Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm26680-203ENSMUST00000181701 2078 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Nup98Q6PFD9 Gm26630-204ENSMUST00000181759 2078 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Nup98Q6PFD9 Gm26650-204ENSMUST00000181881 2078 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Nup98Q6PFD9 AC174797.3-203ENSMUST00000225749 2078 ntBASIC5.31□□□□□ -1.56
Nup98Q6PFD9 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Nup98Q6PFD9 Olfr329-ps-203ENSMUST00000219448 4052 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
Nup98Q6PFD9 Gm15394-201ENSMUST00000119656 1308 ntBASIC5.3□□□□□ -1.56
Nup98Q6PFD9 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Nup98Q6PFD9 Gm16394-201ENSMUST00000117289 675 ntBASIC5.3□□□□□ -1.56
Nup98Q6PFD9 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC5.3□□□□□ -1.56
Nup98Q6PFD9 Gm14619-201ENSMUST00000120480 168 ntBASIC5.3□□□□□ -1.56
Nup98Q6PFD9 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC5.3□□□□□ -1.56
Nup98Q6PFD9 Trbv11-201ENSMUST00000194354 260 ntBASIC5.3□□□□□ -1.56
Nup98Q6PFD9 Gm35702-201ENSMUST00000198653 511 ntBASIC5.3□□□□□ -1.56
Nup98Q6PFD9 AC133189.1-201ENSMUST00000198820 140 ntBASIC5.3□□□□□ -1.56
Nup98Q6PFD9 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Nup98Q6PFD9 Gm44650-201ENSMUST00000206929 194 ntBASIC5.3□□□□□ -1.56
Nup98Q6PFD9 AC154335.1-201ENSMUST00000224744 395 ntBASIC5.3□□□□□ -1.56
Nup98Q6PFD9 Mup3-201ENSMUST00000084531 938 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Nup98Q6PFD9 Gm42478-201ENSMUST00000199252 1467 ntBASIC5.3□□□□□ -1.56
Nup98Q6PFD9 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC5.3□□□□□ -1.56
Nup98Q6PFD9 Gm45211-201ENSMUST00000206208 2650 ntBASIC5.3□□□□□ -1.56
Nup98Q6PFD9 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Nup98Q6PFD9 Gm42992-201ENSMUST00000197043 6836 ntBASIC5.3□□□□□ -1.56
Nup98Q6PFD9 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Nup98Q6PFD9 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Nup98Q6PFD9 AC153532.2-201ENSMUST00000219753 3844 ntBASIC5.3□□□□□ -1.56
Nup98Q6PFD9 Gm8765-201ENSMUST00000099518 3152 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Nup98Q6PFD9 Ctsm-201ENSMUST00000099451 1457 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Nup98Q6PFD9 Gm22789-201ENSMUST00000157884 130 ntBASIC5.3□□□□□ -1.56
Nup98Q6PFD9 Gm25713-201ENSMUST00000158625 109 ntBASIC5.3□□□□□ -1.56
Nup98Q6PFD9 Gm22367-201ENSMUST00000178930 132 ntBASIC5.3□□□□□ -1.56
Nup98Q6PFD9 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC5.3□□□□□ -1.56
Nup98Q6PFD9 Ly6a-203ENSMUST00000187171 853 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Nup98Q6PFD9 Gm29133-201ENSMUST00000189155 885 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Nup98Q6PFD9 Gm29428-201ENSMUST00000190086 409 ntBASIC5.3□□□□□ -1.56
Nup98Q6PFD9 Gm37505-201ENSMUST00000195670 461 ntTSL 5 BASIC5.3□□□□□ -1.56
Nup98Q6PFD9 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Nup98Q6PFD9 Olfr285-202ENSMUST00000216901 5330 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Nup98Q6PFD9 Gm43577-201ENSMUST00000197090 3344 ntBASIC5.29□□□□□ -1.56
Nup98Q6PFD9 Gm14661-201ENSMUST00000152669 2051 ntTSL 5 BASIC5.29□□□□□ -1.56
Nup98Q6PFD9 Olfr571-203ENSMUST00000215773 5153 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Nup98Q6PFD9 Olfr635-202ENSMUST00000209473 8565 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Nup98Q6PFD9 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Nup98Q6PFD9 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
Nup98Q6PFD9 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Nup98Q6PFD9 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Nup98Q6PFD9 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC5.29□□□□□ -1.56
Nup98Q6PFD9 Gm12062-201ENSMUST00000117533 259 ntBASIC5.29□□□□□ -1.56
Nup98Q6PFD9 Igfl3-201ENSMUST00000152973 575 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Nup98Q6PFD9 Gm23905-201ENSMUST00000157568 109 ntBASIC5.29□□□□□ -1.56
Nup98Q6PFD9 Gm5258-201ENSMUST00000165437 327 ntBASIC5.29□□□□□ -1.56
Nup98Q6PFD9 Mir5106-201ENSMUST00000174936 73 ntBASIC5.29□□□□□ -1.56
Nup98Q6PFD9 Mir5134-201ENSMUST00000175529 78 ntBASIC5.29□□□□□ -1.56
Nup98Q6PFD9 Gm27695-201ENSMUST00000184301 91 ntBASIC5.29□□□□□ -1.56
Nup98Q6PFD9 Gm28889-201ENSMUST00000185350 959 ntTSL 5 BASIC5.29□□□□□ -1.56
Nup98Q6PFD9 Gm29426-202ENSMUST00000186564 536 ntTSL 5 BASIC5.29□□□□□ -1.56
Nup98Q6PFD9 Gm3143-201ENSMUST00000196308 580 ntTSL 3 BASIC5.29□□□□□ -1.56
Nup98Q6PFD9 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC5.29□□□□□ -1.56
Nup98Q6PFD9 Trav7-5-201ENSMUST00000200609 337 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Nup98Q6PFD9 Gm43441-201ENSMUST00000201458 205 ntBASIC5.29□□□□□ -1.56
Nup98Q6PFD9 AC119241.1-201ENSMUST00000223651 534 ntBASIC5.29□□□□□ -1.56
Nup98Q6PFD9 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Nup98Q6PFD9 Olfr1311-202ENSMUST00000213602 2631 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Nup98Q6PFD9 Gm6162-201ENSMUST00000194870 2930 ntBASIC5.29□□□□□ -1.56
Nup98Q6PFD9 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Nup98Q6PFD9 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Nup98Q6PFD9 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Nup98Q6PFD9 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Nup98Q6PFD9 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Nup98Q6PFD9 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC5.28□□□□□ -1.56
Nup98Q6PFD9 Gm6062-201ENSMUST00000120462 631 ntBASIC5.28□□□□□ -1.56
Nup98Q6PFD9 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Nup98Q6PFD9 Gm14095-201ENSMUST00000134264 516 ntTSL 3 BASIC5.28□□□□□ -1.56
Nup98Q6PFD9 Gm8890-202ENSMUST00000177727 465 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
Nup98Q6PFD9 RMST_1.1-204ENSMUST00000217871 699 ntTSL 5 BASIC5.28□□□□□ -1.56
Nup98Q6PFD9 AC114573.1-201ENSMUST00000224120 1210 ntBASIC5.28□□□□□ -1.56
Nup98Q6PFD9 AL606513.1-201ENSMUST00000225369 579 ntBASIC5.28□□□□□ -1.56
Nup98Q6PFD9 Olfr1507-201ENSMUST00000073571 1112 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Nup98Q6PFD9 Mir346-201ENSMUST00000083547 98 ntBASIC5.28□□□□□ -1.56
Nup98Q6PFD9 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Nup98Q6PFD9 Mga-201ENSMUST00000046717 11982 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
Nup98Q6PFD9 Creb5-212ENSMUST00000205120 7482 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Nup98Q6PFD9 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Nup98Q6PFD9 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Nup98Q6PFD9 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC5.28□□□□□ -1.56
Nup98Q6PFD9 Gm38057-201ENSMUST00000195551 3203 ntBASIC5.28□□□□□ -1.56
Nup98Q6PFD9 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Nup98Q6PFD9 Gm43209-201ENSMUST00000198949 1588 ntBASIC5.28□□□□□ -1.56
Nup98Q6PFD9 CT025675.1-201ENSMUST00000228171 1567 ntBASIC5.28□□□□□ -1.56
Nup98Q6PFD9 Gm11485-201ENSMUST00000120048 1175 ntBASIC5.27□□□□□ -1.57
Nup98Q6PFD9 Gm25290-201ENSMUST00000122796 144 ntBASIC5.27□□□□□ -1.57
Nup98Q6PFD9 Gm25264-201ENSMUST00000158519 117 ntBASIC5.27□□□□□ -1.57
Nup98Q6PFD9 Gm28619-201ENSMUST00000185889 622 ntTSL 5 BASIC5.27□□□□□ -1.57
Nup98Q6PFD9 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC5.27□□□□□ -1.57
Nup98Q6PFD9 Gm37231-201ENSMUST00000191716 621 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Nup98Q6PFD9 Gm38159-202ENSMUST00000194145 621 ntTSL 5 BASIC5.27□□□□□ -1.57
Nup98Q6PFD9 Gm37734-201ENSMUST00000194294 621 ntTSL 5 BASIC5.27□□□□□ -1.57
Nup98Q6PFD9 Gm36941-202ENSMUST00000194799 621 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Nup98Q6PFD9 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC5.27□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms