Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Mirt2-201ENSMUST00000175179 285 ntBASIC5.15□□□□□ -1.59
Col8a1Q00780 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Col8a1Q00780 Gm21698-201ENSMUST00000178487 666 ntTSL 5 BASIC5.15□□□□□ -1.59
Col8a1Q00780 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
Col8a1Q00780 Gm20619-205ENSMUST00000181633 581 ntTSL 2 BASIC5.15□□□□□ -1.59
Col8a1Q00780 Rps12-ps24-201ENSMUST00000182321 381 ntBASIC5.15□□□□□ -1.59
Col8a1Q00780 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC5.15□□□□□ -1.59
Col8a1Q00780 4930519F16Rik-206ENSMUST00000183292 800 ntBASIC5.15□□□□□ -1.59
Col8a1Q00780 Gm27970-201ENSMUST00000184854 407 ntBASIC5.15□□□□□ -1.59
Col8a1Q00780 Gm29563-201ENSMUST00000187249 496 ntBASIC5.15□□□□□ -1.59
Col8a1Q00780 Gm28502-201ENSMUST00000189781 476 ntTSL 2 BASIC5.15□□□□□ -1.59
Col8a1Q00780 1700031M16Rik-206ENSMUST00000191037 711 ntAPPRIS P5 TSL 3 BASIC5.15□□□□□ -1.59
Col8a1Q00780 Gm18867-201ENSMUST00000198022 1179 ntBASIC5.15□□□□□ -1.59
Col8a1Q00780 Gm44465-201ENSMUST00000199536 114 ntBASIC5.15□□□□□ -1.59
Col8a1Q00780 Gm2762-204ENSMUST00000201815 537 ntTSL 3 BASIC5.15□□□□□ -1.59
Col8a1Q00780 Olfr1353-202ENSMUST00000204849 1015 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Col8a1Q00780 Gm3189-201ENSMUST00000205595 832 ntBASIC5.15□□□□□ -1.59
Col8a1Q00780 Olfr1509-203ENSMUST00000206100 1161 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
Col8a1Q00780 Gm30717-201ENSMUST00000206549 494 ntTSL 5 BASIC5.15□□□□□ -1.59
Col8a1Q00780 Gm29920-201ENSMUST00000206876 754 ntBASIC5.15□□□□□ -1.59
Col8a1Q00780 AC153566.2-201ENSMUST00000213841 330 ntTSL 5 BASIC5.15□□□□□ -1.59
Col8a1Q00780 RMST_1.1-205ENSMUST00000218060 997 ntTSL 5 BASIC5.15□□□□□ -1.59
Col8a1Q00780 AC124826.1-201ENSMUST00000221651 325 ntBASIC5.15□□□□□ -1.59
Col8a1Q00780 Gm6068-201ENSMUST00000222270 387 ntBASIC5.15□□□□□ -1.59
Col8a1Q00780 AC124569.1-201ENSMUST00000225932 101 ntBASIC5.15□□□□□ -1.59
Col8a1Q00780 AC123061.2-201ENSMUST00000226234 802 ntBASIC5.15□□□□□ -1.59
Col8a1Q00780 AC122858.3-201ENSMUST00000226341 740 ntBASIC5.15□□□□□ -1.59
Col8a1Q00780 AC163664.2-201ENSMUST00000228894 459 ntBASIC5.15□□□□□ -1.59
Col8a1Q00780 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
Col8a1Q00780 Fam229b-201ENSMUST00000063204 745 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Col8a1Q00780 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Col8a1Q00780 Akr1c19-201ENSMUST00000081326 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Col8a1Q00780 Gm23407-201ENSMUST00000082538 91 ntBASIC5.15□□□□□ -1.59
Col8a1Q00780 Gm24490-201ENSMUST00000083803 98 ntBASIC5.15□□□□□ -1.59
Col8a1Q00780 Gm10540-201ENSMUST00000097581 276 ntBASIC5.15□□□□□ -1.59
Col8a1Q00780 Olfr1046-201ENSMUST00000099902 951 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Col8a1Q00780 Gm20644-201ENSMUST00000176721 2063 ntBASIC5.15□□□□□ -1.59
Col8a1Q00780 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC5.15□□□□□ -1.59
Col8a1Q00780 E430024I08Rik-208ENSMUST00000223312 1573 ntTSL 5 BASIC5.15□□□□□ -1.59
Col8a1Q00780 Zfp719-201ENSMUST00000058104 4494 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Col8a1Q00780 Tfb1m-201ENSMUST00000041003 1327 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Col8a1Q00780 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Col8a1Q00780 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
Col8a1Q00780 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Col8a1Q00780 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC5.15□□□□□ -1.59
Col8a1Q00780 Olfr976-202ENSMUST00000213171 2998 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
Col8a1Q00780 Gm42686-201ENSMUST00000199172 4108 ntBASIC5.15□□□□□ -1.59
Col8a1Q00780 Olfr745-202ENSMUST00000213127 1930 ntTSL 5 BASIC5.15□□□□□ -1.59
Col8a1Q00780 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Col8a1Q00780 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC5.15□□□□□ -1.59
Col8a1Q00780 Gm10825-201ENSMUST00000180537 4478 ntTSL 2 BASIC5.15□□□□□ -1.59
Col8a1Q00780 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Col8a1Q00780 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Col8a1Q00780 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Col8a1Q00780 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col8a1Q00780 Tsga10-207ENSMUST00000155852 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col8a1Q00780 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC5.14□□□□□ -1.59
Col8a1Q00780 Aadacl3-201ENSMUST00000105749 3153 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Col8a1Q00780 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col8a1Q00780 Olfr237-ps1-203ENSMUST00000216411 4115 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Col8a1Q00780 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Col8a1Q00780 Gm29275-202ENSMUST00000189475 1494 ntTSL 5 BASIC5.14□□□□□ -1.59
Col8a1Q00780 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Col8a1Q00780 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Col8a1Q00780 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col8a1Q00780 Gm5946-202ENSMUST00000182652 2724 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Col8a1Q00780 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC5.14□□□□□ -1.59
Col8a1Q00780 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col8a1Q00780 Gm43745-201ENSMUST00000198085 1883 ntBASIC5.14□□□□□ -1.59
Col8a1Q00780 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col8a1Q00780 Gm22272-201ENSMUST00000104039 134 ntBASIC5.14□□□□□ -1.59
Col8a1Q00780 Gm16400-201ENSMUST00000116523 1029 ntBASIC5.14□□□□□ -1.59
Col8a1Q00780 Gm13818-201ENSMUST00000119441 511 ntBASIC5.14□□□□□ -1.59
Col8a1Q00780 Mup-ps19-201ENSMUST00000120390 519 ntBASIC5.14□□□□□ -1.59
Col8a1Q00780 Gm7071-201ENSMUST00000120458 462 ntBASIC5.14□□□□□ -1.59
Col8a1Q00780 Dnajc19-ps-201ENSMUST00000120890 351 ntBASIC5.14□□□□□ -1.59
Col8a1Q00780 Gm15885-201ENSMUST00000122114 388 ntBASIC5.14□□□□□ -1.59
Col8a1Q00780 1700095A21Rik-201ENSMUST00000145269 1069 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Col8a1Q00780 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Col8a1Q00780 Gm22733-201ENSMUST00000158094 91 ntBASIC5.14□□□□□ -1.59
Col8a1Q00780 Gm24741-201ENSMUST00000158857 106 ntBASIC5.14□□□□□ -1.59
Col8a1Q00780 Gm6541-201ENSMUST00000165542 561 ntBASIC5.14□□□□□ -1.59
Col8a1Q00780 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Col8a1Q00780 Crxos-205ENSMUST00000171280 571 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Col8a1Q00780 Gm18522-201ENSMUST00000173947 650 ntBASIC5.14□□□□□ -1.59
Col8a1Q00780 Gm22569-201ENSMUST00000175545 124 ntBASIC5.14□□□□□ -1.59
Col8a1Q00780 Mir6963-201ENSMUST00000183535 71 ntBASIC5.14□□□□□ -1.59
Col8a1Q00780 Mir7093-201ENSMUST00000184195 101 ntBASIC5.14□□□□□ -1.59
Col8a1Q00780 Gm29552-201ENSMUST00000190548 660 ntBASIC5.14□□□□□ -1.59
Col8a1Q00780 Gm18444-201ENSMUST00000191239 629 ntBASIC5.14□□□□□ -1.59
Col8a1Q00780 Gm43160-201ENSMUST00000196453 421 ntBASIC5.14□□□□□ -1.59
Col8a1Q00780 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Col8a1Q00780 Gm5306-201ENSMUST00000203325 757 ntBASIC5.14□□□□□ -1.59
Col8a1Q00780 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC5.14□□□□□ -1.59
Col8a1Q00780 Gm45032-201ENSMUST00000205375 520 ntBASIC5.14□□□□□ -1.59
Col8a1Q00780 Gm17766-201ENSMUST00000209223 442 ntBASIC5.14□□□□□ -1.59
Col8a1Q00780 Gm6145-203ENSMUST00000210557 835 ntTSL 5 BASIC5.14□□□□□ -1.59
Col8a1Q00780 Olfr936-202ENSMUST00000216912 937 ntBASIC5.14□□□□□ -1.59
Col8a1Q00780 CT025680.1-201ENSMUST00000217375 375 ntBASIC5.14□□□□□ -1.59
Col8a1Q00780 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC5.14□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms