Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm23069-201ENSMUST00000158240 311 ntBASIC4.67□□□□□ -1.66
Trub1Q8C0D0 Gm20397-201ENSMUST00000174520 362 ntBASIC4.67□□□□□ -1.66
Trub1Q8C0D0 Mir3058-201ENSMUST00000175126 91 ntBASIC4.67□□□□□ -1.66
Trub1Q8C0D0 Dlx6os1-204ENSMUST00000184182 146 ntBASIC4.67□□□□□ -1.66
Trub1Q8C0D0 Gm37601-201ENSMUST00000194922 394 ntBASIC4.67□□□□□ -1.66
Trub1Q8C0D0 Gm42999-201ENSMUST00000198049 786 ntBASIC4.67□□□□□ -1.66
Trub1Q8C0D0 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Trub1Q8C0D0 Gm17956-201ENSMUST00000199931 838 ntBASIC4.67□□□□□ -1.66
Trub1Q8C0D0 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Trub1Q8C0D0 Gm38825-201ENSMUST00000204022 648 ntTSL 5 BASIC4.67□□□□□ -1.66
Trub1Q8C0D0 Sprr3-201ENSMUST00000058142 1222 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
Trub1Q8C0D0 Olfr881-201ENSMUST00000074611 948 ntBASIC4.67□□□□□ -1.66
Trub1Q8C0D0 Olfr547-201ENSMUST00000098229 936 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Trub1Q8C0D0 Olfr1249-201ENSMUST00000099769 957 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Trub1Q8C0D0 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
Trub1Q8C0D0 Vmn2r-ps11-201ENSMUST00000176568 2730 ntBASIC4.67□□□□□ -1.66
Trub1Q8C0D0 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Trub1Q8C0D0 Gm42946-201ENSMUST00000196108 2570 ntBASIC4.67□□□□□ -1.66
Trub1Q8C0D0 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Trub1Q8C0D0 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Trub1Q8C0D0 Gm44822-201ENSMUST00000208559 6389 ntBASIC4.67□□□□□ -1.66
Trub1Q8C0D0 Clvs1-201ENSMUST00000038841 3604 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Trub1Q8C0D0 Fam135a-206ENSMUST00000187369 4976 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
Trub1Q8C0D0 Gm38106-201ENSMUST00000194107 2534 ntBASIC4.67□□□□□ -1.66
Trub1Q8C0D0 Vmn2r51-201ENSMUST00000094863 2559 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Trub1Q8C0D0 Olfr481-202ENSMUST00000213601 5247 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Trub1Q8C0D0 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Trub1Q8C0D0 Olfr676-204ENSMUST00000219602 2802 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Trub1Q8C0D0 Igip-201ENSMUST00000210490 1417 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Trub1Q8C0D0 Gm16089-201ENSMUST00000117679 336 ntBASIC4.66□□□□□ -1.66
Trub1Q8C0D0 Gm15206-201ENSMUST00000119143 454 ntBASIC4.66□□□□□ -1.66
Trub1Q8C0D0 Gm12685-201ENSMUST00000121702 214 ntBASIC4.66□□□□□ -1.66
Trub1Q8C0D0 Gm17657-201ENSMUST00000168877 510 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Trub1Q8C0D0 Gm22243-201ENSMUST00000178754 120 ntBASIC4.66□□□□□ -1.66
Trub1Q8C0D0 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC4.66□□□□□ -1.66
Trub1Q8C0D0 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC4.66□□□□□ -1.66
Trub1Q8C0D0 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
Trub1Q8C0D0 Gm20877-202ENSMUST00000191358 1222 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Trub1Q8C0D0 Gm2447-201ENSMUST00000191954 544 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trub1Q8C0D0 Cycs-ps2-201ENSMUST00000197114 292 ntBASIC4.66□□□□□ -1.66
Trub1Q8C0D0 Gm6649-201ENSMUST00000199743 1165 ntBASIC4.66□□□□□ -1.66
Trub1Q8C0D0 Gm42666-201ENSMUST00000201954 152 ntBASIC4.66□□□□□ -1.66
Trub1Q8C0D0 Gm45236-201ENSMUST00000208632 229 ntBASIC4.66□□□□□ -1.66
Trub1Q8C0D0 Gm45610-201ENSMUST00000209227 784 ntBASIC4.66□□□□□ -1.66
Trub1Q8C0D0 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC4.66□□□□□ -1.66
Trub1Q8C0D0 AC124549.1-201ENSMUST00000225912 333 ntBASIC4.66□□□□□ -1.66
Trub1Q8C0D0 Olfr1135-201ENSMUST00000099853 933 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Trub1Q8C0D0 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Trub1Q8C0D0 Vmn2r-ps42-201ENSMUST00000174123 2083 ntBASIC4.66□□□□□ -1.66
Trub1Q8C0D0 Gm14124-201ENSMUST00000109922 3018 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
Trub1Q8C0D0 Gm42729-201ENSMUST00000201770 2930 ntBASIC4.65□□□□□ -1.66
Trub1Q8C0D0 Gm2987-201ENSMUST00000187673 1693 ntBASIC4.65□□□□□ -1.66
Trub1Q8C0D0 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
Trub1Q8C0D0 4930532G15Rik-202ENSMUST00000195314 1457 ntBASIC4.65□□□□□ -1.66
Trub1Q8C0D0 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Trub1Q8C0D0 Mup2-202ENSMUST00000107490 761 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
Trub1Q8C0D0 Gm16128-201ENSMUST00000117855 626 ntBASIC4.65□□□□□ -1.67
Trub1Q8C0D0 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC4.65□□□□□ -1.67
Trub1Q8C0D0 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC4.65□□□□□ -1.67
Trub1Q8C0D0 Gm16332-201ENSMUST00000134229 2967 ntBASIC4.65□□□□□ -1.67
Trub1Q8C0D0 Gm11274-201ENSMUST00000146857 481 ntTSL 2 BASIC4.65□□□□□ -1.67
Trub1Q8C0D0 Gm26373-201ENSMUST00000157833 103 ntBASIC4.65□□□□□ -1.67
Trub1Q8C0D0 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Trub1Q8C0D0 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC4.65□□□□□ -1.67
Trub1Q8C0D0 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.67
Trub1Q8C0D0 C130060C02Rik-201ENSMUST00000181731 1142 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Trub1Q8C0D0 Lockd-204ENSMUST00000184991 243 ntTSL 5 BASIC4.65□□□□□ -1.67
Trub1Q8C0D0 Hmgn3-205ENSMUST00000187193 855 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
Trub1Q8C0D0 Olfr1391-201ENSMUST00000187509 938 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Trub1Q8C0D0 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Trub1Q8C0D0 Gm28830-201ENSMUST00000188192 213 ntBASIC4.65□□□□□ -1.67
Trub1Q8C0D0 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC4.65□□□□□ -1.67
Trub1Q8C0D0 Gm43635-201ENSMUST00000202533 352 ntTSL 3 BASIC4.65□□□□□ -1.67
Trub1Q8C0D0 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC4.65□□□□□ -1.67
Trub1Q8C0D0 AC121986.1-201ENSMUST00000218588 781 ntBASIC4.65□□□□□ -1.67
Trub1Q8C0D0 Rpl29-ps2-202ENSMUST00000220540 1165 ntTSL 5 BASIC4.65□□□□□ -1.67
Trub1Q8C0D0 Rpl29-ps2-203ENSMUST00000222043 1036 ntTSL 5 BASIC4.65□□□□□ -1.67
Trub1Q8C0D0 CT954323.2-201ENSMUST00000222056 213 ntBASIC4.65□□□□□ -1.67
Trub1Q8C0D0 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC4.65□□□□□ -1.67
Trub1Q8C0D0 AC122397.2-201ENSMUST00000227422 686 ntBASIC4.65□□□□□ -1.67
Trub1Q8C0D0 AC164437.2-201ENSMUST00000228915 797 ntBASIC4.65□□□□□ -1.67
Trub1Q8C0D0 Fabp9-201ENSMUST00000029038 583 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Trub1Q8C0D0 Il18-201ENSMUST00000059081 702 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
Trub1Q8C0D0 Apoo-ps-201ENSMUST00000061241 586 ntBASIC4.65□□□□□ -1.67
Trub1Q8C0D0 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
Trub1Q8C0D0 Pramel6-201ENSMUST00000026956 1540 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Trub1Q8C0D0 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
Trub1Q8C0D0 Olfr126-202ENSMUST00000213844 1958 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Trub1Q8C0D0 Olfr372-202ENSMUST00000215324 3542 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Trub1Q8C0D0 Gm15394-201ENSMUST00000119656 1308 ntBASIC4.65□□□□□ -1.67
Trub1Q8C0D0 Gm38057-201ENSMUST00000195551 3203 ntBASIC4.65□□□□□ -1.67
Trub1Q8C0D0 Gm37329-201ENSMUST00000192973 2057 ntBASIC4.65□□□□□ -1.67
Trub1Q8C0D0 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Trub1Q8C0D0 Glyat-202ENSMUST00000119960 3296 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Trub1Q8C0D0 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Trub1Q8C0D0 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
Trub1Q8C0D0 AC102847.2-201ENSMUST00000227799 2906 ntBASIC4.64□□□□□ -1.67
Trub1Q8C0D0 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Trub1Q8C0D0 Clca4c-ps-202ENSMUST00000200595 2779 ntBASIC4.64□□□□□ -1.67
Trub1Q8C0D0 Slamf7-201ENSMUST00000111276 1082 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms