Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC5.38□□□□□ -1.55
Hoxd3P09027 Gm7838-201ENSMUST00000203221 1189 ntBASIC5.38□□□□□ -1.55
Hoxd3P09027 Gm44074-201ENSMUST00000204562 337 ntBASIC5.38□□□□□ -1.55
Hoxd3P09027 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Hoxd3P09027 AC153847.1-201ENSMUST00000214524 353 ntBASIC5.38□□□□□ -1.55
Hoxd3P09027 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC5.38□□□□□ -1.55
Hoxd3P09027 AC133207.3-201ENSMUST00000217694 464 ntTSL 3 BASIC5.38□□□□□ -1.55
Hoxd3P09027 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC5.38□□□□□ -1.55
Hoxd3P09027 Gm5928-201ENSMUST00000221839 466 ntBASIC5.38□□□□□ -1.55
Hoxd3P09027 AC159188.3-201ENSMUST00000224199 880 ntBASIC5.38□□□□□ -1.55
Hoxd3P09027 AC132260.1-201ENSMUST00000225499 734 ntBASIC5.38□□□□□ -1.55
Hoxd3P09027 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Hoxd3P09027 Magea6-201ENSMUST00000076986 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Hoxd3P09027 C230057A21Rik-201ENSMUST00000194944 3331 ntBASIC5.38□□□□□ -1.55
Hoxd3P09027 Tsr1-201ENSMUST00000045807 3389 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Hoxd3P09027 Serpinb9-201ENSMUST00000006391 3397 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Hoxd3P09027 Olfr373-203ENSMUST00000215198 3923 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Hoxd3P09027 Cyp4a31-201ENSMUST00000030480 2396 ntTSL 2 BASIC5.38□□□□□ -1.55
Hoxd3P09027 Gm136-201ENSMUST00000095129 1311 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Hoxd3P09027 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
Hoxd3P09027 AC117570.1-201ENSMUST00000214015 1886 ntTSL 5 BASIC5.38□□□□□ -1.55
Hoxd3P09027 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Hoxd3P09027 Gm12292-201ENSMUST00000122911 2433 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Hoxd3P09027 Dock7-214ENSMUST00000205650 6297 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
Hoxd3P09027 Gm42668-201ENSMUST00000200747 2487 ntBASIC5.38□□□□□ -1.55
Hoxd3P09027 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Hoxd3P09027 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Hoxd3P09027 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Hoxd3P09027 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Hoxd3P09027 Kif4-ps-201ENSMUST00000184686 3665 ntBASIC5.38□□□□□ -1.55
Hoxd3P09027 Tex28-202ENSMUST00000114328 1421 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Hoxd3P09027 Olfr310-202ENSMUST00000217724 1400 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Hoxd3P09027 Ank3-228ENSMUST00000182692 3833 ntTSL 5 BASIC5.38□□□□□ -1.55
Hoxd3P09027 Kmo-201ENSMUST00000040250 2695 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Hoxd3P09027 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Hoxd3P09027 Mapk8-205ENSMUST00000111945 5756 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Hoxd3P09027 Gm15102-201ENSMUST00000118740 1502 ntBASIC5.38□□□□□ -1.55
Hoxd3P09027 Olfr972-203ENSMUST00000216167 1522 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Hoxd3P09027 Zim1-201ENSMUST00000002336 7693 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Hoxd3P09027 Cyp2c66-201ENSMUST00000087234 1630 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Hoxd3P09027 Sncaip-206ENSMUST00000178678 3724 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Hoxd3P09027 Bbs12-201ENSMUST00000057975 2433 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
Hoxd3P09027 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Hoxd3P09027 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Hoxd3P09027 D5Ertd577e-202ENSMUST00000202481 2469 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Hoxd3P09027 Gm37999-201ENSMUST00000195178 1809 ntBASIC5.37□□□□□ -1.55
Hoxd3P09027 Psd3-206ENSMUST00000120071 9203 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Hoxd3P09027 Ogdh-203ENSMUST00000093350 4075 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Hoxd3P09027 AC131747.2-201ENSMUST00000226121 1895 ntBASIC5.37□□□□□ -1.55
Hoxd3P09027 Olfr60-203ENSMUST00000211031 2650 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
Hoxd3P09027 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Hoxd3P09027 Olfr60-204ENSMUST00000215023 2692 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Hoxd3P09027 Gm37653-201ENSMUST00000195401 3578 ntBASIC5.37□□□□□ -1.55
Hoxd3P09027 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Hoxd3P09027 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
Hoxd3P09027 Igkv3-5-201ENSMUST00000103400 382 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Hoxd3P09027 Gm25760-201ENSMUST00000103989 132 ntBASIC5.37□□□□□ -1.55
Hoxd3P09027 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC5.37□□□□□ -1.55
Hoxd3P09027 Gm12782-201ENSMUST00000117519 727 ntBASIC5.37□□□□□ -1.55
Hoxd3P09027 Gm14541-201ENSMUST00000118985 157 ntBASIC5.37□□□□□ -1.55
Hoxd3P09027 Gm14240-201ENSMUST00000120353 546 ntBASIC5.37□□□□□ -1.55
Hoxd3P09027 Gm11556-201ENSMUST00000120751 288 ntBASIC5.37□□□□□ -1.55
Hoxd3P09027 Gm14531-201ENSMUST00000120845 285 ntBASIC5.37□□□□□ -1.55
Hoxd3P09027 Gm15006-201ENSMUST00000121419 1122 ntBASIC5.37□□□□□ -1.55
Hoxd3P09027 Gm13345-201ENSMUST00000121928 228 ntBASIC5.37□□□□□ -1.55
Hoxd3P09027 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Hoxd3P09027 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC5.37□□□□□ -1.55
Hoxd3P09027 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Hoxd3P09027 4931413K12Rik-201ENSMUST00000142068 1282 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Hoxd3P09027 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC5.37□□□□□ -1.55
Hoxd3P09027 Gm16358-201ENSMUST00000146046 210 ntBASIC5.37□□□□□ -1.55
Hoxd3P09027 Gm25425-201ENSMUST00000157611 96 ntBASIC5.37□□□□□ -1.55
Hoxd3P09027 Gm24545-201ENSMUST00000158651 85 ntBASIC5.37□□□□□ -1.55
Hoxd3P09027 Gm17086-201ENSMUST00000171346 484 ntBASIC5.37□□□□□ -1.55
Hoxd3P09027 Gm20657-201ENSMUST00000177079 515 ntBASIC5.37□□□□□ -1.55
Hoxd3P09027 Gm24618-201ENSMUST00000177718 94 ntBASIC5.37□□□□□ -1.55
Hoxd3P09027 Gm23953-201ENSMUST00000178214 94 ntBASIC5.37□□□□□ -1.55
Hoxd3P09027 A630095N17Rik-201ENSMUST00000179573 648 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Hoxd3P09027 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Hoxd3P09027 Gm26332-201ENSMUST00000179813 94 ntBASIC5.37□□□□□ -1.55
Hoxd3P09027 Gm22863-201ENSMUST00000180265 94 ntBASIC5.37□□□□□ -1.55
Hoxd3P09027 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Hoxd3P09027 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Hoxd3P09027 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Hoxd3P09027 Gm8600-201ENSMUST00000186320 905 ntBASIC5.37□□□□□ -1.55
Hoxd3P09027 Gm18849-201ENSMUST00000189861 560 ntBASIC5.37□□□□□ -1.55
Hoxd3P09027 4930434B07Rik-201ENSMUST00000190254 1020 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Hoxd3P09027 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC5.37□□□□□ -1.55
Hoxd3P09027 Gm44342-201ENSMUST00000196874 129 ntBASIC5.37□□□□□ -1.55
Hoxd3P09027 Gm5050-201ENSMUST00000197164 775 ntBASIC5.37□□□□□ -1.55
Hoxd3P09027 Gm44383-201ENSMUST00000198940 129 ntBASIC5.37□□□□□ -1.55
Hoxd3P09027 Gm44011-201ENSMUST00000203336 394 ntBASIC5.37□□□□□ -1.55
Hoxd3P09027 1700110I07Rik-201ENSMUST00000205487 726 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Hoxd3P09027 Gm45157-201ENSMUST00000208729 401 ntBASIC5.37□□□□□ -1.55
Hoxd3P09027 1700021G15Rik-201ENSMUST00000217671 528 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Hoxd3P09027 CT009527.2-201ENSMUST00000225386 606 ntBASIC5.37□□□□□ -1.55
Hoxd3P09027 AC164436.1-201ENSMUST00000227074 772 ntBASIC5.37□□□□□ -1.55
Hoxd3P09027 AC120553.1-201ENSMUST00000227313 260 ntBASIC5.37□□□□□ -1.55
Hoxd3P09027 Cox7b-201ENSMUST00000033582 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Hoxd3P09027 Olfr462-203ENSMUST00000213928 5598 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms