Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm16094-201ENSMUST00000162784 427 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Nup88Q8CEC0 Vmn2r-ps10-201ENSMUST00000176836 898 ntBASIC5.66□□□□□ -1.5
Nup88Q8CEC0 Vmn2r-ps8-201ENSMUST00000177088 898 ntBASIC5.66□□□□□ -1.5
Nup88Q8CEC0 Esp38-201ENSMUST00000178880 243 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Nup88Q8CEC0 Gm18802-201ENSMUST00000186270 888 ntBASIC5.66□□□□□ -1.5
Nup88Q8CEC0 Ly6e-215ENSMUST00000191436 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Nup88Q8CEC0 Gm20056-201ENSMUST00000194813 519 ntBASIC5.66□□□□□ -1.5
Nup88Q8CEC0 Gm5842-201ENSMUST00000195073 622 ntBASIC5.66□□□□□ -1.5
Nup88Q8CEC0 AL645522.1-201ENSMUST00000197692 104 ntBASIC5.66□□□□□ -1.5
Nup88Q8CEC0 Gm19617-201ENSMUST00000202977 308 ntBASIC5.66□□□□□ -1.5
Nup88Q8CEC0 Klra14-ps-202ENSMUST00000203601 1104 ntTSL 5 BASIC5.66□□□□□ -1.5
Nup88Q8CEC0 4930480M12Rik-201ENSMUST00000221084 550 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Nup88Q8CEC0 Olfr1020-201ENSMUST00000055840 1079 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Nup88Q8CEC0 Olfr209-201ENSMUST00000055868 918 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Nup88Q8CEC0 Vmn1r226-201ENSMUST00000061756 897 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Nup88Q8CEC0 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
Nup88Q8CEC0 Vmn1r178-201ENSMUST00000078593 915 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Nup88Q8CEC0 Gm23623-201ENSMUST00000082461 107 ntBASIC5.66□□□□□ -1.5
Nup88Q8CEC0 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Nup88Q8CEC0 Gm45324-201ENSMUST00000211193 5638 ntBASIC5.66□□□□□ -1.5
Nup88Q8CEC0 Vmn2r102-201ENSMUST00000171741 2574 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Nup88Q8CEC0 Gm42955-201ENSMUST00000197355 3393 ntBASIC5.66□□□□□ -1.5
Nup88Q8CEC0 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Nup88Q8CEC0 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Nup88Q8CEC0 Olfr1283-202ENSMUST00000204064 1625 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Nup88Q8CEC0 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Nup88Q8CEC0 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Nup88Q8CEC0 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Nup88Q8CEC0 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Nup88Q8CEC0 Cbll1-205ENSMUST00000188326 1399 ntTSL 2 BASIC5.66□□□□□ -1.5
Nup88Q8CEC0 Mrc1-201ENSMUST00000028045 5374 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Nup88Q8CEC0 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Nup88Q8CEC0 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Nup88Q8CEC0 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Nup88Q8CEC0 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Nup88Q8CEC0 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Nup88Q8CEC0 Cxcl15-201ENSMUST00000031322 2127 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Nup88Q8CEC0 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Nup88Q8CEC0 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Nup88Q8CEC0 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC5.65□□□□□ -1.5
Nup88Q8CEC0 Gm12423-201ENSMUST00000118334 135 ntBASIC5.65□□□□□ -1.5
Nup88Q8CEC0 Gm12752-201ENSMUST00000121657 811 ntBASIC5.65□□□□□ -1.5
Nup88Q8CEC0 8030443G20Rik-201ENSMUST00000140919 903 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Nup88Q8CEC0 Rps11-ps1-201ENSMUST00000171632 475 ntBASIC5.65□□□□□ -1.5
Nup88Q8CEC0 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC5.65□□□□□ -1.5
Nup88Q8CEC0 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC5.65□□□□□ -1.5
Nup88Q8CEC0 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC5.65□□□□□ -1.5
Nup88Q8CEC0 D030025E07Rik-204ENSMUST00000198275 653 ntTSL 3 BASIC5.65□□□□□ -1.5
Nup88Q8CEC0 Gm5288-201ENSMUST00000198323 1119 ntBASIC5.65□□□□□ -1.5
Nup88Q8CEC0 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Nup88Q8CEC0 Gm17915-201ENSMUST00000222077 548 ntBASIC5.65□□□□□ -1.5
Nup88Q8CEC0 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Nup88Q8CEC0 AC138765.1-201ENSMUST00000228657 385 ntBASIC5.65□□□□□ -1.5
Nup88Q8CEC0 Gm5215-201ENSMUST00000054380 405 ntBASIC5.65□□□□□ -1.5
Nup88Q8CEC0 Tas2r102-201ENSMUST00000069268 1044 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Nup88Q8CEC0 Ear6-201ENSMUST00000074477 713 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Nup88Q8CEC0 Vmn1r52-201ENSMUST00000079832 930 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Nup88Q8CEC0 Olfr1321-201ENSMUST00000088876 1056 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Nup88Q8CEC0 BC003331-204ENSMUST00000097547 2851 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
Nup88Q8CEC0 Slc5a3-201ENSMUST00000113975 10913 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Nup88Q8CEC0 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Nup88Q8CEC0 AC152414.1-201ENSMUST00000218784 2287 ntTSL 5 BASIC5.65□□□□□ -1.51
Nup88Q8CEC0 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Nup88Q8CEC0 Cyp4a31-201ENSMUST00000030480 2396 ntTSL 2 BASIC5.65□□□□□ -1.51
Nup88Q8CEC0 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
Nup88Q8CEC0 Olfr1489-202ENSMUST00000217182 11140 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Nup88Q8CEC0 Gm37562-201ENSMUST00000194763 4328 ntBASIC5.65□□□□□ -1.51
Nup88Q8CEC0 Olfr410-203ENSMUST00000214490 5075 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Nup88Q8CEC0 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Nup88Q8CEC0 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Nup88Q8CEC0 Rgs17-202ENSMUST00000064225 8191 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Nup88Q8CEC0 BC051142-201ENSMUST00000078615 1899 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
Nup88Q8CEC0 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Nup88Q8CEC0 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Nup88Q8CEC0 AC153729.4-201ENSMUST00000217582 3826 ntBASIC5.64□□□□□ -1.51
Nup88Q8CEC0 Vmn1r213-202ENSMUST00000227573 3515 ntAPPRIS ALT2 BASIC5.64□□□□□ -1.51
Nup88Q8CEC0 Olfr1341-202ENSMUST00000214131 4300 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Nup88Q8CEC0 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Nup88Q8CEC0 Gm13321-201ENSMUST00000117101 400 ntBASIC5.64□□□□□ -1.51
Nup88Q8CEC0 Gm12328-201ENSMUST00000118611 197 ntBASIC5.64□□□□□ -1.51
Nup88Q8CEC0 Gm12988-201ENSMUST00000119054 478 ntBASIC5.64□□□□□ -1.51
Nup88Q8CEC0 Gm11790-201ENSMUST00000119569 455 ntBASIC5.64□□□□□ -1.51
Nup88Q8CEC0 Mup-ps18-201ENSMUST00000120145 531 ntBASIC5.64□□□□□ -1.51
Nup88Q8CEC0 Gm15390-201ENSMUST00000120323 738 ntBASIC5.64□□□□□ -1.51
Nup88Q8CEC0 Gm13118-201ENSMUST00000120402 549 ntBASIC5.64□□□□□ -1.51
Nup88Q8CEC0 Gm14840-201ENSMUST00000122135 594 ntBASIC5.64□□□□□ -1.51
Nup88Q8CEC0 Ccdc34os-201ENSMUST00000123633 979 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Nup88Q8CEC0 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Nup88Q8CEC0 Rpl39-ps-201ENSMUST00000142604 355 ntBASIC5.64□□□□□ -1.51
Nup88Q8CEC0 Gm6619-201ENSMUST00000159229 608 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Nup88Q8CEC0 Gm21999-201ENSMUST00000165985 387 ntBASIC5.64□□□□□ -1.51
Nup88Q8CEC0 Gm5777-201ENSMUST00000177265 448 ntBASIC5.64□□□□□ -1.51
Nup88Q8CEC0 4930509E16Rik-201ENSMUST00000181405 1191 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Nup88Q8CEC0 Gm28763-201ENSMUST00000188870 166 ntTSL 5 BASIC5.64□□□□□ -1.51
Nup88Q8CEC0 Gm29579-201ENSMUST00000190820 166 ntTSL 5 BASIC5.64□□□□□ -1.51
Nup88Q8CEC0 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC5.64□□□□□ -1.51
Nup88Q8CEC0 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC5.64□□□□□ -1.51
Nup88Q8CEC0 Rps26-ps1-202ENSMUST00000212102 351 ntBASIC5.64□□□□□ -1.51
Nup88Q8CEC0 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Nup88Q8CEC0 Tmem209-211ENSMUST00000222934 1212 ntTSL 5 BASIC5.64□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 106.8 ms