Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Gm6068-201ENSMUST00000222270 387 ntBASIC5.38□□□□□ -1.55
Usp39Q3TIX9 Gm9202-201ENSMUST00000223036 437 ntBASIC5.38□□□□□ -1.55
Usp39Q3TIX9 AC154556.1-201ENSMUST00000224587 885 ntBASIC5.38□□□□□ -1.55
Usp39Q3TIX9 Gm5830-201ENSMUST00000049117 443 ntBASIC5.38□□□□□ -1.55
Usp39Q3TIX9 H2-M9-201ENSMUST00000087165 1125 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Usp39Q3TIX9 Defa31-201ENSMUST00000098896 377 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Usp39Q3TIX9 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Usp39Q3TIX9 AC116797.1-201ENSMUST00000223988 3955 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Usp39Q3TIX9 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Usp39Q3TIX9 Olfr228-202ENSMUST00000217292 1854 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Usp39Q3TIX9 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
Usp39Q3TIX9 Piga-202ENSMUST00000112255 3597 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Usp39Q3TIX9 Olfr1238-203ENSMUST00000217237 5761 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Usp39Q3TIX9 Gm38189-201ENSMUST00000194495 1457 ntBASIC5.38□□□□□ -1.55
Usp39Q3TIX9 Gm45262-201ENSMUST00000209917 1463 ntBASIC5.38□□□□□ -1.55
Usp39Q3TIX9 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Usp39Q3TIX9 Olfr329-ps-203ENSMUST00000219448 4052 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
Usp39Q3TIX9 Gm37332-201ENSMUST00000195853 2844 ntBASIC5.38□□□□□ -1.55
Usp39Q3TIX9 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Usp39Q3TIX9 Dazl-201ENSMUST00000010736 2942 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Usp39Q3TIX9 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC5.37□□□□□ -1.55
Usp39Q3TIX9 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Usp39Q3TIX9 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
Usp39Q3TIX9 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC5.37□□□□□ -1.55
Usp39Q3TIX9 AW046200-203ENSMUST00000211787 2479 ntBASIC5.37□□□□□ -1.55
Usp39Q3TIX9 Gm38387-201ENSMUST00000191945 2577 ntBASIC5.37□□□□□ -1.55
Usp39Q3TIX9 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
Usp39Q3TIX9 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
Usp39Q3TIX9 AC116726.1-201ENSMUST00000215028 3497 ntBASIC5.37□□□□□ -1.55
Usp39Q3TIX9 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Usp39Q3TIX9 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC5.37□□□□□ -1.55
Usp39Q3TIX9 Gm42606-201ENSMUST00000114209 239 ntBASIC5.37□□□□□ -1.55
Usp39Q3TIX9 Gm12131-201ENSMUST00000117479 359 ntBASIC5.37□□□□□ -1.55
Usp39Q3TIX9 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC5.37□□□□□ -1.55
Usp39Q3TIX9 Gm7079-201ENSMUST00000119726 171 ntBASIC5.37□□□□□ -1.55
Usp39Q3TIX9 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Usp39Q3TIX9 Gm13121-201ENSMUST00000120637 632 ntBASIC5.37□□□□□ -1.55
Usp39Q3TIX9 Gm13000-201ENSMUST00000120937 496 ntBASIC5.37□□□□□ -1.55
Usp39Q3TIX9 Gm25291-201ENSMUST00000122795 144 ntBASIC5.37□□□□□ -1.55
Usp39Q3TIX9 1700048M11Rik-201ENSMUST00000132861 485 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Usp39Q3TIX9 Gm23233-201ENSMUST00000157301 137 ntBASIC5.37□□□□□ -1.55
Usp39Q3TIX9 Gm24216-201ENSMUST00000158259 117 ntBASIC5.37□□□□□ -1.55
Usp39Q3TIX9 Gm8220-202ENSMUST00000169601 525 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Usp39Q3TIX9 Rpl9-ps9-201ENSMUST00000173020 573 ntBASIC5.37□□□□□ -1.55
Usp39Q3TIX9 Gm24080-201ENSMUST00000175178 232 ntBASIC5.37□□□□□ -1.55
Usp39Q3TIX9 Gm24303-201ENSMUST00000178237 126 ntBASIC5.37□□□□□ -1.55
Usp39Q3TIX9 4930519F24Rik-201ENSMUST00000185764 579 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Usp39Q3TIX9 Gm38281-201ENSMUST00000192301 315 ntBASIC5.37□□□□□ -1.55
Usp39Q3TIX9 Gm37485-201ENSMUST00000192326 2953 ntBASIC5.37□□□□□ -1.55
Usp39Q3TIX9 5033404E19Rik-201ENSMUST00000192616 630 ntBASIC5.37□□□□□ -1.55
Usp39Q3TIX9 Gm8325-202ENSMUST00000193411 182 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Usp39Q3TIX9 A330074H02Rik-201ENSMUST00000194667 1039 ntBASIC5.37□□□□□ -1.55
Usp39Q3TIX9 Gm38334-201ENSMUST00000195060 313 ntBASIC5.37□□□□□ -1.55
Usp39Q3TIX9 Gm44319-201ENSMUST00000196974 93 ntBASIC5.37□□□□□ -1.55
Usp39Q3TIX9 Gng12-208ENSMUST00000204511 739 ntTSL 5 BASIC5.37□□□□□ -1.55
Usp39Q3TIX9 Gm43954-201ENSMUST00000204634 544 ntBASIC5.37□□□□□ -1.55
Usp39Q3TIX9 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC5.37□□□□□ -1.55
Usp39Q3TIX9 Gm45596-201ENSMUST00000209279 434 ntBASIC5.37□□□□□ -1.55
Usp39Q3TIX9 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC5.37□□□□□ -1.55
Usp39Q3TIX9 AC119892.1-201ENSMUST00000217997 384 ntTSL 3 BASIC5.37□□□□□ -1.55
Usp39Q3TIX9 AC124445.1-201ENSMUST00000218613 452 ntBASIC5.37□□□□□ -1.55
Usp39Q3TIX9 Pln-204ENSMUST00000219491 771 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
Usp39Q3TIX9 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Usp39Q3TIX9 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC5.37□□□□□ -1.55
Usp39Q3TIX9 Gm18247-201ENSMUST00000222937 601 ntBASIC5.37□□□□□ -1.55
Usp39Q3TIX9 Cox7b-201ENSMUST00000033582 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Usp39Q3TIX9 2310079G19Rik-201ENSMUST00000052337 881 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Usp39Q3TIX9 Olfr137-201ENSMUST00000057394 942 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Usp39Q3TIX9 mt-Tr-201ENSMUST00000082412 68 ntBASIC5.37□□□□□ -1.55
Usp39Q3TIX9 Snora30-201ENSMUST00000083325 130 ntBASIC5.37□□□□□ -1.55
Usp39Q3TIX9 Spint3-201ENSMUST00000099097 557 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Usp39Q3TIX9 Olfr1110-201ENSMUST00000099861 939 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Usp39Q3TIX9 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Usp39Q3TIX9 Gm42662-201ENSMUST00000202539 1431 ntBASIC5.37□□□□□ -1.55
Usp39Q3TIX9 Agbl2-204ENSMUST00000111481 3448 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
Usp39Q3TIX9 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
Usp39Q3TIX9 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Usp39Q3TIX9 Gm42721-201ENSMUST00000197165 1523 ntBASIC5.37□□□□□ -1.55
Usp39Q3TIX9 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
Usp39Q3TIX9 Spag5-201ENSMUST00000045026 3887 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Usp39Q3TIX9 AL670757.1-201ENSMUST00000223668 1959 ntBASIC5.36□□□□□ -1.55
Usp39Q3TIX9 AC162467.3-201ENSMUST00000219716 2172 ntBASIC5.36□□□□□ -1.55
Usp39Q3TIX9 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Usp39Q3TIX9 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Usp39Q3TIX9 Dsc1-201ENSMUST00000038710 3775 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Usp39Q3TIX9 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Usp39Q3TIX9 Olfr536-201ENSMUST00000064392 3853 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Usp39Q3TIX9 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Usp39Q3TIX9 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
Usp39Q3TIX9 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Usp39Q3TIX9 Gm37834-201ENSMUST00000194517 3035 ntBASIC5.36□□□□□ -1.55
Usp39Q3TIX9 Gm10563-201ENSMUST00000115821 237 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Usp39Q3TIX9 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC5.36□□□□□ -1.55
Usp39Q3TIX9 Gm6427-201ENSMUST00000118721 979 ntBASIC5.36□□□□□ -1.55
Usp39Q3TIX9 Gm15385-201ENSMUST00000118725 667 ntBASIC5.36□□□□□ -1.55
Usp39Q3TIX9 Gm2199-201ENSMUST00000119065 874 ntBASIC5.36□□□□□ -1.55
Usp39Q3TIX9 Gm12482-201ENSMUST00000120435 630 ntBASIC5.36□□□□□ -1.55
Usp39Q3TIX9 Gm12006-201ENSMUST00000120786 403 ntBASIC5.36□□□□□ -1.55
Usp39Q3TIX9 Gmfg-ps-201ENSMUST00000121071 427 ntBASIC5.36□□□□□ -1.55
Usp39Q3TIX9 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 120.2 ms