Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Acer3-201ENSMUST00000033020 11340 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Scn1aA2APX8 Gm14563-201ENSMUST00000120571 354 ntBASIC4.69□□□□□ -1.66
Scn1aA2APX8 Gm4852-201ENSMUST00000121202 729 ntBASIC4.69□□□□□ -1.66
Scn1aA2APX8 Gm14410-202ENSMUST00000133301 1113 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
Scn1aA2APX8 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC4.69□□□□□ -1.66
Scn1aA2APX8 Gm23496-201ENSMUST00000157741 248 ntBASIC4.69□□□□□ -1.66
Scn1aA2APX8 Gm22211-201ENSMUST00000158097 156 ntBASIC4.69□□□□□ -1.66
Scn1aA2APX8 Gm24939-201ENSMUST00000158325 137 ntBASIC4.69□□□□□ -1.66
Scn1aA2APX8 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Scn1aA2APX8 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Scn1aA2APX8 Gm20701-201ENSMUST00000176082 347 ntBASIC4.69□□□□□ -1.66
Scn1aA2APX8 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Scn1aA2APX8 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC4.69□□□□□ -1.66
Scn1aA2APX8 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Scn1aA2APX8 Mir6537-201ENSMUST00000184150 110 ntBASIC4.69□□□□□ -1.66
Scn1aA2APX8 Gm29479-201ENSMUST00000190352 455 ntBASIC4.69□□□□□ -1.66
Scn1aA2APX8 Ighv10-4-201ENSMUST00000193702 299 ntBASIC4.69□□□□□ -1.66
Scn1aA2APX8 Gm5288-201ENSMUST00000198323 1119 ntBASIC4.69□□□□□ -1.66
Scn1aA2APX8 Gm43580-201ENSMUST00000202892 284 ntBASIC4.69□□□□□ -1.66
Scn1aA2APX8 Gm4602-201ENSMUST00000203198 308 ntBASIC4.69□□□□□ -1.66
Scn1aA2APX8 Olfr1496-203ENSMUST00000219412 1067 ntAPPRIS P2 BASIC4.69□□□□□ -1.66
Scn1aA2APX8 AC132446.1-201ENSMUST00000222655 226 ntBASIC4.69□□□□□ -1.66
Scn1aA2APX8 Cypt3-201ENSMUST00000056754 666 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
Scn1aA2APX8 Olfr1496-201ENSMUST00000057390 1067 ntAPPRIS ALT1 BASIC4.69□□□□□ -1.66
Scn1aA2APX8 Prl3d2-201ENSMUST00000080755 853 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
Scn1aA2APX8 Gm13212-203ENSMUST00000119718 2498 ntTSL 5 BASIC4.69□□□□□ -1.66
Scn1aA2APX8 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Scn1aA2APX8 Gabrb1-201ENSMUST00000031122 13737 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Scn1aA2APX8 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Scn1aA2APX8 Zc4h2-203ENSMUST00000120620 2156 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Scn1aA2APX8 Olfr1196-202ENSMUST00000216928 4270 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Scn1aA2APX8 Olfr1081-ps1-201ENSMUST00000120210 945 ntBASIC4.68□□□□□ -1.66
Scn1aA2APX8 Olfr660-ps1-201ENSMUST00000121526 375 ntBASIC4.68□□□□□ -1.66
Scn1aA2APX8 Gm12807-201ENSMUST00000121546 962 ntBASIC4.68□□□□□ -1.66
Scn1aA2APX8 Gm20239-201ENSMUST00000196610 982 ntBASIC4.68□□□□□ -1.66
Scn1aA2APX8 Gm5338-201ENSMUST00000209530 639 ntBASIC4.68□□□□□ -1.66
Scn1aA2APX8 Gm7807-201ENSMUST00000212475 578 ntBASIC4.68□□□□□ -1.66
Scn1aA2APX8 AC154738.5-201ENSMUST00000227397 310 ntBASIC4.68□□□□□ -1.66
Scn1aA2APX8 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Scn1aA2APX8 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Scn1aA2APX8 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
Scn1aA2APX8 Gm38057-201ENSMUST00000195551 3203 ntBASIC4.68□□□□□ -1.66
Scn1aA2APX8 Gm44433-201ENSMUST00000203540 4832 ntBASIC4.68□□□□□ -1.66
Scn1aA2APX8 Gm43781-201ENSMUST00000197634 2681 ntBASIC4.68□□□□□ -1.66
Scn1aA2APX8 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Scn1aA2APX8 Gm44434-201ENSMUST00000203918 3745 ntBASIC4.68□□□□□ -1.66
Scn1aA2APX8 Phf11d-201ENSMUST00000095157 2666 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Scn1aA2APX8 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Scn1aA2APX8 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Scn1aA2APX8 AC158605.2-201ENSMUST00000220287 2726 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
Scn1aA2APX8 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Scn1aA2APX8 Casp8ap2-202ENSMUST00000108178 1189 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
Scn1aA2APX8 Gm2165-201ENSMUST00000124609 1118 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Scn1aA2APX8 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC4.68□□□□□ -1.66
Scn1aA2APX8 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC4.68□□□□□ -1.66
Scn1aA2APX8 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Scn1aA2APX8 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC4.68□□□□□ -1.66
Scn1aA2APX8 Gm2101-204ENSMUST00000137421 1118 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Scn1aA2APX8 Gm3669-205ENSMUST00000144018 1118 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Scn1aA2APX8 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Scn1aA2APX8 Gm25447-201ENSMUST00000158997 128 ntBASIC4.68□□□□□ -1.66
Scn1aA2APX8 Gm16545-201ENSMUST00000161968 463 ntBASIC4.68□□□□□ -1.66
Scn1aA2APX8 Gm29133-201ENSMUST00000189155 885 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Scn1aA2APX8 Gm37088-201ENSMUST00000193887 406 ntBASIC4.68□□□□□ -1.66
Scn1aA2APX8 Cycs-ps2-201ENSMUST00000197114 292 ntBASIC4.68□□□□□ -1.66
Scn1aA2APX8 Gm18452-201ENSMUST00000202968 1111 ntBASIC4.68□□□□□ -1.66
Scn1aA2APX8 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC4.68□□□□□ -1.66
Scn1aA2APX8 Vmn1r236-201ENSMUST00000066998 1121 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Scn1aA2APX8 Gm43527-201ENSMUST00000198749 3178 ntBASIC4.68□□□□□ -1.66
Scn1aA2APX8 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Scn1aA2APX8 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC4.68□□□□□ -1.66
Scn1aA2APX8 Olfr672-202ENSMUST00000213942 1490 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
Scn1aA2APX8 Abca16-202ENSMUST00000120490 5088 ntAPPRIS P5 TSL 5 BASIC4.67□□□□□ -1.66
Scn1aA2APX8 Gm42551-201ENSMUST00000197701 1573 ntBASIC4.67□□□□□ -1.66
Scn1aA2APX8 Vmn2r102-201ENSMUST00000171741 2574 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Scn1aA2APX8 Abca12-201ENSMUST00000087268 9137 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Scn1aA2APX8 Fat1-203ENSMUST00000189017 14651 ntTSL 5 BASIC4.67□□□□□ -1.66
Scn1aA2APX8 Gm8666-201ENSMUST00000117517 292 ntBASIC4.67□□□□□ -1.66
Scn1aA2APX8 Gm14742-201ENSMUST00000148284 381 ntTSL 3 BASIC4.67□□□□□ -1.66
Scn1aA2APX8 Reg3d-202ENSMUST00000167492 644 ntTSL 5 BASIC4.67□□□□□ -1.66
Scn1aA2APX8 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC4.67□□□□□ -1.66
Scn1aA2APX8 Gm27805-201ENSMUST00000184513 79 ntBASIC4.67□□□□□ -1.66
Scn1aA2APX8 Gm27286-201ENSMUST00000184934 179 ntBASIC4.67□□□□□ -1.66
Scn1aA2APX8 2010005H15Rik-202ENSMUST00000187183 639 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Scn1aA2APX8 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Scn1aA2APX8 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC4.67□□□□□ -1.66
Scn1aA2APX8 Gm18462-201ENSMUST00000208112 417 ntBASIC4.67□□□□□ -1.66
Scn1aA2APX8 Gm45434-201ENSMUST00000210550 293 ntBASIC4.67□□□□□ -1.66
Scn1aA2APX8 Gm9655-201ENSMUST00000211321 1284 ntBASIC4.67□□□□□ -1.66
Scn1aA2APX8 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC4.67□□□□□ -1.66
Scn1aA2APX8 Olfr1325-201ENSMUST00000054541 948 ntAPPRIS P2 BASIC4.67□□□□□ -1.66
Scn1aA2APX8 Reg3d-201ENSMUST00000089667 782 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Scn1aA2APX8 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Scn1aA2APX8 Gm42548-201ENSMUST00000202669 3933 ntBASIC4.67□□□□□ -1.66
Scn1aA2APX8 Vmn1r213-202ENSMUST00000227573 3515 ntAPPRIS ALT2 BASIC4.67□□□□□ -1.66
Scn1aA2APX8 AC168056.3-201ENSMUST00000225395 2540 ntBASIC4.67□□□□□ -1.66
Scn1aA2APX8 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC4.67□□□□□ -1.66
Scn1aA2APX8 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Scn1aA2APX8 Tor1aip1-210ENSMUST00000169241 3716 ntAPPRIS ALT2 TSL 3 BASIC4.67□□□□□ -1.66
Scn1aA2APX8 Plch1-209ENSMUST00000161052 1472 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms