Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Trim3Q9R1R2 4930445B16Rik-201ENSMUST00000170085 1123 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Trim3Q9R1R2 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
Trim3Q9R1R2 Gm17086-201ENSMUST00000171346 484 ntBASIC4.57□□□□□ -1.68
Trim3Q9R1R2 4933433F19Rik-201ENSMUST00000180571 1088 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Trim3Q9R1R2 Gm8604-201ENSMUST00000183150 965 ntBASIC4.57□□□□□ -1.68
Trim3Q9R1R2 Mir6416-201ENSMUST00000183664 117 ntBASIC4.57□□□□□ -1.68
Trim3Q9R1R2 1700121L03Rik-201ENSMUST00000187796 704 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Trim3Q9R1R2 Gm28976-201ENSMUST00000188070 144 ntBASIC4.57□□□□□ -1.68
Trim3Q9R1R2 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC4.57□□□□□ -1.68
Trim3Q9R1R2 Gm2497-201ENSMUST00000189539 601 ntBASIC4.57□□□□□ -1.68
Trim3Q9R1R2 Gm17775-201ENSMUST00000198542 258 ntBASIC4.57□□□□□ -1.68
Trim3Q9R1R2 Gm42948-201ENSMUST00000199085 578 ntTSL 5 BASIC4.57□□□□□ -1.68
Trim3Q9R1R2 4922502N22Rik-201ENSMUST00000204038 1149 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Trim3Q9R1R2 Gm8999-201ENSMUST00000204951 969 ntBASIC4.57□□□□□ -1.68
Trim3Q9R1R2 Gm44817-201ENSMUST00000205416 453 ntBASIC4.57□□□□□ -1.68
Trim3Q9R1R2 Gm33501-201ENSMUST00000209257 1193 ntTSL 5 BASIC4.57□□□□□ -1.68
Trim3Q9R1R2 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC4.57□□□□□ -1.68
Trim3Q9R1R2 AC162376.1-201ENSMUST00000220120 435 ntBASIC4.57□□□□□ -1.68
Trim3Q9R1R2 AC125484.1-201ENSMUST00000223218 234 ntBASIC4.57□□□□□ -1.68
Trim3Q9R1R2 AC154270.1-201ENSMUST00000227226 426 ntBASIC4.57□□□□□ -1.68
Trim3Q9R1R2 AC161269.1-201ENSMUST00000228426 318 ntBASIC4.57□□□□□ -1.68
Trim3Q9R1R2 AC138765.1-201ENSMUST00000228657 385 ntBASIC4.57□□□□□ -1.68
Trim3Q9R1R2 Olfr1537-201ENSMUST00000073248 945 ntAPPRIS P2 BASIC4.57□□□□□ -1.68
Trim3Q9R1R2 Mir30b-201ENSMUST00000083542 96 ntBASIC4.57□□□□□ -1.68
Trim3Q9R1R2 Gm23796-201ENSMUST00000084011 160 ntBASIC4.57□□□□□ -1.68
Trim3Q9R1R2 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Trim3Q9R1R2 Zfp873-201ENSMUST00000105313 1893 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Trim3Q9R1R2 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Trim3Q9R1R2 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
Trim3Q9R1R2 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
Trim3Q9R1R2 Fcrl5-203ENSMUST00000178261 1791 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
Trim3Q9R1R2 Fcrl5-201ENSMUST00000049926 1791 ntAPPRIS P4 TSL 5 BASIC4.57□□□□□ -1.68
Trim3Q9R1R2 Gm30302-202ENSMUST00000220773 3511 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Trim3Q9R1R2 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Trim3Q9R1R2 Gm45129-201ENSMUST00000208444 2224 ntBASIC4.57□□□□□ -1.68
Trim3Q9R1R2 Gm37393-201ENSMUST00000195118 3870 ntBASIC4.57□□□□□ -1.68
Trim3Q9R1R2 Agtr1b-202ENSMUST00000163776 1633 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Trim3Q9R1R2 Pramel5-201ENSMUST00000035757 2147 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Trim3Q9R1R2 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Trim3Q9R1R2 Dnah7c-204ENSMUST00000189749 12207 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Trim3Q9R1R2 4933403O08Rik-203ENSMUST00000164272 1517 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
Trim3Q9R1R2 Gm42910-201ENSMUST00000198917 2921 ntBASIC4.56□□□□□ -1.68
Trim3Q9R1R2 AC139218.1-201ENSMUST00000228215 4287 ntBASIC4.56□□□□□ -1.68
Trim3Q9R1R2 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Trim3Q9R1R2 Zfp874b-201ENSMUST00000019572 3744 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
Trim3Q9R1R2 Cbll1-205ENSMUST00000188326 1399 ntTSL 2 BASIC4.56□□□□□ -1.68
Trim3Q9R1R2 Gm43266-201ENSMUST00000201049 1771 ntBASIC4.56□□□□□ -1.68
Trim3Q9R1R2 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Trim3Q9R1R2 Prl2b1-202ENSMUST00000102954 870 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
Trim3Q9R1R2 n-R5s82-201ENSMUST00000104213 109 ntBASIC4.56□□□□□ -1.68
Trim3Q9R1R2 Gm25419-201ENSMUST00000104215 191 ntBASIC4.56□□□□□ -1.68
Trim3Q9R1R2 Pigp-201ENSMUST00000113905 758 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Trim3Q9R1R2 Cypt1-202ENSMUST00000115422 661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
Trim3Q9R1R2 Gm8202-201ENSMUST00000117682 310 ntBASIC4.56□□□□□ -1.68
Trim3Q9R1R2 Gm15766-201ENSMUST00000118025 813 ntBASIC4.56□□□□□ -1.68
Trim3Q9R1R2 Gm11346-201ENSMUST00000118346 704 ntBASIC4.56□□□□□ -1.68
Trim3Q9R1R2 Gm11759-201ENSMUST00000121742 464 ntBASIC4.56□□□□□ -1.68
Trim3Q9R1R2 Gm15171-201ENSMUST00000122191 334 ntBASIC4.56□□□□□ -1.68
Trim3Q9R1R2 Gm25179-201ENSMUST00000122632 128 ntBASIC4.56□□□□□ -1.68
Trim3Q9R1R2 Gm11381-201ENSMUST00000138574 420 ntTSL 5 BASIC4.56□□□□□ -1.68
Trim3Q9R1R2 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC4.56□□□□□ -1.68
Trim3Q9R1R2 Obox4-ps9-201ENSMUST00000176927 1136 ntBASIC4.56□□□□□ -1.68
Trim3Q9R1R2 Gm18828-202ENSMUST00000181035 310 ntBASIC4.56□□□□□ -1.68
Trim3Q9R1R2 Prl8a6-201ENSMUST00000018392 900 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
Trim3Q9R1R2 Mir6418-201ENSMUST00000185075 115 ntBASIC4.56□□□□□ -1.68
Trim3Q9R1R2 Gm27492-201ENSMUST00000185194 187 ntBASIC4.56□□□□□ -1.68
Trim3Q9R1R2 Gm9569-201ENSMUST00000187492 787 ntBASIC4.56□□□□□ -1.68
Trim3Q9R1R2 Gm37837-201ENSMUST00000191743 604 ntBASIC4.56□□□□□ -1.68
Trim3Q9R1R2 Gm17953-201ENSMUST00000192061 667 ntBASIC4.56□□□□□ -1.68
Trim3Q9R1R2 Gm5842-201ENSMUST00000195073 622 ntBASIC4.56□□□□□ -1.68
Trim3Q9R1R2 Gm18445-201ENSMUST00000195502 774 ntBASIC4.56□□□□□ -1.68
Trim3Q9R1R2 AL645522.1-201ENSMUST00000197692 104 ntBASIC4.56□□□□□ -1.68
Trim3Q9R1R2 Gm44485-201ENSMUST00000199569 137 ntBASIC4.56□□□□□ -1.68
Trim3Q9R1R2 Gm43825-201ENSMUST00000199650 734 ntBASIC4.56□□□□□ -1.68
Trim3Q9R1R2 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC4.56□□□□□ -1.68
Trim3Q9R1R2 Gm44038-201ENSMUST00000203952 889 ntBASIC4.56□□□□□ -1.68
Trim3Q9R1R2 Gm31897-201ENSMUST00000205924 340 ntTSL 5 BASIC4.56□□□□□ -1.68
Trim3Q9R1R2 Gm44845-201ENSMUST00000208773 335 ntBASIC4.56□□□□□ -1.68
Trim3Q9R1R2 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Trim3Q9R1R2 Olfr494-201ENSMUST00000209743 1002 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
Trim3Q9R1R2 Olfr494-202ENSMUST00000210291 947 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Trim3Q9R1R2 Gm45269-201ENSMUST00000210359 282 ntBASIC4.56□□□□□ -1.68
Trim3Q9R1R2 Olfr858-ps1-201ENSMUST00000212591 930 ntBASIC4.56□□□□□ -1.68
Trim3Q9R1R2 Rpl29-ps2-202ENSMUST00000220540 1165 ntTSL 5 BASIC4.56□□□□□ -1.68
Trim3Q9R1R2 Rpl29-ps2-203ENSMUST00000222043 1036 ntTSL 5 BASIC4.56□□□□□ -1.68
Trim3Q9R1R2 Gm7040-201ENSMUST00000223271 443 ntBASIC4.56□□□□□ -1.68
Trim3Q9R1R2 CT009600.2-201ENSMUST00000226638 481 ntBASIC4.56□□□□□ -1.68
Trim3Q9R1R2 Apcs-201ENSMUST00000027824 971 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Trim3Q9R1R2 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Trim3Q9R1R2 Gm14393-201ENSMUST00000072895 625 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
Trim3Q9R1R2 Mir134-201ENSMUST00000083492 71 ntBASIC4.56□□□□□ -1.68
Trim3Q9R1R2 Mir504-201ENSMUST00000093602 79 ntBASIC4.56□□□□□ -1.68
Trim3Q9R1R2 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC4.56□□□□□ -1.68
Trim3Q9R1R2 Zfp759-201ENSMUST00000052716 3482 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Trim3Q9R1R2 Gm10997-201ENSMUST00000210294 1500 ntBASIC4.56□□□□□ -1.68
Trim3Q9R1R2 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC4.55□□□□□ -1.68
Trim3Q9R1R2 Olfr884-202ENSMUST00000181088 3185 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
Trim3Q9R1R2 Gm36298-201ENSMUST00000223394 1732 ntBASIC4.55□□□□□ -1.68
Trim3Q9R1R2 Cyp4a31-201ENSMUST00000030480 2396 ntTSL 2 BASIC4.55□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms