Protein–RNA interactions for Protein: Q8CCH2

Nhlrc3, NHL repeat-containing protein 3, mousemouse

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc3Q8CCH2 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
Nhlrc3Q8CCH2 Gm30292-201ENSMUST00000194198 3000 ntTSL 3 BASIC4.15□□□□□ -1.75
Nhlrc3Q8CCH2 Slc15a2-201ENSMUST00000023616 3993 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
Nhlrc3Q8CCH2 1700017N19Rik-203ENSMUST00000187119 1524 ntTSL 5 BASIC4.15□□□□□ -1.75
Nhlrc3Q8CCH2 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Nhlrc3Q8CCH2 Olfr826-202ENSMUST00000203720 1535 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Nhlrc3Q8CCH2 Gm13961-201ENSMUST00000119282 4772 ntBASIC4.15□□□□□ -1.75
Nhlrc3Q8CCH2 Dync2h1-201ENSMUST00000048417 13972 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
Nhlrc3Q8CCH2 Sdr16c6-202ENSMUST00000108383 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Nhlrc3Q8CCH2 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
Nhlrc3Q8CCH2 Gm2099-202ENSMUST00000223310 3341 ntBASIC4.15□□□□□ -1.75
Nhlrc3Q8CCH2 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Nhlrc3Q8CCH2 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Nhlrc3Q8CCH2 Olfr821-202ENSMUST00000205181 1993 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
Nhlrc3Q8CCH2 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
Nhlrc3Q8CCH2 Olfr1176-202ENSMUST00000213778 2823 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Nhlrc3Q8CCH2 Gm26717-201ENSMUST00000181713 1418 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Nhlrc3Q8CCH2 Serpini1-201ENSMUST00000029423 4091 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Nhlrc3Q8CCH2 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Nhlrc3Q8CCH2 BC003331-204ENSMUST00000097547 2851 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
Nhlrc3Q8CCH2 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
Nhlrc3Q8CCH2 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Nhlrc3Q8CCH2 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Nhlrc3Q8CCH2 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
Nhlrc3Q8CCH2 Ighv1-39-201ENSMUST00000103515 351 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Nhlrc3Q8CCH2 Gm11965-201ENSMUST00000122017 277 ntBASIC4.14□□□□□ -1.75
Nhlrc3Q8CCH2 Gm15584-201ENSMUST00000123231 759 ntTSL 2 BASIC4.14□□□□□ -1.75
Nhlrc3Q8CCH2 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC4.14□□□□□ -1.75
Nhlrc3Q8CCH2 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Nhlrc3Q8CCH2 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC4.14□□□□□ -1.75
Nhlrc3Q8CCH2 Gm23587-201ENSMUST00000157658 84 ntBASIC4.14□□□□□ -1.75
Nhlrc3Q8CCH2 Gm23030-201ENSMUST00000158004 273 ntBASIC4.14□□□□□ -1.75
Nhlrc3Q8CCH2 Gm3091-201ENSMUST00000163408 484 ntBASIC4.14□□□□□ -1.75
Nhlrc3Q8CCH2 Gm22859-201ENSMUST00000174978 122 ntBASIC4.14□□□□□ -1.75
Nhlrc3Q8CCH2 Vmn1r-ps22-201ENSMUST00000176017 900 ntBASIC4.14□□□□□ -1.75
Nhlrc3Q8CCH2 4831440E17Rik-201ENSMUST00000181942 1028 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Nhlrc3Q8CCH2 1700052I22Rik-201ENSMUST00000190431 379 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Nhlrc3Q8CCH2 Gm7496-201ENSMUST00000192573 1034 ntBASIC4.14□□□□□ -1.75
Nhlrc3Q8CCH2 Gm44387-201ENSMUST00000196298 145 ntBASIC4.14□□□□□ -1.75
Nhlrc3Q8CCH2 BX530055.1-201ENSMUST00000197285 122 ntBASIC4.14□□□□□ -1.75
Nhlrc3Q8CCH2 Gm9173-201ENSMUST00000198054 400 ntBASIC4.14□□□□□ -1.75
Nhlrc3Q8CCH2 Gm43794-201ENSMUST00000200971 692 ntBASIC4.14□□□□□ -1.75
Nhlrc3Q8CCH2 Gm6230-201ENSMUST00000208077 780 ntBASIC4.14□□□□□ -1.75
Nhlrc3Q8CCH2 AC160635.2-201ENSMUST00000216368 734 ntTSL 5 BASIC4.14□□□□□ -1.75
Nhlrc3Q8CCH2 AC123064.2-201ENSMUST00000217758 193 ntBASIC4.14□□□□□ -1.75
Nhlrc3Q8CCH2 AC153975.1-201ENSMUST00000220087 926 ntBASIC4.14□□□□□ -1.75
Nhlrc3Q8CCH2 Gm40662-201ENSMUST00000222208 453 ntTSL 5 BASIC4.14□□□□□ -1.75
Nhlrc3Q8CCH2 Gm40662-202ENSMUST00000222263 487 ntTSL 5 BASIC4.14□□□□□ -1.75
Nhlrc3Q8CCH2 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Nhlrc3Q8CCH2 AC117949.2-201ENSMUST00000225900 584 ntBASIC4.14□□□□□ -1.75
Nhlrc3Q8CCH2 AC138765.1-201ENSMUST00000228657 385 ntBASIC4.14□□□□□ -1.75
Nhlrc3Q8CCH2 Serpinb3d-201ENSMUST00000023861 1216 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Nhlrc3Q8CCH2 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC4.14□□□□□ -1.75
Nhlrc3Q8CCH2 Vmn1r216-201ENSMUST00000080253 1059 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Nhlrc3Q8CCH2 n-R5s36-201ENSMUST00000082998 119 ntBASIC4.14□□□□□ -1.75
Nhlrc3Q8CCH2 Fpr-rs7-201ENSMUST00000095637 1017 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Nhlrc3Q8CCH2 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Nhlrc3Q8CCH2 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
Nhlrc3Q8CCH2 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Nhlrc3Q8CCH2 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Nhlrc3Q8CCH2 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Nhlrc3Q8CCH2 Gm44822-201ENSMUST00000208559 6389 ntBASIC4.14□□□□□ -1.75
Nhlrc3Q8CCH2 Gm28441-201ENSMUST00000190927 1343 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Nhlrc3Q8CCH2 Iqch-203ENSMUST00000163624 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
Nhlrc3Q8CCH2 Gm37363-201ENSMUST00000192336 2233 ntBASIC4.14□□□□□ -1.75
Nhlrc3Q8CCH2 Ifit2-201ENSMUST00000102826 3818 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Nhlrc3Q8CCH2 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Nhlrc3Q8CCH2 Ctsq-201ENSMUST00000021888 1378 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Nhlrc3Q8CCH2 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Nhlrc3Q8CCH2 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC4.13□□□□□ -1.75
Nhlrc3Q8CCH2 AC139218.1-201ENSMUST00000228215 4287 ntBASIC4.13□□□□□ -1.75
Nhlrc3Q8CCH2 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Nhlrc3Q8CCH2 Gm11743-201ENSMUST00000117385 1735 ntBASIC4.13□□□□□ -1.75
Nhlrc3Q8CCH2 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC4.13□□□□□ -1.75
Nhlrc3Q8CCH2 Igkv15-103-201ENSMUST00000103324 375 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Nhlrc3Q8CCH2 Cypt1-202ENSMUST00000115422 661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
Nhlrc3Q8CCH2 Olfr1050-ps1-201ENSMUST00000119802 947 ntBASIC4.13□□□□□ -1.75
Nhlrc3Q8CCH2 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC4.13□□□□□ -1.75
Nhlrc3Q8CCH2 Gm25295-201ENSMUST00000122794 306 ntBASIC4.13□□□□□ -1.75
Nhlrc3Q8CCH2 Gm13147-201ENSMUST00000125785 585 ntTSL 2 BASIC4.13□□□□□ -1.75
Nhlrc3Q8CCH2 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC4.13□□□□□ -1.75
Nhlrc3Q8CCH2 Gm13330-201ENSMUST00000136400 388 ntTSL 5 BASIC4.13□□□□□ -1.75
Nhlrc3Q8CCH2 9130015L21Rik-201ENSMUST00000140319 606 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Nhlrc3Q8CCH2 Gm24343-201ENSMUST00000158708 111 ntBASIC4.13□□□□□ -1.75
Nhlrc3Q8CCH2 Gm17164-201ENSMUST00000169013 506 ntBASIC4.13□□□□□ -1.75
Nhlrc3Q8CCH2 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC4.13□□□□□ -1.75
Nhlrc3Q8CCH2 Gm8890-202ENSMUST00000177727 465 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
Nhlrc3Q8CCH2 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
Nhlrc3Q8CCH2 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC4.13□□□□□ -1.75
Nhlrc3Q8CCH2 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC4.13□□□□□ -1.75
Nhlrc3Q8CCH2 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC4.13□□□□□ -1.75
Nhlrc3Q8CCH2 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
Nhlrc3Q8CCH2 Prl-201ENSMUST00000018061 886 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
Nhlrc3Q8CCH2 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Nhlrc3Q8CCH2 Gm26983-201ENSMUST00000182051 388 ntBASIC4.13□□□□□ -1.75
Nhlrc3Q8CCH2 Gm27225-201ENSMUST00000183833 557 ntBASIC4.13□□□□□ -1.75
Nhlrc3Q8CCH2 Mir7211-201ENSMUST00000184071 63 ntBASIC4.13□□□□□ -1.75
Nhlrc3Q8CCH2 Mir6244-201ENSMUST00000184156 117 ntBASIC4.13□□□□□ -1.75
Nhlrc3Q8CCH2 Snhg14-202ENSMUST00000185693 734 ntTSL 5 BASIC4.13□□□□□ -1.75
Nhlrc3Q8CCH2 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC4.13□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms