Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
Cdc40Q9DC48 Vmn1r5-202ENSMUST00000226130 3393 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Cdc40Q9DC48 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Cdc40Q9DC48 Olfr410-203ENSMUST00000214490 5075 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Cdc40Q9DC48 Gm26743-201ENSMUST00000180913 1726 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Cdc40Q9DC48 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC4.47□□□□□ -1.69
Cdc40Q9DC48 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC4.47□□□□□ -1.69
Cdc40Q9DC48 Mir879-201ENSMUST00000104703 76 ntBASIC4.47□□□□□ -1.69
Cdc40Q9DC48 Mup6-201ENSMUST00000107517 926 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Cdc40Q9DC48 Gm14575-201ENSMUST00000117210 560 ntBASIC4.47□□□□□ -1.69
Cdc40Q9DC48 Gm13195-201ENSMUST00000117229 261 ntBASIC4.47□□□□□ -1.69
Cdc40Q9DC48 Gm15534-201ENSMUST00000137642 562 ntBASIC4.47□□□□□ -1.69
Cdc40Q9DC48 Gm25669-201ENSMUST00000157699 112 ntBASIC4.47□□□□□ -1.69
Cdc40Q9DC48 Gm24188-201ENSMUST00000157980 108 ntBASIC4.47□□□□□ -1.69
Cdc40Q9DC48 Esp1-201ENSMUST00000161110 1049 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Cdc40Q9DC48 Gm17043-201ENSMUST00000164621 1283 ntBASIC4.47□□□□□ -1.69
Cdc40Q9DC48 Vmn1r170-201ENSMUST00000170166 915 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Cdc40Q9DC48 Gm33206-201ENSMUST00000193544 454 ntTSL 2 BASIC4.47□□□□□ -1.69
Cdc40Q9DC48 Gm45610-201ENSMUST00000209227 784 ntBASIC4.47□□□□□ -1.69
Cdc40Q9DC48 Gm3816-201ENSMUST00000209803 433 ntBASIC4.47□□□□□ -1.69
Cdc40Q9DC48 Gm5373-201ENSMUST00000212113 1050 ntBASIC4.47□□□□□ -1.69
Cdc40Q9DC48 Gm32171-201ENSMUST00000217419 1043 ntTSL 5 BASIC4.47□□□□□ -1.69
Cdc40Q9DC48 Gm272-201ENSMUST00000222073 919 ntBASIC4.47□□□□□ -1.69
Cdc40Q9DC48 Gm7040-201ENSMUST00000223271 443 ntBASIC4.47□□□□□ -1.69
Cdc40Q9DC48 AC125399.1-201ENSMUST00000224236 595 ntBASIC4.47□□□□□ -1.69
Cdc40Q9DC48 AC113031.3-201ENSMUST00000226552 190 ntBASIC4.47□□□□□ -1.69
Cdc40Q9DC48 Vmn1r215-201ENSMUST00000072972 1048 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Cdc40Q9DC48 Vmn1r33-201ENSMUST00000079678 1036 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Cdc40Q9DC48 Gm25147-201ENSMUST00000083030 105 ntBASIC4.47□□□□□ -1.69
Cdc40Q9DC48 Mir27a-201ENSMUST00000083510 87 ntBASIC4.47□□□□□ -1.69
Cdc40Q9DC48 Gm22826-201ENSMUST00000083774 165 ntBASIC4.47□□□□□ -1.69
Cdc40Q9DC48 Glyat-202ENSMUST00000119960 3296 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Cdc40Q9DC48 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Cdc40Q9DC48 Gm43826-201ENSMUST00000199604 2612 ntBASIC4.47□□□□□ -1.69
Cdc40Q9DC48 Sult1c1-201ENSMUST00000024738 1556 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Cdc40Q9DC48 Platr21-201ENSMUST00000126339 3511 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Cdc40Q9DC48 Olfr495-202ENSMUST00000215215 2460 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Cdc40Q9DC48 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Cdc40Q9DC48 AC124556.1-201ENSMUST00000218256 1319 ntBASIC4.46□□□□□ -1.69
Cdc40Q9DC48 Gm42616-201ENSMUST00000198989 4184 ntBASIC4.46□□□□□ -1.69
Cdc40Q9DC48 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
Cdc40Q9DC48 Gm37899-201ENSMUST00000193116 8717 ntBASIC4.46□□□□□ -1.69
Cdc40Q9DC48 P2ry12-202ENSMUST00000170388 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
Cdc40Q9DC48 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Cdc40Q9DC48 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Cdc40Q9DC48 Gm24469-201ENSMUST00000104487 131 ntBASIC4.46□□□□□ -1.7
Cdc40Q9DC48 Scgb2b3-201ENSMUST00000108090 339 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Cdc40Q9DC48 Scimp-202ENSMUST00000108534 1080 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Cdc40Q9DC48 Nr3c2-202ENSMUST00000109911 3804 ntTSL 5 BASIC4.46□□□□□ -1.7
Cdc40Q9DC48 Macrod2-203ENSMUST00000110061 887 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Cdc40Q9DC48 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC4.46□□□□□ -1.7
Cdc40Q9DC48 Gm12520-201ENSMUST00000117493 316 ntBASIC4.46□□□□□ -1.7
Cdc40Q9DC48 Gm8129-201ENSMUST00000118230 213 ntBASIC4.46□□□□□ -1.7
Cdc40Q9DC48 Gm12423-201ENSMUST00000118334 135 ntBASIC4.46□□□□□ -1.7
Cdc40Q9DC48 Gm12988-201ENSMUST00000119054 478 ntBASIC4.46□□□□□ -1.7
Cdc40Q9DC48 Gm12466-201ENSMUST00000121199 620 ntBASIC4.46□□□□□ -1.7
Cdc40Q9DC48 Gm12752-201ENSMUST00000121657 811 ntBASIC4.46□□□□□ -1.7
Cdc40Q9DC48 Gm24382-201ENSMUST00000122698 107 ntBASIC4.46□□□□□ -1.7
Cdc40Q9DC48 A230083N12Rik-201ENSMUST00000126646 572 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Cdc40Q9DC48 1700061F12Rik-201ENSMUST00000132414 876 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Cdc40Q9DC48 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC4.46□□□□□ -1.7
Cdc40Q9DC48 Gm5558-201ENSMUST00000178933 495 ntBASIC4.46□□□□□ -1.7
Cdc40Q9DC48 Il6st-204ENSMUST00000183829 612 ntTSL 5 BASIC4.46□□□□□ -1.7
Cdc40Q9DC48 Gm28503-201ENSMUST00000185966 147 ntBASIC4.46□□□□□ -1.7
Cdc40Q9DC48 Gm10292-202ENSMUST00000193165 585 ntBASIC4.46□□□□□ -1.7
Cdc40Q9DC48 Gm20056-201ENSMUST00000194813 519 ntBASIC4.46□□□□□ -1.7
Cdc40Q9DC48 Gm42720-201ENSMUST00000196813 300 ntBASIC4.46□□□□□ -1.7
Cdc40Q9DC48 Gm19596-201ENSMUST00000203685 739 ntBASIC4.46□□□□□ -1.7
Cdc40Q9DC48 Gm5581-202ENSMUST00000204992 714 ntTSL 3 BASIC4.46□□□□□ -1.7
Cdc40Q9DC48 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC4.46□□□□□ -1.7
Cdc40Q9DC48 AC155236.1-201ENSMUST00000220591 923 ntTSL 5 BASIC4.46□□□□□ -1.7
Cdc40Q9DC48 AC131178.1-201ENSMUST00000228649 492 ntBASIC4.46□□□□□ -1.7
Cdc40Q9DC48 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Cdc40Q9DC48 Pbsn-201ENSMUST00000000003 902 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Cdc40Q9DC48 Olfr18-201ENSMUST00000086473 1156 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
Cdc40Q9DC48 Gm12888-201ENSMUST00000097905 1181 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Cdc40Q9DC48 Med14-203ENSMUST00000115481 3729 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Cdc40Q9DC48 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC4.46□□□□□ -1.7
Cdc40Q9DC48 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
Cdc40Q9DC48 Olfr639-202ENSMUST00000215653 6570 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Cdc40Q9DC48 Arrdc3-205ENSMUST00000161441 1908 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Cdc40Q9DC48 Olfr620-201ENSMUST00000052152 3157 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Cdc40Q9DC48 Gm43781-201ENSMUST00000197634 2681 ntBASIC4.46□□□□□ -1.7
Cdc40Q9DC48 Zfp874b-201ENSMUST00000019572 3744 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
Cdc40Q9DC48 Gm42552-201ENSMUST00000196754 4497 ntBASIC4.46□□□□□ -1.7
Cdc40Q9DC48 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Cdc40Q9DC48 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Cdc40Q9DC48 Klhl15-204ENSMUST00000113915 6241 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Cdc40Q9DC48 Fzd3-202ENSMUST00000131309 12734 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Cdc40Q9DC48 Glmn-203ENSMUST00000100949 1759 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Cdc40Q9DC48 Naa16-201ENSMUST00000022597 13223 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Cdc40Q9DC48 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Cdc40Q9DC48 Jchain-201ENSMUST00000087033 1393 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Cdc40Q9DC48 Gm20631-201ENSMUST00000177239 5697 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Cdc40Q9DC48 Olfr328-202ENSMUST00000108824 1199 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
Cdc40Q9DC48 Gm9427-201ENSMUST00000116187 651 ntBASIC4.45□□□□□ -1.7
Cdc40Q9DC48 Spin2-ps1-201ENSMUST00000116643 875 ntBASIC4.45□□□□□ -1.7
Cdc40Q9DC48 Gm14725-201ENSMUST00000120324 828 ntBASIC4.45□□□□□ -1.7
Cdc40Q9DC48 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Cdc40Q9DC48 Gm15057-201ENSMUST00000121516 534 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 90.2 ms