Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Nsa2-201ENSMUST00000073456 2700 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Scn3aA2ASI5 Gm44224-201ENSMUST00000204131 1463 ntBASIC5.04□□□□□ -1.6
Scn3aA2ASI5 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Scn3aA2ASI5 Gm44742-201ENSMUST00000207190 1412 ntBASIC5.04□□□□□ -1.6
Scn3aA2ASI5 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC5.04□□□□□ -1.6
Scn3aA2ASI5 Olfr487-202ENSMUST00000216489 3785 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Scn3aA2ASI5 Gabra6-201ENSMUST00000020703 2436 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
Scn3aA2ASI5 Gm8660-201ENSMUST00000105187 918 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Scn3aA2ASI5 Vmn1r120-201ENSMUST00000105202 918 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Scn3aA2ASI5 Gm5728-201ENSMUST00000105209 918 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Scn3aA2ASI5 Gm16180-201ENSMUST00000128662 312 ntTSL 3 BASIC5.03□□□□□ -1.6
Scn3aA2ASI5 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Scn3aA2ASI5 Gm21816-201ENSMUST00000179255 360 ntBASIC5.03□□□□□ -1.6
Scn3aA2ASI5 Gm30280-201ENSMUST00000192214 262 ntBASIC5.03□□□□□ -1.6
Scn3aA2ASI5 Gm38326-201ENSMUST00000194030 686 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Scn3aA2ASI5 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC5.03□□□□□ -1.6
Scn3aA2ASI5 Gm18377-201ENSMUST00000215141 607 ntBASIC5.03□□□□□ -1.6
Scn3aA2ASI5 9430031K09Rik-201ENSMUST00000222913 925 ntBASIC5.03□□□□□ -1.6
Scn3aA2ASI5 Cst12-201ENSMUST00000028932 644 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Scn3aA2ASI5 Gm5689-201ENSMUST00000041389 294 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Scn3aA2ASI5 Olfr205-201ENSMUST00000074125 990 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Scn3aA2ASI5 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Scn3aA2ASI5 Vmn1r210-202ENSMUST00000226180 3116 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Scn3aA2ASI5 Olfr1252-202ENSMUST00000213196 3331 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Scn3aA2ASI5 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Scn3aA2ASI5 2900018N21Rik-201ENSMUST00000195805 1580 ntBASIC5.03□□□□□ -1.6
Scn3aA2ASI5 AC144772.3-201ENSMUST00000228829 3126 ntBASIC5.03□□□□□ -1.6
Scn3aA2ASI5 Lrriq3-203ENSMUST00000194376 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Scn3aA2ASI5 Cpa6-201ENSMUST00000035577 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Scn3aA2ASI5 Lrrc51-207ENSMUST00000106967 675 ntTSL 3 BASIC5.03□□□□□ -1.6
Scn3aA2ASI5 Gm13567-201ENSMUST00000118026 247 ntBASIC5.03□□□□□ -1.6
Scn3aA2ASI5 Gm4912-201ENSMUST00000122212 1044 ntBASIC5.03□□□□□ -1.6
Scn3aA2ASI5 n-R5s201-201ENSMUST00000122622 116 ntBASIC5.03□□□□□ -1.6
Scn3aA2ASI5 Gm12909-201ENSMUST00000134190 620 ntTSL 2 BASIC5.03□□□□□ -1.6
Scn3aA2ASI5 Gm24224-201ENSMUST00000158828 258 ntBASIC5.03□□□□□ -1.6
Scn3aA2ASI5 Malat1-203ENSMUST00000173499 485 ntTSL 3 BASIC5.03□□□□□ -1.6
Scn3aA2ASI5 Gm19898-201ENSMUST00000177490 251 ntBASIC5.03□□□□□ -1.6
Scn3aA2ASI5 Trav7-5-201ENSMUST00000200609 337 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Scn3aA2ASI5 4930458B22Rik-201ENSMUST00000209339 754 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Scn3aA2ASI5 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC5.03□□□□□ -1.6
Scn3aA2ASI5 Olfr453-201ENSMUST00000053647 954 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Scn3aA2ASI5 Vmn1r234-201ENSMUST00000079633 990 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Scn3aA2ASI5 Spink12-201ENSMUST00000081271 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Scn3aA2ASI5 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Scn3aA2ASI5 Gm37114-201ENSMUST00000195065 1804 ntBASIC5.03□□□□□ -1.6
Scn3aA2ASI5 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
Scn3aA2ASI5 Svet1-201ENSMUST00000209370 3940 ntBASIC5.02□□□□□ -1.61
Scn3aA2ASI5 Tmem45a-201ENSMUST00000023435 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Scn3aA2ASI5 Zfp119b-202ENSMUST00000189452 2078 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Scn3aA2ASI5 Fap-202ENSMUST00000102732 2751 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Scn3aA2ASI5 Gm14172-201ENSMUST00000118255 644 ntBASIC5.02□□□□□ -1.61
Scn3aA2ASI5 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC5.02□□□□□ -1.61
Scn3aA2ASI5 Gm22613-201ENSMUST00000122679 292 ntBASIC5.02□□□□□ -1.61
Scn3aA2ASI5 Gm22536-201ENSMUST00000158171 134 ntBASIC5.02□□□□□ -1.61
Scn3aA2ASI5 Gm28889-201ENSMUST00000185350 959 ntTSL 5 BASIC5.02□□□□□ -1.61
Scn3aA2ASI5 Gm4854-201ENSMUST00000185902 574 ntBASIC5.02□□□□□ -1.61
Scn3aA2ASI5 Gm29426-202ENSMUST00000186564 536 ntTSL 5 BASIC5.02□□□□□ -1.61
Scn3aA2ASI5 Gm29133-201ENSMUST00000189155 885 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Scn3aA2ASI5 Gm17951-201ENSMUST00000198536 496 ntBASIC5.02□□□□□ -1.61
Scn3aA2ASI5 CR974429.1-201ENSMUST00000220877 827 ntBASIC5.02□□□□□ -1.61
Scn3aA2ASI5 Vmn1r236-201ENSMUST00000066998 1121 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Scn3aA2ASI5 Vmn1r202-201ENSMUST00000078642 909 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Scn3aA2ASI5 Olfr493-201ENSMUST00000080106 945 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Scn3aA2ASI5 4921529L05Rik-201ENSMUST00000203047 1997 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Scn3aA2ASI5 Olfr535-204ENSMUST00000214296 5120 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Scn3aA2ASI5 AC120375.2-201ENSMUST00000226532 1853 ntBASIC5.02□□□□□ -1.61
Scn3aA2ASI5 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Scn3aA2ASI5 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
Scn3aA2ASI5 Olfr1377-203ENSMUST00000216101 1990 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
Scn3aA2ASI5 Snora64-201ENSMUST00000104521 134 ntBASIC5.01□□□□□ -1.61
Scn3aA2ASI5 Gm16394-201ENSMUST00000117289 675 ntBASIC5.01□□□□□ -1.61
Scn3aA2ASI5 Gm11698-201ENSMUST00000117948 455 ntBASIC5.01□□□□□ -1.61
Scn3aA2ASI5 Gm14619-201ENSMUST00000120480 168 ntBASIC5.01□□□□□ -1.61
Scn3aA2ASI5 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC5.01□□□□□ -1.61
Scn3aA2ASI5 Gm8200-201ENSMUST00000122390 222 ntBASIC5.01□□□□□ -1.61
Scn3aA2ASI5 Gm22453-201ENSMUST00000122801 318 ntBASIC5.01□□□□□ -1.61
Scn3aA2ASI5 Gm22214-201ENSMUST00000157563 172 ntBASIC5.01□□□□□ -1.61
Scn3aA2ASI5 4430402I18Rik-203ENSMUST00000160542 1057 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Scn3aA2ASI5 Gm16558-201ENSMUST00000163015 532 ntBASIC5.01□□□□□ -1.61
Scn3aA2ASI5 Gm37966-201ENSMUST00000193122 326 ntBASIC5.01□□□□□ -1.61
Scn3aA2ASI5 Vmn1r28-203ENSMUST00000228678 909 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Scn3aA2ASI5 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Scn3aA2ASI5 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Scn3aA2ASI5 Gm45211-201ENSMUST00000206208 2650 ntBASIC5.01□□□□□ -1.61
Scn3aA2ASI5 Gm13550-201ENSMUST00000118185 525 ntBASIC5.01□□□□□ -1.61
Scn3aA2ASI5 Igfl3-201ENSMUST00000152973 575 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Scn3aA2ASI5 Vmn2r-ps72-201ENSMUST00000172586 907 ntBASIC5.01□□□□□ -1.61
Scn3aA2ASI5 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC5.01□□□□□ -1.61
Scn3aA2ASI5 Mir6414-201ENSMUST00000183685 82 ntBASIC5.01□□□□□ -1.61
Scn3aA2ASI5 Gm3259-205ENSMUST00000185432 1077 ntTSL 3 BASIC5.01□□□□□ -1.61
Scn3aA2ASI5 Gm29428-201ENSMUST00000190086 409 ntBASIC5.01□□□□□ -1.61
Scn3aA2ASI5 AC133189.1-201ENSMUST00000198820 140 ntBASIC5.01□□□□□ -1.61
Scn3aA2ASI5 AC154305.1-201ENSMUST00000224443 450 ntBASIC5.01□□□□□ -1.61
Scn3aA2ASI5 AC154592.1-201ENSMUST00000225784 574 ntBASIC5.01□□□□□ -1.61
Scn3aA2ASI5 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Scn3aA2ASI5 Clca4c-ps-201ENSMUST00000098551 712 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Scn3aA2ASI5 Mlip-205ENSMUST00000183955 3069 ntAPPRIS P5 TSL 5 BASIC5.01□□□□□ -1.61
Scn3aA2ASI5 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Scn3aA2ASI5 AC142245.1-201ENSMUST00000226611 1505 ntBASIC5.01□□□□□ -1.61
Scn3aA2ASI5 Adgb-206ENSMUST00000208717 4902 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms