Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Ubfd1Q78JW9 Gm21693-201ENSMUST00000178531 1143 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Ubfd1Q78JW9 Gm21677-201ENSMUST00000179508 1143 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Ubfd1Q78JW9 Gm3376-201ENSMUST00000180202 1143 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Ubfd1Q78JW9 Gm21708-201ENSMUST00000180310 1143 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Ubfd1Q78JW9 Mir6400-201ENSMUST00000184870 92 ntBASIC5.21□□□□□ -1.58
Ubfd1Q78JW9 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC5.21□□□□□ -1.58
Ubfd1Q78JW9 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC5.21□□□□□ -1.58
Ubfd1Q78JW9 Gm3933-201ENSMUST00000195391 439 ntBASIC5.21□□□□□ -1.58
Ubfd1Q78JW9 Gm44330-201ENSMUST00000200106 143 ntBASIC5.21□□□□□ -1.58
Ubfd1Q78JW9 Gm43228-201ENSMUST00000200735 264 ntBASIC5.21□□□□□ -1.58
Ubfd1Q78JW9 Gm18861-201ENSMUST00000202509 1186 ntBASIC5.21□□□□□ -1.58
Ubfd1Q78JW9 1700126G02Rik-201ENSMUST00000204351 725 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Ubfd1Q78JW9 Gm40692-201ENSMUST00000220411 491 ntBASIC5.21□□□□□ -1.58
Ubfd1Q78JW9 AC134439.1-201ENSMUST00000220923 600 ntBASIC5.21□□□□□ -1.58
Ubfd1Q78JW9 AC154851.1-201ENSMUST00000221591 655 ntBASIC5.21□□□□□ -1.58
Ubfd1Q78JW9 Vmn1r39-202ENSMUST00000226783 918 ntAPPRIS P2 BASIC5.21□□□□□ -1.58
Ubfd1Q78JW9 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Ubfd1Q78JW9 Vmn1r72-201ENSMUST00000053134 921 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Ubfd1Q78JW9 Amelx-201ENSMUST00000066112 802 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.58
Ubfd1Q78JW9 Gm16415-201ENSMUST00000080097 489 ntBASIC5.21□□□□□ -1.58
Ubfd1Q78JW9 Gm25403-201ENSMUST00000082971 143 ntBASIC5.21□□□□□ -1.58
Ubfd1Q78JW9 Stxbp3-ps-201ENSMUST00000090527 758 ntBASIC5.21□□□□□ -1.58
Ubfd1Q78JW9 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Ubfd1Q78JW9 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Ubfd1Q78JW9 Gm34639-201ENSMUST00000222648 2241 ntTSL 5 BASIC5.21□□□□□ -1.58
Ubfd1Q78JW9 Gm26745-201ENSMUST00000181022 1874 ntTSL 5 BASIC5.21□□□□□ -1.58
Ubfd1Q78JW9 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Ubfd1Q78JW9 Mctp1-205ENSMUST00000126960 1780 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Ubfd1Q78JW9 4931412I15Rik-201ENSMUST00000207844 1448 ntBASIC5.21□□□□□ -1.58
Ubfd1Q78JW9 Dhrs9-201ENSMUST00000063690 4281 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Ubfd1Q78JW9 AC153729.4-201ENSMUST00000217582 3826 ntBASIC5.21□□□□□ -1.58
Ubfd1Q78JW9 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
Ubfd1Q78JW9 AC116726.1-201ENSMUST00000215028 3497 ntBASIC5.21□□□□□ -1.58
Ubfd1Q78JW9 Snhg14-214ENSMUST00000191191 3991 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Ubfd1Q78JW9 AC134860.3-201ENSMUST00000223564 1300 ntBASIC5.21□□□□□ -1.58
Ubfd1Q78JW9 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Ubfd1Q78JW9 Lrrc4c-202ENSMUST00000135431 3646 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Ubfd1Q78JW9 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC5.21□□□□□ -1.58
Ubfd1Q78JW9 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
Ubfd1Q78JW9 Agbl2-204ENSMUST00000111481 3448 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
Ubfd1Q78JW9 Gm37964-201ENSMUST00000192459 4905 ntBASIC5.2□□□□□ -1.58
Ubfd1Q78JW9 Gm45222-201ENSMUST00000207029 4307 ntBASIC5.2□□□□□ -1.58
Ubfd1Q78JW9 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Ubfd1Q78JW9 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Ubfd1Q78JW9 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Ubfd1Q78JW9 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Ubfd1Q78JW9 Adam25-201ENSMUST00000096663 2621 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Ubfd1Q78JW9 Gm37834-201ENSMUST00000194517 3035 ntBASIC5.2□□□□□ -1.58
Ubfd1Q78JW9 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Ubfd1Q78JW9 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Ubfd1Q78JW9 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC5.2□□□□□ -1.58
Ubfd1Q78JW9 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Ubfd1Q78JW9 Gm24789-201ENSMUST00000104282 131 ntBASIC5.2□□□□□ -1.58
Ubfd1Q78JW9 Acbd7-201ENSMUST00000115089 531 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Ubfd1Q78JW9 Gm22194-201ENSMUST00000116869 95 ntBASIC5.2□□□□□ -1.58
Ubfd1Q78JW9 Gm11550-201ENSMUST00000118210 699 ntBASIC5.2□□□□□ -1.58
Ubfd1Q78JW9 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC5.2□□□□□ -1.58
Ubfd1Q78JW9 Gm11447-201ENSMUST00000118983 858 ntBASIC5.2□□□□□ -1.58
Ubfd1Q78JW9 Gm14898-201ENSMUST00000120202 645 ntBASIC5.2□□□□□ -1.58
Ubfd1Q78JW9 Gm14065-201ENSMUST00000120848 585 ntBASIC5.2□□□□□ -1.58
Ubfd1Q78JW9 Prdx6-ps2-201ENSMUST00000121989 694 ntBASIC5.2□□□□□ -1.58
Ubfd1Q78JW9 n-R5s24-201ENSMUST00000122518 117 ntBASIC5.2□□□□□ -1.58
Ubfd1Q78JW9 Gm25293-201ENSMUST00000122792 285 ntBASIC5.2□□□□□ -1.58
Ubfd1Q78JW9 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC5.2□□□□□ -1.58
Ubfd1Q78JW9 Gm13617-201ENSMUST00000155350 675 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Ubfd1Q78JW9 Scarna6-201ENSMUST00000158656 265 ntBASIC5.2□□□□□ -1.58
Ubfd1Q78JW9 Scarna10-201ENSMUST00000158992 325 ntBASIC5.2□□□□□ -1.58
Ubfd1Q78JW9 Gm15838-201ENSMUST00000161575 180 ntBASIC5.2□□□□□ -1.58
Ubfd1Q78JW9 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Ubfd1Q78JW9 Gm9587-201ENSMUST00000172449 454 ntBASIC5.2□□□□□ -1.58
Ubfd1Q78JW9 Gm27355-201ENSMUST00000185045 128 ntBASIC5.2□□□□□ -1.58
Ubfd1Q78JW9 Stk-ps2-204ENSMUST00000187808 616 ntBASIC5.2□□□□□ -1.58
Ubfd1Q78JW9 Gm37134-201ENSMUST00000195810 628 ntTSL 3 BASIC5.2□□□□□ -1.58
Ubfd1Q78JW9 Gm43104-201ENSMUST00000197234 311 ntBASIC5.2□□□□□ -1.58
Ubfd1Q78JW9 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Ubfd1Q78JW9 AC134333.1-201ENSMUST00000204536 944 ntBASIC5.2□□□□□ -1.58
Ubfd1Q78JW9 Olfr588-ps1-202ENSMUST00000210115 912 ntBASIC5.2□□□□□ -1.58
Ubfd1Q78JW9 Gm19921-201ENSMUST00000210505 703 ntBASIC5.2□□□□□ -1.58
Ubfd1Q78JW9 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC5.2□□□□□ -1.58
Ubfd1Q78JW9 Olfr949-ps1-201ENSMUST00000215546 949 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Ubfd1Q78JW9 AC166263.1-201ENSMUST00000218586 238 ntBASIC5.2□□□□□ -1.58
Ubfd1Q78JW9 AC153840.1-201ENSMUST00000219685 313 ntBASIC5.2□□□□□ -1.58
Ubfd1Q78JW9 Gm20368-201ENSMUST00000220716 301 ntBASIC5.2□□□□□ -1.58
Ubfd1Q78JW9 Gm32300-201ENSMUST00000221735 515 ntBASIC5.2□□□□□ -1.58
Ubfd1Q78JW9 Gm3333-202ENSMUST00000221763 1044 ntBASIC5.2□□□□□ -1.58
Ubfd1Q78JW9 AC116395.1-201ENSMUST00000225480 1143 ntBASIC5.2□□□□□ -1.58
Ubfd1Q78JW9 Olfr1442-201ENSMUST00000057924 1065 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Ubfd1Q78JW9 Gm4963-201ENSMUST00000072718 378 ntBASIC5.2□□□□□ -1.58
Ubfd1Q78JW9 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Ubfd1Q78JW9 Olfr1145-201ENSMUST00000079711 945 ntAPPRIS ALT2 BASIC5.2□□□□□ -1.58
Ubfd1Q78JW9 Gm25131-201ENSMUST00000082653 151 ntBASIC5.2□□□□□ -1.58
Ubfd1Q78JW9 Olfr1145-202ENSMUST00000090707 978 ntAPPRIS P2 BASIC5.2□□□□□ -1.58
Ubfd1Q78JW9 Gm42798-201ENSMUST00000200853 3972 ntBASIC5.2□□□□□ -1.58
Ubfd1Q78JW9 AC116797.1-201ENSMUST00000223988 3955 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Ubfd1Q78JW9 Olfr129-202ENSMUST00000216476 5275 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
Ubfd1Q78JW9 Gm42496-201ENSMUST00000197976 3241 ntBASIC5.2□□□□□ -1.58
Ubfd1Q78JW9 Vmn2r34-201ENSMUST00000173459 3616 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Ubfd1Q78JW9 Gm37370-201ENSMUST00000191996 1410 ntBASIC5.2□□□□□ -1.58
Ubfd1Q78JW9 Zfp184-205ENSMUST00000176511 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms