Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm7639-201ENSMUST00000212608 484 ntBASIC7.15□□□□□ -1.26
Usp40Q8BWR4 Gm7368-201ENSMUST00000213307 367 ntBASIC7.15□□□□□ -1.26
Usp40Q8BWR4 AC125543.1-201ENSMUST00000222778 101 ntBASIC7.15□□□□□ -1.26
Usp40Q8BWR4 Olfr1444-201ENSMUST00000059675 1129 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Usp40Q8BWR4 Olfr1407-ps1-201ENSMUST00000085885 797 ntBASIC7.15□□□□□ -1.26
Usp40Q8BWR4 Mir199a-2-201ENSMUST00000093618 110 ntBASIC7.15□□□□□ -1.26
Usp40Q8BWR4 Olfr535-204ENSMUST00000214296 5120 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Usp40Q8BWR4 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
Usp40Q8BWR4 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Usp40Q8BWR4 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC7.15□□□□□ -1.27
Usp40Q8BWR4 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC7.15□□□□□ -1.27
Usp40Q8BWR4 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
Usp40Q8BWR4 Olfr417-203ENSMUST00000220394 6080 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
Usp40Q8BWR4 Olfr132-202ENSMUST00000216804 1913 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
Usp40Q8BWR4 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Usp40Q8BWR4 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Usp40Q8BWR4 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
Usp40Q8BWR4 Gm23879-201ENSMUST00000116874 126 ntBASIC7.14□□□□□ -1.27
Usp40Q8BWR4 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC7.14□□□□□ -1.27
Usp40Q8BWR4 Gm11904-201ENSMUST00000120562 248 ntBASIC7.14□□□□□ -1.27
Usp40Q8BWR4 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC7.14□□□□□ -1.27
Usp40Q8BWR4 Gm15522-201ENSMUST00000134467 785 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Usp40Q8BWR4 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Usp40Q8BWR4 Skint1-204ENSMUST00000162158 1260 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Usp40Q8BWR4 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC7.14□□□□□ -1.27
Usp40Q8BWR4 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC7.14□□□□□ -1.27
Usp40Q8BWR4 Gm24369-201ENSMUST00000175387 96 ntBASIC7.14□□□□□ -1.27
Usp40Q8BWR4 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC7.14□□□□□ -1.27
Usp40Q8BWR4 Mir6416-201ENSMUST00000183664 117 ntBASIC7.14□□□□□ -1.27
Usp40Q8BWR4 Mrgprb13-201ENSMUST00000188191 985 ntBASIC7.14□□□□□ -1.27
Usp40Q8BWR4 Gm9134-201ENSMUST00000193186 551 ntBASIC7.14□□□□□ -1.27
Usp40Q8BWR4 Gm37779-201ENSMUST00000194221 3380 ntBASIC7.14□□□□□ -1.27
Usp40Q8BWR4 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC7.14□□□□□ -1.27
Usp40Q8BWR4 Gm44134-202ENSMUST00000204777 545 ntBASIC7.14□□□□□ -1.27
Usp40Q8BWR4 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC7.14□□□□□ -1.27
Usp40Q8BWR4 Olfr494-201ENSMUST00000209743 1002 ntAPPRIS P1 TSL 3 BASIC7.14□□□□□ -1.27
Usp40Q8BWR4 Gm45262-201ENSMUST00000209917 1463 ntBASIC7.14□□□□□ -1.27
Usp40Q8BWR4 Olfr494-202ENSMUST00000210291 947 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Usp40Q8BWR4 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Usp40Q8BWR4 4930540M03Rik-201ENSMUST00000216952 437 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Usp40Q8BWR4 1700011B04Rik-211ENSMUST00000222690 394 ntTSL 5 BASIC7.14□□□□□ -1.27
Usp40Q8BWR4 AC239878.2-201ENSMUST00000224048 464 ntBASIC7.14□□□□□ -1.27
Usp40Q8BWR4 AC117769.3-201ENSMUST00000225814 1664 ntBASIC7.14□□□□□ -1.27
Usp40Q8BWR4 Tas2r109-201ENSMUST00000067539 951 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Usp40Q8BWR4 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Usp40Q8BWR4 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Usp40Q8BWR4 Vmn1r33-201ENSMUST00000079678 1036 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Usp40Q8BWR4 Rpl36a-ps1-201ENSMUST00000081987 449 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Usp40Q8BWR4 n-R5s170-201ENSMUST00000083726 113 ntBASIC7.14□□□□□ -1.27
Usp40Q8BWR4 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC7.14□□□□□ -1.27
Usp40Q8BWR4 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Usp40Q8BWR4 Nsd1-207ENSMUST00000224973 9905 ntBASIC7.14□□□□□ -1.27
Usp40Q8BWR4 Gm37509-201ENSMUST00000194867 3169 ntBASIC7.14□□□□□ -1.27
Usp40Q8BWR4 Gm44584-201ENSMUST00000208395 2880 ntBASIC7.14□□□□□ -1.27
Usp40Q8BWR4 Olfr237-ps1-203ENSMUST00000216411 4115 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Usp40Q8BWR4 AC155167.2-201ENSMUST00000226127 1945 ntBASIC7.13□□□□□ -1.27
Usp40Q8BWR4 Gm26523-201ENSMUST00000180713 1658 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Usp40Q8BWR4 AC170999.1-201ENSMUST00000226359 1585 ntBASIC7.13□□□□□ -1.27
Usp40Q8BWR4 Casp1-201ENSMUST00000027015 1497 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Usp40Q8BWR4 Gm20679-201ENSMUST00000177285 1402 ntBASIC7.13□□□□□ -1.27
Usp40Q8BWR4 Cts3-201ENSMUST00000054702 1442 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Usp40Q8BWR4 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Usp40Q8BWR4 Obox4-ps27-201ENSMUST00000179203 1362 ntBASIC7.13□□□□□ -1.27
Usp40Q8BWR4 Gm29730-201ENSMUST00000192986 1396 ntBASIC7.13□□□□□ -1.27
Usp40Q8BWR4 Gm43059-201ENSMUST00000202437 1388 ntBASIC7.13□□□□□ -1.27
Usp40Q8BWR4 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Usp40Q8BWR4 Gm11845-201ENSMUST00000117886 327 ntBASIC7.13□□□□□ -1.27
Usp40Q8BWR4 Gm15357-201ENSMUST00000119160 285 ntBASIC7.13□□□□□ -1.27
Usp40Q8BWR4 Gm12288-201ENSMUST00000121054 1282 ntBASIC7.13□□□□□ -1.27
Usp40Q8BWR4 Gm14411-201ENSMUST00000121798 914 ntBASIC7.13□□□□□ -1.27
Usp40Q8BWR4 Gm9498-201ENSMUST00000140849 291 ntBASIC7.13□□□□□ -1.27
Usp40Q8BWR4 Tppp2-202ENSMUST00000177625 627 ntAPPRIS P1 TSL 3 BASIC7.13□□□□□ -1.27
Usp40Q8BWR4 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC7.13□□□□□ -1.27
Usp40Q8BWR4 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC7.13□□□□□ -1.27
Usp40Q8BWR4 Gm28769-201ENSMUST00000190176 615 ntBASIC7.13□□□□□ -1.27
Usp40Q8BWR4 Gm38231-201ENSMUST00000192030 347 ntBASIC7.13□□□□□ -1.27
Usp40Q8BWR4 Gm38146-201ENSMUST00000194121 1293 ntBASIC7.13□□□□□ -1.27
Usp40Q8BWR4 Minpp1-ps-201ENSMUST00000203344 946 ntBASIC7.13□□□□□ -1.27
Usp40Q8BWR4 1700126G02Rik-201ENSMUST00000204351 725 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Usp40Q8BWR4 Gm8035-201ENSMUST00000204625 687 ntBASIC7.13□□□□□ -1.27
Usp40Q8BWR4 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC7.13□□□□□ -1.27
Usp40Q8BWR4 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC7.13□□□□□ -1.27
Usp40Q8BWR4 AC123705.4-202ENSMUST00000221602 697 ntTSL 2 BASIC7.13□□□□□ -1.27
Usp40Q8BWR4 AC099934.5-201ENSMUST00000222699 945 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Usp40Q8BWR4 Gm7040-201ENSMUST00000223271 443 ntBASIC7.13□□□□□ -1.27
Usp40Q8BWR4 AC154184.2-201ENSMUST00000225335 349 ntBASIC7.13□□□□□ -1.27
Usp40Q8BWR4 AC117814.1-201ENSMUST00000226135 352 ntBASIC7.13□□□□□ -1.27
Usp40Q8BWR4 AC125539.2-202ENSMUST00000227983 587 ntBASIC7.13□□□□□ -1.27
Usp40Q8BWR4 AC125539.2-201ENSMUST00000228339 753 ntBASIC7.13□□□□□ -1.27
Usp40Q8BWR4 Olfr720-201ENSMUST00000035250 1023 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Usp40Q8BWR4 Olfr1356-201ENSMUST00000061289 963 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Usp40Q8BWR4 Olfr767-201ENSMUST00000082131 1086 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Usp40Q8BWR4 Gm5444-201ENSMUST00000065956 2468 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Usp40Q8BWR4 Olfr684-203ENSMUST00000215744 3084 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Usp40Q8BWR4 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Usp40Q8BWR4 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Usp40Q8BWR4 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Usp40Q8BWR4 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC7.12□□□□□ -1.27
Usp40Q8BWR4 Il6-203ENSMUST00000199183 2343 ntTSL 2 BASIC7.12□□□□□ -1.27
Usp40Q8BWR4 Gm42721-201ENSMUST00000197165 1523 ntBASIC7.12□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms