Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
Cchcr1Q8K2I2 4930509E16Rik-201ENSMUST00000181405 1191 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Cchcr1Q8K2I2 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Cchcr1Q8K2I2 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Cchcr1Q8K2I2 Gm28830-201ENSMUST00000188192 213 ntBASIC5.44□□□□□ -1.54
Cchcr1Q8K2I2 Gm37631-201ENSMUST00000192275 364 ntBASIC5.44□□□□□ -1.54
Cchcr1Q8K2I2 Gm43648-201ENSMUST00000197775 2485 ntBASIC5.44□□□□□ -1.54
Cchcr1Q8K2I2 Gm43342-201ENSMUST00000201027 924 ntTSL 3 BASIC5.44□□□□□ -1.54
Cchcr1Q8K2I2 Gm32308-201ENSMUST00000203053 280 ntBASIC5.44□□□□□ -1.54
Cchcr1Q8K2I2 Klrb1b-204ENSMUST00000205130 917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Cchcr1Q8K2I2 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Cchcr1Q8K2I2 AC124356.2-201ENSMUST00000221874 336 ntBASIC5.44□□□□□ -1.54
Cchcr1Q8K2I2 CT954323.2-201ENSMUST00000222056 213 ntBASIC5.44□□□□□ -1.54
Cchcr1Q8K2I2 AC098742.1-201ENSMUST00000227945 373 ntBASIC5.44□□□□□ -1.54
Cchcr1Q8K2I2 Vmn1r214-201ENSMUST00000074252 1227 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Cchcr1Q8K2I2 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Cchcr1Q8K2I2 n-R5s168-201ENSMUST00000083948 104 ntBASIC5.44□□□□□ -1.54
Cchcr1Q8K2I2 Spp1-202ENSMUST00000086833 1411 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
Cchcr1Q8K2I2 Glcci1-206ENSMUST00000162567 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Cchcr1Q8K2I2 Neat1-201ENSMUST00000173672 20771 ntBASIC5.44□□□□□ -1.54
Cchcr1Q8K2I2 AC126439.1-201ENSMUST00000226772 2104 ntBASIC5.44□□□□□ -1.54
Cchcr1Q8K2I2 Klhl15-204ENSMUST00000113915 6241 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Cchcr1Q8K2I2 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Cchcr1Q8K2I2 4921515E04Rik-202ENSMUST00000226383 1738 ntBASIC5.43□□□□□ -1.54
Cchcr1Q8K2I2 Gm43329-201ENSMUST00000200120 3232 ntBASIC5.43□□□□□ -1.54
Cchcr1Q8K2I2 Tnfrsf26-202ENSMUST00000208124 3062 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Cchcr1Q8K2I2 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
Cchcr1Q8K2I2 4930503E14Rik-201ENSMUST00000100688 1287 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Cchcr1Q8K2I2 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Cchcr1Q8K2I2 Fpr2-202ENSMUST00000149944 883 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Cchcr1Q8K2I2 Gm24751-201ENSMUST00000157844 102 ntBASIC5.43□□□□□ -1.54
Cchcr1Q8K2I2 Gm22529-201ENSMUST00000158817 123 ntBASIC5.43□□□□□ -1.54
Cchcr1Q8K2I2 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Cchcr1Q8K2I2 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Cchcr1Q8K2I2 Gm16545-201ENSMUST00000161968 463 ntBASIC5.43□□□□□ -1.54
Cchcr1Q8K2I2 Gm5258-201ENSMUST00000165437 327 ntBASIC5.43□□□□□ -1.54
Cchcr1Q8K2I2 Gm7876-201ENSMUST00000169465 984 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
Cchcr1Q8K2I2 Gm6337-202ENSMUST00000170613 997 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
Cchcr1Q8K2I2 Vmn2r-ps72-201ENSMUST00000172586 907 ntBASIC5.43□□□□□ -1.54
Cchcr1Q8K2I2 C130060C02Rik-201ENSMUST00000181731 1142 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Cchcr1Q8K2I2 Gm26993-201ENSMUST00000182766 789 ntBASIC5.43□□□□□ -1.54
Cchcr1Q8K2I2 Gm28703-201ENSMUST00000185312 1159 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Cchcr1Q8K2I2 Gm43304-201ENSMUST00000196803 326 ntBASIC5.43□□□□□ -1.54
Cchcr1Q8K2I2 Gm43724-201ENSMUST00000197516 226 ntBASIC5.43□□□□□ -1.54
Cchcr1Q8K2I2 Gm8069-201ENSMUST00000197887 154 ntBASIC5.43□□□□□ -1.54
Cchcr1Q8K2I2 Olfr556-202ENSMUST00000213485 3825 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Cchcr1Q8K2I2 Olfr931-ps1-201ENSMUST00000214941 549 ntBASIC5.43□□□□□ -1.54
Cchcr1Q8K2I2 Gm6049-201ENSMUST00000222369 458 ntBASIC5.43□□□□□ -1.54
Cchcr1Q8K2I2 AC127371.1-201ENSMUST00000228516 312 ntBASIC5.43□□□□□ -1.54
Cchcr1Q8K2I2 n-R5s173-201ENSMUST00000082620 119 ntBASIC5.43□□□□□ -1.54
Cchcr1Q8K2I2 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC5.43□□□□□ -1.54
Cchcr1Q8K2I2 Ank2-208ENSMUST00000182078 14305 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
Cchcr1Q8K2I2 Gm45854-201ENSMUST00000211857 3488 ntBASIC5.43□□□□□ -1.54
Cchcr1Q8K2I2 Gm32444-201ENSMUST00000195147 3511 ntBASIC5.43□□□□□ -1.54
Cchcr1Q8K2I2 Gm45853-201ENSMUST00000212310 3171 ntBASIC5.43□□□□□ -1.54
Cchcr1Q8K2I2 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Cchcr1Q8K2I2 Igsf10-202ENSMUST00000193455 8484 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Cchcr1Q8K2I2 Agbl1-201ENSMUST00000026854 3452 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
Cchcr1Q8K2I2 Casp4-201ENSMUST00000027012 1435 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Cchcr1Q8K2I2 Fpgt-201ENSMUST00000066568 3518 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Cchcr1Q8K2I2 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Cchcr1Q8K2I2 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Cchcr1Q8K2I2 Olfr655-203ENSMUST00000215538 2012 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Cchcr1Q8K2I2 Olfr655-204ENSMUST00000216750 2010 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Cchcr1Q8K2I2 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Cchcr1Q8K2I2 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC5.42□□□□□ -1.54
Cchcr1Q8K2I2 Gp6-201ENSMUST00000108590 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Cchcr1Q8K2I2 Gm22194-201ENSMUST00000116869 95 ntBASIC5.42□□□□□ -1.54
Cchcr1Q8K2I2 Gm12285-201ENSMUST00000117347 233 ntBASIC5.42□□□□□ -1.54
Cchcr1Q8K2I2 Gm15297-201ENSMUST00000117795 290 ntBASIC5.42□□□□□ -1.54
Cchcr1Q8K2I2 Gm12231-201ENSMUST00000119447 695 ntBASIC5.42□□□□□ -1.54
Cchcr1Q8K2I2 4933416E14Rik-201ENSMUST00000130841 491 ntBASIC5.42□□□□□ -1.54
Cchcr1Q8K2I2 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC5.42□□□□□ -1.54
Cchcr1Q8K2I2 Gm25923-201ENSMUST00000158312 138 ntBASIC5.42□□□□□ -1.54
Cchcr1Q8K2I2 Gm16114-201ENSMUST00000161930 300 ntBASIC5.42□□□□□ -1.54
Cchcr1Q8K2I2 Gm8214-201ENSMUST00000172123 351 ntBASIC5.42□□□□□ -1.54
Cchcr1Q8K2I2 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC5.42□□□□□ -1.54
Cchcr1Q8K2I2 Gm27039-201ENSMUST00000182438 962 ntBASIC5.42□□□□□ -1.54
Cchcr1Q8K2I2 Gm27457-201ENSMUST00000184771 156 ntBASIC5.42□□□□□ -1.54
Cchcr1Q8K2I2 Gm27355-201ENSMUST00000185045 128 ntBASIC5.42□□□□□ -1.54
Cchcr1Q8K2I2 Gm21139-201ENSMUST00000186594 877 ntBASIC5.42□□□□□ -1.54
Cchcr1Q8K2I2 Il3-201ENSMUST00000019058 629 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Cchcr1Q8K2I2 Gm36971-201ENSMUST00000195244 378 ntTSL 5 BASIC5.42□□□□□ -1.54
Cchcr1Q8K2I2 Igkv2-107-201ENSMUST00000196000 313 ntBASIC5.42□□□□□ -1.54
Cchcr1Q8K2I2 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC5.42□□□□□ -1.54
Cchcr1Q8K2I2 Gm44237-201ENSMUST00000205183 936 ntBASIC5.42□□□□□ -1.54
Cchcr1Q8K2I2 Gm44733-201ENSMUST00000208067 543 ntTSL 3 BASIC5.42□□□□□ -1.54
Cchcr1Q8K2I2 Olfr663-201ENSMUST00000209914 959 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Cchcr1Q8K2I2 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC5.42□□□□□ -1.54
Cchcr1Q8K2I2 4930558N11Rik-203ENSMUST00000211456 1180 ntTSL 5 BASIC5.42□□□□□ -1.54
Cchcr1Q8K2I2 4930503L19Rik-202ENSMUST00000211817 913 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Cchcr1Q8K2I2 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC5.42□□□□□ -1.54
Cchcr1Q8K2I2 Gm40658-202ENSMUST00000221900 701 ntTSL 5 BASIC5.42□□□□□ -1.54
Cchcr1Q8K2I2 AC154335.2-201ENSMUST00000225916 638 ntBASIC5.42□□□□□ -1.54
Cchcr1Q8K2I2 Defa34-201ENSMUST00000075268 375 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
Cchcr1Q8K2I2 Gm24031-201ENSMUST00000083930 131 ntBASIC5.42□□□□□ -1.54
Cchcr1Q8K2I2 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Cchcr1Q8K2I2 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC5.42□□□□□ -1.54
Cchcr1Q8K2I2 Gm5615-201ENSMUST00000098900 2348 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Cchcr1Q8K2I2 Gm17791-201ENSMUST00000185660 1501 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms