AC174776.1-201ENSMUST00000221509 405 ntBASIC5.33□□□□□ -1.56
CiitaP79621 AC123705.4-202ENSMUST00000221602 697 ntTSL 2 BASIC5.33□□□□□ -1.56
CiitaP79621 AC174776.2-201ENSMUST00000222561 405 ntBASIC5.33□□□□□ -1.56
CiitaP79621 AC163721.1-201ENSMUST00000222669 394 ntTSL 3 BASIC5.33□□□□□ -1.56
CiitaP79621 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CiitaP79621 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CiitaP79621 Olfr720-201ENSMUST00000035250 1023 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CiitaP79621 Olfr482-201ENSMUST00000081184 972 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CiitaP79621 Gm24166-201ENSMUST00000082724 135 ntBASIC5.33□□□□□ -1.56
CiitaP79621 Olfr859-201ENSMUST00000086480 930 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CiitaP79621 Gm44250-201ENSMUST00000203092 4229 ntBASIC5.33□□□□□ -1.56
CiitaP79621 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CiitaP79621 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CiitaP79621 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CiitaP79621 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC5.33□□□□□ -1.56
CiitaP79621 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CiitaP79621 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CiitaP79621 Rgsl1-201ENSMUST00000124558 3642 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CiitaP79621 Gm21854-202ENSMUST00000190391 1480 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CiitaP79621 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms