Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC11□□□□□ -0.65
Trim41Q5NCC3 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC11□□□□□ -0.65
Trim41Q5NCC3 1300002E11Rik-206ENSMUST00000209728 701 ntTSL 2 BASIC11□□□□□ -0.65
Trim41Q5NCC3 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trim41Q5NCC3 AC132437.1-201ENSMUST00000218308 320 ntBASIC11□□□□□ -0.65
Trim41Q5NCC3 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC11□□□□□ -0.65
Trim41Q5NCC3 AC163646.1-201ENSMUST00000227704 397 ntBASIC11□□□□□ -0.65
Trim41Q5NCC3 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trim41Q5NCC3 A230028O05Rik-201ENSMUST00000181655 2793 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trim41Q5NCC3 Gm42837-201ENSMUST00000197071 2829 ntBASIC11□□□□□ -0.65
Trim41Q5NCC3 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Trim41Q5NCC3 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
Trim41Q5NCC3 AC117232.2-201ENSMUST00000219469 2917 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trim41Q5NCC3 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trim41Q5NCC3 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC11□□□□□ -0.65
Trim41Q5NCC3 AC122346.1-201ENSMUST00000225266 3732 ntBASIC10.99□□□□□ -0.65
Trim41Q5NCC3 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim41Q5NCC3 Srrm4os-201ENSMUST00000126959 3360 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trim41Q5NCC3 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trim41Q5NCC3 Cept1-201ENSMUST00000039153 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim41Q5NCC3 Gm37086-201ENSMUST00000193082 3452 ntBASIC10.99□□□□□ -0.65
Trim41Q5NCC3 Gm43872-201ENSMUST00000203218 2213 ntBASIC10.99□□□□□ -0.65
Trim41Q5NCC3 Gm8297-202ENSMUST00000171964 1759 ntAPPRIS P5 TSL 5 BASIC10.99□□□□□ -0.65
Trim41Q5NCC3 Ighv5-16-201ENSMUST00000103458 350 ntAPPRIS ALT2 BASIC10.99□□□□□ -0.65
Trim41Q5NCC3 Mir466b-8-201ENSMUST00000103883 86 ntBASIC10.99□□□□□ -0.65
Trim41Q5NCC3 Gm22952-201ENSMUST00000116720 120 ntBASIC10.99□□□□□ -0.65
Trim41Q5NCC3 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC10.99□□□□□ -0.65
Trim41Q5NCC3 Gm23069-201ENSMUST00000158240 311 ntBASIC10.99□□□□□ -0.65
Trim41Q5NCC3 Gm17472-201ENSMUST00000167638 352 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Trim41Q5NCC3 Pafah1b1-ps1-201ENSMUST00000181263 1046 ntBASIC10.99□□□□□ -0.65
Trim41Q5NCC3 Gm28069-201ENSMUST00000189926 214 ntBASIC10.99□□□□□ -0.65
Trim41Q5NCC3 Mir466e-201ENSMUST00000198862 84 ntBASIC10.99□□□□□ -0.65
Trim41Q5NCC3 Mir466c-1-201ENSMUST00000200654 84 ntBASIC10.99□□□□□ -0.65
Trim41Q5NCC3 Gm43440-201ENSMUST00000201957 729 ntBASIC10.99□□□□□ -0.65
Trim41Q5NCC3 Gm7760-201ENSMUST00000212265 578 ntBASIC10.99□□□□□ -0.65
Trim41Q5NCC3 Gm7807-201ENSMUST00000212475 578 ntBASIC10.99□□□□□ -0.65
Trim41Q5NCC3 AC154709.1-201ENSMUST00000222304 446 ntTSL 3 BASIC10.99□□□□□ -0.65
Trim41Q5NCC3 n-R5s37-201ENSMUST00000082533 118 ntBASIC10.99□□□□□ -0.65
Trim41Q5NCC3 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC10.99□□□□□ -0.65
Trim41Q5NCC3 Gm10356-201ENSMUST00000097152 1258 ntBASIC10.99□□□□□ -0.65
Trim41Q5NCC3 Olfr1110-201ENSMUST00000099861 939 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Trim41Q5NCC3 Celf2-226ENSMUST00000183209 3852 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trim41Q5NCC3 Gm37206-201ENSMUST00000195512 3069 ntBASIC10.99□□□□□ -0.65
Trim41Q5NCC3 Tmprss15-202ENSMUST00000060402 3681 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
Trim41Q5NCC3 Akap13-205ENSMUST00000207750 12597 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Trim41Q5NCC3 Olfr417-202ENSMUST00000217962 5662 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Trim41Q5NCC3 Gm43314-201ENSMUST00000196744 2231 ntBASIC10.99□□□□□ -0.65
Trim41Q5NCC3 Gm43637-201ENSMUST00000202206 2926 ntBASIC10.98□□□□□ -0.65
Trim41Q5NCC3 1810064F22Rik-203ENSMUST00000188595 2307 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trim41Q5NCC3 Mapre2-202ENSMUST00000115830 2496 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trim41Q5NCC3 Gm43961-201ENSMUST00000203289 1872 ntBASIC10.98□□□□□ -0.65
Trim41Q5NCC3 Olfr1440-202ENSMUST00000213657 7588 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Trim41Q5NCC3 Gm44255-201ENSMUST00000203456 2053 ntBASIC10.98□□□□□ -0.65
Trim41Q5NCC3 Gm11227-201ENSMUST00000119774 471 ntBASIC10.98□□□□□ -0.65
Trim41Q5NCC3 Ftx-201ENSMUST00000123841 673 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trim41Q5NCC3 Gm2020-201ENSMUST00000145242 579 ntBASIC10.98□□□□□ -0.65
Trim41Q5NCC3 Gm16269-201ENSMUST00000160532 409 ntBASIC10.98□□□□□ -0.65
Trim41Q5NCC3 Gm17223-201ENSMUST00000171413 481 ntBASIC10.98□□□□□ -0.65
Trim41Q5NCC3 Sptssb-202ENSMUST00000171529 772 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trim41Q5NCC3 Mir3080-201ENSMUST00000175010 79 ntBASIC10.98□□□□□ -0.65
Trim41Q5NCC3 Rab26os-202ENSMUST00000176921 298 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trim41Q5NCC3 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Trim41Q5NCC3 Gm27402-201ENSMUST00000183890 120 ntBASIC10.98□□□□□ -0.65
Trim41Q5NCC3 Gm37103-201ENSMUST00000191830 115 ntBASIC10.98□□□□□ -0.65
Trim41Q5NCC3 Alox5ap-203ENSMUST00000200928 356 ntTSL 3 BASIC10.98□□□□□ -0.65
Trim41Q5NCC3 Gm43700-201ENSMUST00000200967 316 ntTSL 5 BASIC10.98□□□□□ -0.65
Trim41Q5NCC3 AC132384.3-201ENSMUST00000219709 472 ntBASIC10.98□□□□□ -0.65
Trim41Q5NCC3 AC154484.2-201ENSMUST00000228359 818 ntBASIC10.98□□□□□ -0.65
Trim41Q5NCC3 Olfr738-201ENSMUST00000058972 936 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Trim41Q5NCC3 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Trim41Q5NCC3 Gm28392-201ENSMUST00000077630 393 ntBASIC10.98□□□□□ -0.65
Trim41Q5NCC3 Gm25859-201ENSMUST00000083710 91 ntBASIC10.98□□□□□ -0.65
Trim41Q5NCC3 Gm5890-201ENSMUST00000190145 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trim41Q5NCC3 Gm7646-201ENSMUST00000198590 1346 ntBASIC10.98□□□□□ -0.65
Trim41Q5NCC3 AC159326.1-201ENSMUST00000219989 1302 ntBASIC10.98□□□□□ -0.65
Trim41Q5NCC3 Gm5594-201ENSMUST00000172712 1429 ntBASIC10.98□□□□□ -0.65
Trim41Q5NCC3 Cltc-201ENSMUST00000060766 6163 ntTSL 5 BASIC10.98□□□□□ -0.65
Trim41Q5NCC3 Plch1-213ENSMUST00000177143 6010 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Trim41Q5NCC3 4930550L24Rik-202ENSMUST00000118305 1684 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
Trim41Q5NCC3 Gm16751-201ENSMUST00000142212 1685 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trim41Q5NCC3 Agps-203ENSMUST00000175646 1839 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Trim41Q5NCC3 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Trim41Q5NCC3 Frmpd4-202ENSMUST00000112146 8153 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trim41Q5NCC3 C130089K02Rik-201ENSMUST00000194534 6960 ntBASIC10.98□□□□□ -0.65
Trim41Q5NCC3 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trim41Q5NCC3 AC120347.2-201ENSMUST00000222224 2015 ntBASIC10.97□□□□□ -0.65
Trim41Q5NCC3 Nudt5-201ENSMUST00000026927 4764 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
Trim41Q5NCC3 Vmn1r31-205ENSMUST00000228586 2115 ntAPPRIS P2 BASIC10.97□□□□□ -0.65
Trim41Q5NCC3 Kcnj16-206ENSMUST00000180023 3701 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
Trim41Q5NCC3 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim41Q5NCC3 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim41Q5NCC3 Gm36936-201ENSMUST00000194508 2749 ntBASIC10.97□□□□□ -0.65
Trim41Q5NCC3 Fhl4-201ENSMUST00000059383 3402 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim41Q5NCC3 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim41Q5NCC3 Gm11909-201ENSMUST00000121424 759 ntBASIC10.97□□□□□ -0.65
Trim41Q5NCC3 Gm22383-201ENSMUST00000158188 327 ntBASIC10.97□□□□□ -0.65
Trim41Q5NCC3 Obox3-ps6-201ENSMUST00000176273 1005 ntBASIC10.97□□□□□ -0.65
Trim41Q5NCC3 Obox3-ps5-201ENSMUST00000176412 1003 ntBASIC10.97□□□□□ -0.65
Trim41Q5NCC3 Gm25874-201ENSMUST00000178030 79 ntBASIC10.97□□□□□ -0.65
Trim41Q5NCC3 Gm26177-201ENSMUST00000178683 107 ntBASIC10.97□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 96.6 ms