Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Ift80-208ENSMUST00000169064 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Shmt1P50431 Olfr1281-202ENSMUST00000208176 4905 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
Shmt1P50431 Trbv19-201ENSMUST00000103276 566 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Shmt1P50431 Gm13103-202ENSMUST00000105768 994 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
Shmt1P50431 Gm14512-201ENSMUST00000117924 230 ntBASIC5.7□□□□□ -1.5
Shmt1P50431 Gm15659-201ENSMUST00000118881 341 ntBASIC5.7□□□□□ -1.5
Shmt1P50431 Gm14175-201ENSMUST00000119835 241 ntBASIC5.7□□□□□ -1.5
Shmt1P50431 Gm11359-201ENSMUST00000120039 567 ntBASIC5.7□□□□□ -1.5
Shmt1P50431 Gm15379-201ENSMUST00000121224 648 ntBASIC5.7□□□□□ -1.5
Shmt1P50431 Gm11677-201ENSMUST00000121349 977 ntBASIC5.7□□□□□ -1.5
Shmt1P50431 Gm12639-201ENSMUST00000121400 493 ntBASIC5.7□□□□□ -1.5
Shmt1P50431 Gm13007-201ENSMUST00000121866 365 ntBASIC5.7□□□□□ -1.5
Shmt1P50431 Gm17085-201ENSMUST00000165425 502 ntBASIC5.7□□□□□ -1.5
Shmt1P50431 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Shmt1P50431 Vmn2r-ps74-201ENSMUST00000174705 917 ntBASIC5.7□□□□□ -1.5
Shmt1P50431 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Shmt1P50431 Gm23186-201ENSMUST00000180078 107 ntBASIC5.7□□□□□ -1.5
Shmt1P50431 Gm27942-201ENSMUST00000184669 101 ntBASIC5.7□□□□□ -1.5
Shmt1P50431 Gm28489-201ENSMUST00000186655 316 ntBASIC5.7□□□□□ -1.5
Shmt1P50431 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC5.7□□□□□ -1.5
Shmt1P50431 Gm18036-201ENSMUST00000195256 272 ntBASIC5.7□□□□□ -1.5
Shmt1P50431 Obox4-ps5-201ENSMUST00000196368 397 ntBASIC5.7□□□□□ -1.5
Shmt1P50431 Obox4-ps10-201ENSMUST00000199376 504 ntBASIC5.7□□□□□ -1.5
Shmt1P50431 Gm9245-201ENSMUST00000200528 983 ntBASIC5.7□□□□□ -1.5
Shmt1P50431 Gm43698-202ENSMUST00000202864 555 ntTSL 3 BASIC5.7□□□□□ -1.5
Shmt1P50431 Gm44214-201ENSMUST00000204153 606 ntBASIC5.7□□□□□ -1.5
Shmt1P50431 Clec2f-202ENSMUST00000204981 657 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Shmt1P50431 Gm45639-201ENSMUST00000211205 710 ntTSL 5 BASIC5.7□□□□□ -1.5
Shmt1P50431 Gm18252-203ENSMUST00000215855 757 ntBASIC5.7□□□□□ -1.5
Shmt1P50431 CT486006.1-201ENSMUST00000216797 227 ntTSL 5 BASIC5.7□□□□□ -1.5
Shmt1P50431 Gm32526-201ENSMUST00000221878 981 ntBASIC5.7□□□□□ -1.5
Shmt1P50431 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC5.7□□□□□ -1.5
Shmt1P50431 Gm18388-201ENSMUST00000222339 557 ntBASIC5.7□□□□□ -1.5
Shmt1P50431 A930023M06Rik-201ENSMUST00000223270 1093 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Shmt1P50431 CT030182.2-201ENSMUST00000223569 620 ntBASIC5.7□□□□□ -1.5
Shmt1P50431 AC144628.1-201ENSMUST00000227943 466 ntBASIC5.7□□□□□ -1.5
Shmt1P50431 Anxa10-202ENSMUST00000034054 1222 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Shmt1P50431 Defa26-201ENSMUST00000074343 372 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Shmt1P50431 Gm23508-201ENSMUST00000083079 72 ntBASIC5.7□□□□□ -1.5
Shmt1P50431 Gm25139-201ENSMUST00000083247 210 ntBASIC5.7□□□□□ -1.5
Shmt1P50431 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC5.7□□□□□ -1.5
Shmt1P50431 AC169985.1-201ENSMUST00000223648 2439 ntBASIC5.7□□□□□ -1.5
Shmt1P50431 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Shmt1P50431 Gm37010-201ENSMUST00000194539 1704 ntBASIC5.7□□□□□ -1.5
Shmt1P50431 Gm43523-201ENSMUST00000197397 2878 ntBASIC5.7□□□□□ -1.5
Shmt1P50431 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Shmt1P50431 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Shmt1P50431 Amd1-201ENSMUST00000099945 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Shmt1P50431 AC190403.1-201ENSMUST00000224515 1325 ntBASIC5.7□□□□□ -1.5
Shmt1P50431 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Shmt1P50431 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC5.7□□□□□ -1.5
Shmt1P50431 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Shmt1P50431 Olfr1250-203ENSMUST00000215730 4632 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Shmt1P50431 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Shmt1P50431 Clca3a1-202ENSMUST00000059091 3524 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Shmt1P50431 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Shmt1P50431 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Shmt1P50431 Gm42998-201ENSMUST00000197053 2371 ntBASIC5.69□□□□□ -1.5
Shmt1P50431 Gm22273-201ENSMUST00000104040 132 ntBASIC5.69□□□□□ -1.5
Shmt1P50431 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Shmt1P50431 Gm15803-201ENSMUST00000120118 394 ntBASIC5.69□□□□□ -1.5
Shmt1P50431 Gm14898-201ENSMUST00000120202 645 ntBASIC5.69□□□□□ -1.5
Shmt1P50431 Gm7670-201ENSMUST00000121272 641 ntBASIC5.69□□□□□ -1.5
Shmt1P50431 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Shmt1P50431 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC5.69□□□□□ -1.5
Shmt1P50431 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Shmt1P50431 Olfr367-ps-202ENSMUST00000143957 942 ntBASIC5.69□□□□□ -1.5
Shmt1P50431 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Shmt1P50431 Gm24860-201ENSMUST00000158457 276 ntBASIC5.69□□□□□ -1.5
Shmt1P50431 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
Shmt1P50431 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC5.69□□□□□ -1.5
Shmt1P50431 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Shmt1P50431 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Shmt1P50431 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Shmt1P50431 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Shmt1P50431 Olfr1215-201ENSMUST00000188399 943 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Shmt1P50431 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Shmt1P50431 Gm7496-201ENSMUST00000192573 1034 ntBASIC5.69□□□□□ -1.5
Shmt1P50431 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC5.69□□□□□ -1.5
Shmt1P50431 Gm6057-201ENSMUST00000195927 314 ntBASIC5.69□□□□□ -1.5
Shmt1P50431 Gm43655-201ENSMUST00000197367 222 ntBASIC5.69□□□□□ -1.5
Shmt1P50431 Gm44330-201ENSMUST00000200106 143 ntBASIC5.69□□□□□ -1.5
Shmt1P50431 4930503L19Rik-202ENSMUST00000211817 913 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Shmt1P50431 AC171206.1-201ENSMUST00000213612 213 ntBASIC5.69□□□□□ -1.5
Shmt1P50431 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC5.69□□□□□ -1.5
Shmt1P50431 AC154846.2-201ENSMUST00000228805 424 ntBASIC5.69□□□□□ -1.5
Shmt1P50431 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC5.69□□□□□ -1.5
Shmt1P50431 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Shmt1P50431 Mir134-201ENSMUST00000083492 71 ntBASIC5.69□□□□□ -1.5
Shmt1P50431 Mir16-2-201ENSMUST00000083672 95 ntBASIC5.69□□□□□ -1.5
Shmt1P50431 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Shmt1P50431 Dach2-202ENSMUST00000113378 2089 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Shmt1P50431 Iqch-204ENSMUST00000163982 3375 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
Shmt1P50431 Gm37018-201ENSMUST00000192441 3869 ntBASIC5.69□□□□□ -1.5
Shmt1P50431 Gm8979-201ENSMUST00000183386 7296 ntBASIC5.69□□□□□ -1.5
Shmt1P50431 Senp8-202ENSMUST00000163586 3570 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
Shmt1P50431 Gm37356-201ENSMUST00000193362 1613 ntBASIC5.69□□□□□ -1.5
Shmt1P50431 Gm43333-201ENSMUST00000198340 2262 ntBASIC5.69□□□□□ -1.5
Shmt1P50431 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Shmt1P50431 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms