Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gm16254-201ENSMUST00000131528 730 ntBASIC4.73□□□□□ -1.65
Ccdc28aQ8CEI3 Gm12735-201ENSMUST00000146218 651 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Ccdc28aQ8CEI3 Gm25923-201ENSMUST00000158312 138 ntBASIC4.73□□□□□ -1.65
Ccdc28aQ8CEI3 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC4.73□□□□□ -1.65
Ccdc28aQ8CEI3 Gm7266-201ENSMUST00000187999 405 ntBASIC4.73□□□□□ -1.65
Ccdc28aQ8CEI3 Gm5511-201ENSMUST00000189380 802 ntBASIC4.73□□□□□ -1.65
Ccdc28aQ8CEI3 Gm32391-201ENSMUST00000191839 540 ntTSL 2 BASIC4.73□□□□□ -1.65
Ccdc28aQ8CEI3 Gm43586-201ENSMUST00000195948 310 ntBASIC4.73□□□□□ -1.65
Ccdc28aQ8CEI3 Gm43144-201ENSMUST00000198256 485 ntBASIC4.73□□□□□ -1.65
Ccdc28aQ8CEI3 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Ccdc28aQ8CEI3 Gm44543-201ENSMUST00000209136 396 ntBASIC4.73□□□□□ -1.65
Ccdc28aQ8CEI3 AC098742.1-201ENSMUST00000227945 373 ntBASIC4.73□□□□□ -1.65
Ccdc28aQ8CEI3 Olfr364-ps1-201ENSMUST00000104995 1766 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Ccdc28aQ8CEI3 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC4.73□□□□□ -1.65
Ccdc28aQ8CEI3 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Ccdc28aQ8CEI3 Gm45137-201ENSMUST00000208652 4415 ntBASIC4.73□□□□□ -1.65
Ccdc28aQ8CEI3 Vmn1r66-201ENSMUST00000060374 1524 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Ccdc28aQ8CEI3 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Ccdc28aQ8CEI3 1700017N19Rik-204ENSMUST00000188736 1709 ntTSL 5 BASIC4.72□□□□□ -1.65
Ccdc28aQ8CEI3 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Ccdc28aQ8CEI3 C2cd6-201ENSMUST00000097080 2131 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
Ccdc28aQ8CEI3 Gm38106-201ENSMUST00000194107 2534 ntBASIC4.72□□□□□ -1.65
Ccdc28aQ8CEI3 Gm42680-201ENSMUST00000196238 2500 ntBASIC4.72□□□□□ -1.65
Ccdc28aQ8CEI3 Gm42876-201ENSMUST00000196989 3215 ntBASIC4.72□□□□□ -1.65
Ccdc28aQ8CEI3 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Ccdc28aQ8CEI3 H2al1n-201ENSMUST00000105137 514 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Ccdc28aQ8CEI3 Gm14304-201ENSMUST00000117272 446 ntBASIC4.72□□□□□ -1.65
Ccdc28aQ8CEI3 Gm15212-201ENSMUST00000122403 466 ntBASIC4.72□□□□□ -1.65
Ccdc28aQ8CEI3 Gm10059-201ENSMUST00000131139 171 ntBASIC4.72□□□□□ -1.65
Ccdc28aQ8CEI3 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC4.72□□□□□ -1.65
Ccdc28aQ8CEI3 Gm13773-201ENSMUST00000156693 583 ntTSL 3 BASIC4.72□□□□□ -1.65
Ccdc28aQ8CEI3 Gm24689-201ENSMUST00000157760 104 ntBASIC4.72□□□□□ -1.65
Ccdc28aQ8CEI3 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC4.72□□□□□ -1.65
Ccdc28aQ8CEI3 Rab26os-201ENSMUST00000176215 477 ntBASIC4.72□□□□□ -1.65
Ccdc28aQ8CEI3 Gm4617-201ENSMUST00000178993 331 ntBASIC4.72□□□□□ -1.65
Ccdc28aQ8CEI3 Gm37815-201ENSMUST00000195665 411 ntTSL 5 BASIC4.72□□□□□ -1.65
Ccdc28aQ8CEI3 Gm43350-201ENSMUST00000196382 711 ntBASIC4.72□□□□□ -1.65
Ccdc28aQ8CEI3 Gm44474-201ENSMUST00000196525 127 ntBASIC4.72□□□□□ -1.65
Ccdc28aQ8CEI3 Fbxw23-201ENSMUST00000198015 425 ntTSL 2 BASIC4.72□□□□□ -1.65
Ccdc28aQ8CEI3 Gm42990-201ENSMUST00000199231 312 ntBASIC4.72□□□□□ -1.65
Ccdc28aQ8CEI3 Gm44431-201ENSMUST00000203500 413 ntBASIC4.72□□□□□ -1.65
Ccdc28aQ8CEI3 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC4.72□□□□□ -1.65
Ccdc28aQ8CEI3 Gm18442-201ENSMUST00000220925 639 ntBASIC4.72□□□□□ -1.65
Ccdc28aQ8CEI3 Gm36372-201ENSMUST00000221011 778 ntTSL 5 BASIC4.72□□□□□ -1.65
Ccdc28aQ8CEI3 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC4.72□□□□□ -1.65
Ccdc28aQ8CEI3 AC131745.1-201ENSMUST00000223660 330 ntBASIC4.72□□□□□ -1.65
Ccdc28aQ8CEI3 AC154657.1-201ENSMUST00000226394 775 ntBASIC4.72□□□□□ -1.65
Ccdc28aQ8CEI3 AC154239.2-201ENSMUST00000227859 233 ntBASIC4.72□□□□□ -1.65
Ccdc28aQ8CEI3 Olfr720-201ENSMUST00000035250 1023 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Ccdc28aQ8CEI3 Mir504-201ENSMUST00000093602 79 ntBASIC4.72□□□□□ -1.65
Ccdc28aQ8CEI3 Olfr547-201ENSMUST00000098229 936 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Ccdc28aQ8CEI3 Sptssb-201ENSMUST00000051239 1795 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Ccdc28aQ8CEI3 Kcnt2-203ENSMUST00000120796 3540 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Ccdc28aQ8CEI3 Olfr1471-205ENSMUST00000217482 1545 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Ccdc28aQ8CEI3 Gm9921-201ENSMUST00000173293 4399 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Ccdc28aQ8CEI3 Ano5-201ENSMUST00000043944 7785 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
Ccdc28aQ8CEI3 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.65
Ccdc28aQ8CEI3 Olfr205-202ENSMUST00000213910 1650 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Ccdc28aQ8CEI3 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Ccdc28aQ8CEI3 Hbb-bh2-201ENSMUST00000106866 558 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Ccdc28aQ8CEI3 Gm14806-201ENSMUST00000116606 2110 ntBASIC4.71□□□□□ -1.66
Ccdc28aQ8CEI3 Gm13440-201ENSMUST00000121665 496 ntBASIC4.71□□□□□ -1.66
Ccdc28aQ8CEI3 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC4.71□□□□□ -1.66
Ccdc28aQ8CEI3 Gm10269-201ENSMUST00000165229 372 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Ccdc28aQ8CEI3 Has2os-203ENSMUST00000165880 638 ntTSL 2 BASIC4.71□□□□□ -1.66
Ccdc28aQ8CEI3 Vmn1r-ps45-201ENSMUST00000174106 955 ntBASIC4.71□□□□□ -1.66
Ccdc28aQ8CEI3 Gm23450-201ENSMUST00000178285 91 ntBASIC4.71□□□□□ -1.66
Ccdc28aQ8CEI3 Gm20767-201ENSMUST00000179071 510 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Ccdc28aQ8CEI3 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC4.71□□□□□ -1.66
Ccdc28aQ8CEI3 4930509E16Rik-201ENSMUST00000181405 1191 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Ccdc28aQ8CEI3 4930519F16Rik-206ENSMUST00000183292 800 ntBASIC4.71□□□□□ -1.66
Ccdc28aQ8CEI3 Gm8669-201ENSMUST00000183839 945 ntBASIC4.71□□□□□ -1.66
Ccdc28aQ8CEI3 Gm27602-201ENSMUST00000183861 111 ntBASIC4.71□□□□□ -1.66
Ccdc28aQ8CEI3 Gm18728-201ENSMUST00000186155 753 ntBASIC4.71□□□□□ -1.66
Ccdc28aQ8CEI3 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC4.71□□□□□ -1.66
Ccdc28aQ8CEI3 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC4.71□□□□□ -1.66
Ccdc28aQ8CEI3 Rps26-ps1-202ENSMUST00000212102 351 ntBASIC4.71□□□□□ -1.66
Ccdc28aQ8CEI3 Olfr864-ps1-201ENSMUST00000212664 930 ntBASIC4.71□□□□□ -1.66
Ccdc28aQ8CEI3 AC156832.3-201ENSMUST00000215591 435 ntBASIC4.71□□□□□ -1.66
Ccdc28aQ8CEI3 AC106830.1-201ENSMUST00000228032 1003 ntBASIC4.71□□□□□ -1.66
Ccdc28aQ8CEI3 Capza3-201ENSMUST00000043797 1222 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Ccdc28aQ8CEI3 Olfr768-201ENSMUST00000063031 939 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Ccdc28aQ8CEI3 Olfr934-201ENSMUST00000074211 933 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Ccdc28aQ8CEI3 Gm24031-201ENSMUST00000083930 131 ntBASIC4.71□□□□□ -1.66
Ccdc28aQ8CEI3 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Ccdc28aQ8CEI3 Gm37195-201ENSMUST00000192006 3018 ntBASIC4.71□□□□□ -1.66
Ccdc28aQ8CEI3 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Ccdc28aQ8CEI3 Gm38259-201ENSMUST00000194602 3534 ntBASIC4.71□□□□□ -1.66
Ccdc28aQ8CEI3 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Ccdc28aQ8CEI3 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC4.71□□□□□ -1.66
Ccdc28aQ8CEI3 Olfr32-204ENSMUST00000215153 3117 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
Ccdc28aQ8CEI3 Gm42551-201ENSMUST00000197701 1573 ntBASIC4.7□□□□□ -1.66
Ccdc28aQ8CEI3 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Ccdc28aQ8CEI3 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Ccdc28aQ8CEI3 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Ccdc28aQ8CEI3 Gm45885-202ENSMUST00000211520 1383 ntBASIC4.7□□□□□ -1.66
Ccdc28aQ8CEI3 Gm20515-201ENSMUST00000174440 4824 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Ccdc28aQ8CEI3 Zscan4e-202ENSMUST00000210521 1745 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Ccdc28aQ8CEI3 Gm37329-201ENSMUST00000192973 2057 ntBASIC4.7□□□□□ -1.66
Ccdc28aQ8CEI3 Mir680-1-201ENSMUST00000102257 109 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms