Protein–RNA interactions for Protein: A2APF3

Ctcfl, Transcriptional repressor CTCFL, mousemouse

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcflA2APF3 Gm21633-202ENSMUST00000186630 174 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CtcflA2APF3 Gm28890-201ENSMUST00000186686 173 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CtcflA2APF3 Gm28092-201ENSMUST00000186709 174 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CtcflA2APF3 Gm28566-201ENSMUST00000186714 484 ntBASIC4.32□□□□□ -1.72
CtcflA2APF3 Gm21572-202ENSMUST00000186850 174 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CtcflA2APF3 Gm21916-202ENSMUST00000187044 174 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CtcflA2APF3 Gm29839-201ENSMUST00000187045 174 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CtcflA2APF3 Gm28442-201ENSMUST00000187052 174 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CtcflA2APF3 Gm21780-202ENSMUST00000187110 174 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CtcflA2APF3 Gm29656-201ENSMUST00000187236 174 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CtcflA2APF3 Gm21821-202ENSMUST00000187288 175 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CtcflA2APF3 Gm28886-201ENSMUST00000187350 174 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CtcflA2APF3 Gm21599-202ENSMUST00000187381 174 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CtcflA2APF3 Gm28128-201ENSMUST00000187403 174 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CtcflA2APF3 Gm21450-201ENSMUST00000187408 174 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CtcflA2APF3 Gm28194-201ENSMUST00000187412 484 ntBASIC4.32□□□□□ -1.72
CtcflA2APF3 Gm28689-201ENSMUST00000187441 174 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CtcflA2APF3 Gm28851-201ENSMUST00000187800 174 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CtcflA2APF3 Gm28886-202ENSMUST00000187889 484 ntBASIC4.32□□□□□ -1.72
CtcflA2APF3 Gm28554-201ENSMUST00000187964 174 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CtcflA2APF3 Gm28984-201ENSMUST00000188202 174 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CtcflA2APF3 Gm21529-202ENSMUST00000188473 174 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CtcflA2APF3 Gm28468-201ENSMUST00000188536 615 ntBASIC4.32□□□□□ -1.72
CtcflA2APF3 Gm28604-202ENSMUST00000188638 174 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CtcflA2APF3 Gm21588-202ENSMUST00000188721 174 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CtcflA2APF3 Gm21539-202ENSMUST00000188764 174 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CtcflA2APF3 Gm28216-201ENSMUST00000188785 174 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CtcflA2APF3 Gm29645-201ENSMUST00000189117 174 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CtcflA2APF3 Gm28554-202ENSMUST00000189175 484 ntBASIC4.32□□□□□ -1.72
CtcflA2APF3 Gm21413-201ENSMUST00000189224 174 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CtcflA2APF3 Gm21723-202ENSMUST00000189444 174 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CtcflA2APF3 Gm36782-201ENSMUST00000189459 174 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CtcflA2APF3 Gm21419-201ENSMUST00000189495 173 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CtcflA2APF3 Gm28566-202ENSMUST00000189532 174 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CtcflA2APF3 Gm29213-202ENSMUST00000189703 484 ntBASIC4.32□□□□□ -1.72
CtcflA2APF3 Gm21626-202ENSMUST00000189751 174 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CtcflA2APF3 Gm28851-202ENSMUST00000189757 484 ntBASIC4.32□□□□□ -1.72
CtcflA2APF3 Gm28656-201ENSMUST00000190017 174 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CtcflA2APF3 Gm28461-201ENSMUST00000190023 484 ntBASIC4.32□□□□□ -1.72
CtcflA2APF3 Gm21562-202ENSMUST00000190314 174 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CtcflA2APF3 Gm28517-201ENSMUST00000190343 174 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CtcflA2APF3 Gm29531-201ENSMUST00000190569 174 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CtcflA2APF3 Gm21914-202ENSMUST00000190577 174 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CtcflA2APF3 Gm20978-201ENSMUST00000190688 174 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CtcflA2APF3 Gm20963-201ENSMUST00000190880 174 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CtcflA2APF3 Gm29316-201ENSMUST00000190953 174 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CtcflA2APF3 Gm29351-201ENSMUST00000191052 174 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CtcflA2APF3 Gm29466-201ENSMUST00000191077 174 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CtcflA2APF3 Gm20987-201ENSMUST00000191165 174 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CtcflA2APF3 Gm28194-202ENSMUST00000191217 174 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CtcflA2APF3 Gm28461-202ENSMUST00000191406 174 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CtcflA2APF3 Gm37927-201ENSMUST00000192238 174 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CtcflA2APF3 Gm37544-201ENSMUST00000192803 174 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CtcflA2APF3 Gm37635-201ENSMUST00000193129 174 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CtcflA2APF3 Gm21809-202ENSMUST00000194072 174 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CtcflA2APF3 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CtcflA2APF3 Gm19201-201ENSMUST00000210127 778 ntBASIC4.32□□□□□ -1.72
CtcflA2APF3 Gm45574-201ENSMUST00000210921 331 ntBASIC4.32□□□□□ -1.72
CtcflA2APF3 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CtcflA2APF3 AC151971.3-201ENSMUST00000214694 404 ntBASIC4.32□□□□□ -1.72
CtcflA2APF3 AC110381.1-201ENSMUST00000218987 586 ntBASIC4.32□□□□□ -1.72
CtcflA2APF3 CT030182.2-201ENSMUST00000223569 620 ntBASIC4.32□□□□□ -1.72
CtcflA2APF3 AC154436.2-201ENSMUST00000227408 208 ntBASIC4.32□□□□□ -1.72
CtcflA2APF3 Gnrhr-201ENSMUST00000031172 1211 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CtcflA2APF3 Sult1e1-201ENSMUST00000031201 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CtcflA2APF3 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CtcflA2APF3 Gm22423-201ENSMUST00000082861 184 ntBASIC4.32□□□□□ -1.72
CtcflA2APF3 Mir449a-201ENSMUST00000083641 91 ntBASIC4.32□□□□□ -1.72
CtcflA2APF3 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
CtcflA2APF3 Tsga10-203ENSMUST00000114902 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CtcflA2APF3 Gm9343-201ENSMUST00000209016 2609 ntBASIC4.32□□□□□ -1.72
CtcflA2APF3 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
CtcflA2APF3 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CtcflA2APF3 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
CtcflA2APF3 Gm43319-201ENSMUST00000198036 2270 ntBASIC4.32□□□□□ -1.72
CtcflA2APF3 AC187103.2-201ENSMUST00000223605 1617 ntBASIC4.32□□□□□ -1.72
CtcflA2APF3 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CtcflA2APF3 Spag17-204ENSMUST00000164539 7862 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
CtcflA2APF3 Gm42728-201ENSMUST00000202644 1552 ntBASIC4.31□□□□□ -1.72
CtcflA2APF3 Olfr1298-202ENSMUST00000208284 1563 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
CtcflA2APF3 Gm38069-201ENSMUST00000195360 2144 ntBASIC4.31□□□□□ -1.72
CtcflA2APF3 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
CtcflA2APF3 Tcp1-ps1-201ENSMUST00000120941 1466 ntBASIC4.31□□□□□ -1.72
CtcflA2APF3 Gm13100-201ENSMUST00000117157 1439 ntBASIC4.31□□□□□ -1.72
CtcflA2APF3 Vmn1r35-202ENSMUST00000227346 1854 ntBASIC4.31□□□□□ -1.72
CtcflA2APF3 Abca5-201ENSMUST00000043961 8231 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CtcflA2APF3 Gm5662-201ENSMUST00000101168 1840 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CtcflA2APF3 Gm24789-201ENSMUST00000104282 131 ntBASIC4.31□□□□□ -1.72
CtcflA2APF3 Gm15933-201ENSMUST00000117215 616 ntBASIC4.31□□□□□ -1.72
CtcflA2APF3 Gm14107-201ENSMUST00000117774 330 ntBASIC4.31□□□□□ -1.72
CtcflA2APF3 Olfr1171-ps1-201ENSMUST00000118079 837 ntBASIC4.31□□□□□ -1.72
CtcflA2APF3 Gm11550-201ENSMUST00000118210 699 ntBASIC4.31□□□□□ -1.72
CtcflA2APF3 Gm14875-201ENSMUST00000120881 319 ntBASIC4.31□□□□□ -1.72
CtcflA2APF3 Gm12222-201ENSMUST00000121368 260 ntBASIC4.31□□□□□ -1.72
CtcflA2APF3 Gm12041-201ENSMUST00000121606 602 ntBASIC4.31□□□□□ -1.72
CtcflA2APF3 Gm14695-201ENSMUST00000121721 282 ntBASIC4.31□□□□□ -1.72
CtcflA2APF3 Gm23585-201ENSMUST00000157656 102 ntBASIC4.31□□□□□ -1.72
CtcflA2APF3 Gm26373-201ENSMUST00000157833 103 ntBASIC4.31□□□□□ -1.72
CtcflA2APF3 Mir1963-201ENSMUST00000158594 59 ntBASIC4.31□□□□□ -1.72
CtcflA2APF3 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms