Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Gm22488-201ENSMUST00000116811 127 ntBASIC5.01□□□□□ -1.61
Upf3aQ3ULJ3 Gm15022-201ENSMUST00000122074 746 ntBASIC5.01□□□□□ -1.61
Upf3aQ3ULJ3 4930519F16Rik-202ENSMUST00000127012 685 ntTSL 3 BASIC5.01□□□□□ -1.61
Upf3aQ3ULJ3 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC5.01□□□□□ -1.61
Upf3aQ3ULJ3 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC5.01□□□□□ -1.61
Upf3aQ3ULJ3 Gm24774-201ENSMUST00000157384 134 ntBASIC5.01□□□□□ -1.61
Upf3aQ3ULJ3 Gm25048-201ENSMUST00000158598 91 ntBASIC5.01□□□□□ -1.61
Upf3aQ3ULJ3 Gm17657-201ENSMUST00000168877 510 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Upf3aQ3ULJ3 Gm27805-201ENSMUST00000184513 79 ntBASIC5.01□□□□□ -1.61
Upf3aQ3ULJ3 2610012C04Rik-201ENSMUST00000193434 1023 ntBASIC5.01□□□□□ -1.61
Upf3aQ3ULJ3 Gm37190-201ENSMUST00000193580 688 ntTSL 5 BASIC5.01□□□□□ -1.61
Upf3aQ3ULJ3 Mirlet7e-201ENSMUST00000196737 93 ntBASIC5.01□□□□□ -1.61
Upf3aQ3ULJ3 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC5.01□□□□□ -1.61
Upf3aQ3ULJ3 Gm18258-201ENSMUST00000210413 542 ntBASIC5.01□□□□□ -1.61
Upf3aQ3ULJ3 CT025617.1-201ENSMUST00000216487 725 ntTSL 5 BASIC5.01□□□□□ -1.61
Upf3aQ3ULJ3 AC073947.1-201ENSMUST00000216991 649 ntBASIC5.01□□□□□ -1.61
Upf3aQ3ULJ3 Gm8288-201ENSMUST00000223406 593 ntBASIC5.01□□□□□ -1.61
Upf3aQ3ULJ3 AC160962.1-203ENSMUST00000225167 1105 ntAPPRIS P5 BASIC5.01□□□□□ -1.61
Upf3aQ3ULJ3 AC168881.1-201ENSMUST00000226018 430 ntBASIC5.01□□□□□ -1.61
Upf3aQ3ULJ3 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Upf3aQ3ULJ3 Gm10145-201ENSMUST00000077776 462 ntBASIC5.01□□□□□ -1.61
Upf3aQ3ULJ3 Gm44518-201ENSMUST00000208080 4370 ntBASIC5.01□□□□□ -1.61
Upf3aQ3ULJ3 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC5.01□□□□□ -1.61
Upf3aQ3ULJ3 Gm29301-202ENSMUST00000189344 1502 ntTSL 5 BASIC5.01□□□□□ -1.61
Upf3aQ3ULJ3 Btbd35f21-201ENSMUST00000105017 1943 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Upf3aQ3ULJ3 Btbd35f2-201ENSMUST00000179991 1949 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Upf3aQ3ULJ3 Btbd35f16-201ENSMUST00000185755 1949 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Upf3aQ3ULJ3 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
Upf3aQ3ULJ3 Gm16185-201ENSMUST00000125071 3207 ntTSL 5 BASIC5.01□□□□□ -1.61
Upf3aQ3ULJ3 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC5□□□□□ -1.61
Upf3aQ3ULJ3 Pgap1-201ENSMUST00000097739 10583 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Upf3aQ3ULJ3 Olfr107-204ENSMUST00000215974 2282 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Upf3aQ3ULJ3 Ank2-207ENSMUST00000182064 12413 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
Upf3aQ3ULJ3 Abcg2-201ENSMUST00000031822 5717 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Upf3aQ3ULJ3 Olfr965-203ENSMUST00000215164 1722 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Upf3aQ3ULJ3 Olfr1300-ps1-201ENSMUST00000208175 2235 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Upf3aQ3ULJ3 Gm43085-201ENSMUST00000202859 3132 ntBASIC5□□□□□ -1.61
Upf3aQ3ULJ3 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC5□□□□□ -1.61
Upf3aQ3ULJ3 Rgsl1-201ENSMUST00000124558 3642 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Upf3aQ3ULJ3 Mir761-201ENSMUST00000103245 76 ntBASIC5□□□□□ -1.61
Upf3aQ3ULJ3 Trbv20-201ENSMUST00000103277 335 ntAPPRIS P1 BASIC5□□□□□ -1.61
Upf3aQ3ULJ3 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
Upf3aQ3ULJ3 Gm11200-201ENSMUST00000121698 448 ntBASIC5□□□□□ -1.61
Upf3aQ3ULJ3 Gm13232-201ENSMUST00000121816 632 ntBASIC5□□□□□ -1.61
Upf3aQ3ULJ3 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC5□□□□□ -1.61
Upf3aQ3ULJ3 Gm14410-202ENSMUST00000133301 1113 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
Upf3aQ3ULJ3 4930558K02Rik-202ENSMUST00000162676 983 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
Upf3aQ3ULJ3 Gm6337-202ENSMUST00000170613 997 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
Upf3aQ3ULJ3 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC5□□□□□ -1.61
Upf3aQ3ULJ3 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC5□□□□□ -1.61
Upf3aQ3ULJ3 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC5□□□□□ -1.61
Upf3aQ3ULJ3 Gm26992-201ENSMUST00000182089 468 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
Upf3aQ3ULJ3 Gm24949-201ENSMUST00000183609 215 ntBASIC5□□□□□ -1.61
Upf3aQ3ULJ3 Gm28543-201ENSMUST00000188986 509 ntTSL 5 BASIC5□□□□□ -1.61
Upf3aQ3ULJ3 Gm44176-201ENSMUST00000204336 276 ntTSL 5 BASIC5□□□□□ -1.61
Upf3aQ3ULJ3 Tas2r145-ps3-201ENSMUST00000204526 992 ntBASIC5□□□□□ -1.61
Upf3aQ3ULJ3 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC5□□□□□ -1.61
Upf3aQ3ULJ3 Gm45081-201ENSMUST00000206281 572 ntBASIC5□□□□□ -1.61
Upf3aQ3ULJ3 AC156801.2-201ENSMUST00000213613 487 ntTSL 5 BASIC5□□□□□ -1.61
Upf3aQ3ULJ3 AC105169.1-201ENSMUST00000218912 1294 ntBASIC5□□□□□ -1.61
Upf3aQ3ULJ3 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC5□□□□□ -1.61
Upf3aQ3ULJ3 CT009765.2-201ENSMUST00000221331 392 ntBASIC5□□□□□ -1.61
Upf3aQ3ULJ3 Obp1b-201ENSMUST00000088198 797 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Upf3aQ3ULJ3 n-R5s27-201ENSMUST00000093699 119 ntBASIC5□□□□□ -1.61
Upf3aQ3ULJ3 Wdr64-201ENSMUST00000094288 3817 ntAPPRIS P2 TSL 5 BASIC5□□□□□ -1.61
Upf3aQ3ULJ3 Olfr1107-201ENSMUST00000099865 1109 ntAPPRIS P1 BASIC5□□□□□ -1.61
Upf3aQ3ULJ3 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
Upf3aQ3ULJ3 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
Upf3aQ3ULJ3 Gm14929-201ENSMUST00000152079 1850 ntTSL 1 (best) BASIC5□□□□□ -1.61
Upf3aQ3ULJ3 Gm42535-201ENSMUST00000197312 1399 ntBASIC5□□□□□ -1.61
Upf3aQ3ULJ3 Gm13961-201ENSMUST00000119282 4772 ntBASIC5□□□□□ -1.61
Upf3aQ3ULJ3 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC5□□□□□ -1.61
Upf3aQ3ULJ3 Gm43920-201ENSMUST00000204953 2159 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Upf3aQ3ULJ3 Vmn1r5-202ENSMUST00000226130 3393 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Upf3aQ3ULJ3 Gm33594-201ENSMUST00000209502 1333 ntTSL 5 BASIC4.99□□□□□ -1.61
Upf3aQ3ULJ3 Kcnt2-202ENSMUST00000120709 5790 ntTSL 5 BASIC4.99□□□□□ -1.61
Upf3aQ3ULJ3 Olfr1057-202ENSMUST00000217435 3249 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Upf3aQ3ULJ3 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Upf3aQ3ULJ3 Hormad1-204ENSMUST00000171191 1437 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
Upf3aQ3ULJ3 Olfr481-202ENSMUST00000213601 5247 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Upf3aQ3ULJ3 Havcr2-201ENSMUST00000020668 2721 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Upf3aQ3ULJ3 Spp1-204ENSMUST00000112747 1507 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
Upf3aQ3ULJ3 Gm31258-201ENSMUST00000194532 3297 ntBASIC4.99□□□□□ -1.61
Upf3aQ3ULJ3 Med14-203ENSMUST00000115481 3729 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Upf3aQ3ULJ3 AC154184.1-201ENSMUST00000224375 1620 ntBASIC4.99□□□□□ -1.61
Upf3aQ3ULJ3 Gm12852-201ENSMUST00000119478 719 ntBASIC4.99□□□□□ -1.61
Upf3aQ3ULJ3 Klra14-ps-201ENSMUST00000119532 802 ntBASIC4.99□□□□□ -1.61
Upf3aQ3ULJ3 Olfr336-ps1-201ENSMUST00000120897 940 ntBASIC4.99□□□□□ -1.61
Upf3aQ3ULJ3 Gm24689-201ENSMUST00000157760 104 ntBASIC4.99□□□□□ -1.61
Upf3aQ3ULJ3 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Upf3aQ3ULJ3 Gm27266-201ENSMUST00000184521 123 ntBASIC4.99□□□□□ -1.61
Upf3aQ3ULJ3 Gm28859-201ENSMUST00000186650 616 ntBASIC4.99□□□□□ -1.61
Upf3aQ3ULJ3 Gm37030-201ENSMUST00000194254 295 ntBASIC4.99□□□□□ -1.61
Upf3aQ3ULJ3 Gm37712-201ENSMUST00000194295 647 ntTSL 3 BASIC4.99□□□□□ -1.61
Upf3aQ3ULJ3 Gm37659-201ENSMUST00000194574 111 ntBASIC4.99□□□□□ -1.61
Upf3aQ3ULJ3 Gm44474-201ENSMUST00000196525 127 ntBASIC4.99□□□□□ -1.61
Upf3aQ3ULJ3 Gm44277-201ENSMUST00000205128 649 ntBASIC4.99□□□□□ -1.61
Upf3aQ3ULJ3 Gm19170-201ENSMUST00000212440 1084 ntBASIC4.99□□□□□ -1.61
Upf3aQ3ULJ3 Gm45910-201ENSMUST00000212493 1003 ntBASIC4.99□□□□□ -1.61
Upf3aQ3ULJ3 AC153729.2-201ENSMUST00000215166 560 ntTSL 3 BASIC4.99□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 103.1 ms