Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm12735-201ENSMUST00000146218 651 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Col6a4A2AX52 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC3.83□□□□□ -1.8
Col6a4A2AX52 Gm23554-201ENSMUST00000157818 110 ntBASIC3.83□□□□□ -1.8
Col6a4A2AX52 Gm17149-201ENSMUST00000164712 375 ntBASIC3.83□□□□□ -1.8
Col6a4A2AX52 Gm28492-201ENSMUST00000190899 1019 ntBASIC3.83□□□□□ -1.8
Col6a4A2AX52 Gm36971-201ENSMUST00000195244 378 ntTSL 5 BASIC3.83□□□□□ -1.8
Col6a4A2AX52 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
Col6a4A2AX52 Gm44485-201ENSMUST00000199569 137 ntBASIC3.83□□□□□ -1.8
Col6a4A2AX52 Gm44079-201ENSMUST00000204889 529 ntTSL 5 BASIC3.83□□□□□ -1.8
Col6a4A2AX52 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Col6a4A2AX52 Olfr1467-201ENSMUST00000054687 927 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Col6a4A2AX52 Olfr830-201ENSMUST00000078861 948 ntAPPRIS P2 BASIC3.83□□□□□ -1.8
Col6a4A2AX52 Zfa-ps-201ENSMUST00000180526 2231 ntBASIC3.83□□□□□ -1.8
Col6a4A2AX52 Fat3-201ENSMUST00000082170 18456 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Col6a4A2AX52 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Col6a4A2AX52 Cept1-201ENSMUST00000039153 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Col6a4A2AX52 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
Col6a4A2AX52 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
Col6a4A2AX52 Gm43844-201ENSMUST00000202926 5605 ntBASIC3.82□□□□□ -1.8
Col6a4A2AX52 Spata1-206ENSMUST00000197980 1807 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Col6a4A2AX52 Tmem45a-201ENSMUST00000023435 2701 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Col6a4A2AX52 Gm13172-201ENSMUST00000118685 256 ntBASIC3.82□□□□□ -1.8
Col6a4A2AX52 Gm14564-201ENSMUST00000122159 294 ntBASIC3.82□□□□□ -1.8
Col6a4A2AX52 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC3.82□□□□□ -1.8
Col6a4A2AX52 Gm22243-201ENSMUST00000178754 120 ntBASIC3.82□□□□□ -1.8
Col6a4A2AX52 Gm16892-201ENSMUST00000180999 1726 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Col6a4A2AX52 Gm26745-201ENSMUST00000181022 1874 ntTSL 5 BASIC3.82□□□□□ -1.8
Col6a4A2AX52 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC3.82□□□□□ -1.8
Col6a4A2AX52 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC3.82□□□□□ -1.8
Col6a4A2AX52 Gm19134-201ENSMUST00000221203 487 ntBASIC3.82□□□□□ -1.8
Col6a4A2AX52 Prl2c2-203ENSMUST00000221612 596 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Col6a4A2AX52 Olfr205-201ENSMUST00000074125 990 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Col6a4A2AX52 Olfr670-202ENSMUST00000214216 3729 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Col6a4A2AX52 Ccnb2-ps-202ENSMUST00000170898 2296 ntBASIC3.82□□□□□ -1.8
Col6a4A2AX52 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Col6a4A2AX52 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Col6a4A2AX52 Fscb-201ENSMUST00000059833 3361 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Col6a4A2AX52 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC3.82□□□□□ -1.8
Col6a4A2AX52 Gm13057-201ENSMUST00000105776 2093 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Col6a4A2AX52 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Col6a4A2AX52 Sult2a5-201ENSMUST00000108525 1046 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Col6a4A2AX52 Gm23228-201ENSMUST00000157296 270 ntBASIC3.82□□□□□ -1.8
Col6a4A2AX52 Gm26404-201ENSMUST00000158498 109 ntBASIC3.82□□□□□ -1.8
Col6a4A2AX52 Olfr879-ps1-201ENSMUST00000212455 694 ntBASIC3.82□□□□□ -1.8
Col6a4A2AX52 Olfr597-201ENSMUST00000098203 948 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Col6a4A2AX52 Olfr884-202ENSMUST00000181088 3185 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
Col6a4A2AX52 Gm15182-201ENSMUST00000120832 1676 ntBASIC3.82□□□□□ -1.8
Col6a4A2AX52 Pnpla8-201ENSMUST00000043082 13507 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
Col6a4A2AX52 Olfr481-202ENSMUST00000213601 5247 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Col6a4A2AX52 A730046J19Rik-201ENSMUST00000135687 4707 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Col6a4A2AX52 Gm37749-201ENSMUST00000193917 1899 ntBASIC3.81□□□□□ -1.8
Col6a4A2AX52 Rgs17-202ENSMUST00000064225 8191 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Col6a4A2AX52 Naa16-201ENSMUST00000022597 13223 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Col6a4A2AX52 Obscn-202ENSMUST00000047441 24175 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Col6a4A2AX52 Phospho2-206ENSMUST00000180290 3267 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Col6a4A2AX52 AI838599-201ENSMUST00000133960 2953 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Col6a4A2AX52 Amd-ps1-201ENSMUST00000120127 994 ntBASIC3.81□□□□□ -1.8
Col6a4A2AX52 Gm13484-201ENSMUST00000120738 412 ntBASIC3.81□□□□□ -1.8
Col6a4A2AX52 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Col6a4A2AX52 Gm45574-201ENSMUST00000210921 331 ntBASIC3.81□□□□□ -1.8
Col6a4A2AX52 Olfr1133-202ENSMUST00000217368 993 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Col6a4A2AX52 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
Col6a4A2AX52 Ear6-201ENSMUST00000074477 713 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Col6a4A2AX52 Olfr782-201ENSMUST00000077024 945 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Col6a4A2AX52 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
Col6a4A2AX52 Lgi1-206ENSMUST00000198045 1483 ntTSL 5 BASIC3.81□□□□□ -1.8
Col6a4A2AX52 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Col6a4A2AX52 Vmn2r6-201ENSMUST00000165012 2484 ntAPPRIS P2 TSL 5 BASIC3.81□□□□□ -1.8
Col6a4A2AX52 Vmn2r7-203ENSMUST00000168072 2484 ntAPPRIS P2 TSL 5 BASIC3.81□□□□□ -1.8
Col6a4A2AX52 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Col6a4A2AX52 AC164092.3-201ENSMUST00000216970 1323 ntBASIC3.81□□□□□ -1.8
Col6a4A2AX52 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Col6a4A2AX52 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC3.81□□□□□ -1.8
Col6a4A2AX52 Gm43000-201ENSMUST00000198482 3343 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Col6a4A2AX52 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
Col6a4A2AX52 Gm45884-201ENSMUST00000209540 3416 ntBASIC3.81□□□□□ -1.8
Col6a4A2AX52 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
Col6a4A2AX52 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
Col6a4A2AX52 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Col6a4A2AX52 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC3.81□□□□□ -1.8
Col6a4A2AX52 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Col6a4A2AX52 Gm23743-201ENSMUST00000157389 274 ntBASIC3.81□□□□□ -1.8
Col6a4A2AX52 Gm4675-201ENSMUST00000163396 502 ntTSL 3 BASIC3.81□□□□□ -1.8
Col6a4A2AX52 Gm3191-201ENSMUST00000167139 346 ntBASIC3.81□□□□□ -1.8
Col6a4A2AX52 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
Col6a4A2AX52 Gm23638-201ENSMUST00000175073 126 ntBASIC3.81□□□□□ -1.8
Col6a4A2AX52 Gm23158-201ENSMUST00000175076 126 ntBASIC3.81□□□□□ -1.8
Col6a4A2AX52 Gm22907-201ENSMUST00000175198 126 ntBASIC3.81□□□□□ -1.8
Col6a4A2AX52 Gm22625-201ENSMUST00000175382 126 ntBASIC3.81□□□□□ -1.8
Col6a4A2AX52 Gm22875-201ENSMUST00000175449 126 ntBASIC3.81□□□□□ -1.8
Col6a4A2AX52 Gm25197-201ENSMUST00000175516 126 ntBASIC3.81□□□□□ -1.8
Col6a4A2AX52 Gm27857-201ENSMUST00000176930 126 ntBASIC3.81□□□□□ -1.8
Col6a4A2AX52 Gm26268-201ENSMUST00000177685 126 ntBASIC3.81□□□□□ -1.8
Col6a4A2AX52 Gm23681-201ENSMUST00000178821 126 ntBASIC3.81□□□□□ -1.8
Col6a4A2AX52 Gm37220-201ENSMUST00000195179 415 ntTSL 5 BASIC3.81□□□□□ -1.8
Col6a4A2AX52 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Col6a4A2AX52 Olfr99-201ENSMUST00000077585 918 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Col6a4A2AX52 Mir338-201ENSMUST00000083666 98 ntBASIC3.81□□□□□ -1.8
Col6a4A2AX52 Obp1b-201ENSMUST00000088198 797 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Col6a4A2AX52 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms