Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm3053-201ENSMUST00000161709 616 ntBASIC5.37□□□□□ -1.55
CiitaP79621 P2ry12-202ENSMUST00000170388 2101 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CiitaP79621 Gm6647-201ENSMUST00000170514 641 ntBASIC5.37□□□□□ -1.55
CiitaP79621 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC5.37□□□□□ -1.55
CiitaP79621 Gm21244-201ENSMUST00000178447 684 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CiitaP79621 4930509E16Rik-201ENSMUST00000181405 1191 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CiitaP79621 Gm26954-201ENSMUST00000182106 622 ntTSL 3 BASIC5.37□□□□□ -1.55
CiitaP79621 Gm26950-201ENSMUST00000182734 498 ntBASIC5.37□□□□□ -1.55
CiitaP79621 Gm29492-201ENSMUST00000187124 457 ntBASIC5.37□□□□□ -1.55
CiitaP79621 Gm18117-201ENSMUST00000187720 742 ntBASIC5.37□□□□□ -1.55
CiitaP79621 Gm29201-201ENSMUST00000189120 431 ntBASIC5.37□□□□□ -1.55
CiitaP79621 Gm43308-201ENSMUST00000197236 373 ntBASIC5.37□□□□□ -1.55
CiitaP79621 Gm42452-201ENSMUST00000199749 617 ntBASIC5.37□□□□□ -1.55
CiitaP79621 Gm44171-201ENSMUST00000203701 2109 ntBASIC5.37□□□□□ -1.55
CiitaP79621 Gm8264-201ENSMUST00000217801 465 ntBASIC5.37□□□□□ -1.55
CiitaP79621 AC153801.1-201ENSMUST00000217904 947 ntBASIC5.37□□□□□ -1.55
CiitaP79621 AC131720.3-201ENSMUST00000219113 275 ntBASIC5.37□□□□□ -1.55
CiitaP79621 Gm8158-201ENSMUST00000219220 465 ntBASIC5.37□□□□□ -1.55
CiitaP79621 Gm8112-201ENSMUST00000219637 465 ntBASIC5.37□□□□□ -1.55
CiitaP79621 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC5.37□□□□□ -1.55
CiitaP79621 CR974592.1-201ENSMUST00000220422 574 ntBASIC5.37□□□□□ -1.55
CiitaP79621 AC156798.1-201ENSMUST00000220508 224 ntBASIC5.37□□□□□ -1.55
CiitaP79621 AL645546.2-201ENSMUST00000224526 265 ntBASIC5.37□□□□□ -1.55
CiitaP79621 Gm25810-201ENSMUST00000082752 108 ntBASIC5.37□□□□□ -1.55
CiitaP79621 AC190403.1-201ENSMUST00000224515 1325 ntBASIC5.37□□□□□ -1.55
CiitaP79621 Gm12289-201ENSMUST00000130860 2235 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CiitaP79621 Jchain-201ENSMUST00000087033 1393 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CiitaP79621 Zfyve9-203ENSMUST00000106658 5987 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
CiitaP79621 Gm28832-201ENSMUST00000188603 1498 ntTSL 5 BASIC5.37□□□□□ -1.55
CiitaP79621 A530064N14Rik-201ENSMUST00000195338 1492 ntBASIC5.37□□□□□ -1.55
CiitaP79621 Olfr767-202ENSMUST00000213579 5493 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CiitaP79621 Slc5a12-202ENSMUST00000111026 3518 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CiitaP79621 Gm3978-201ENSMUST00000163406 2512 ntBASIC5.37□□□□□ -1.55
CiitaP79621 Epha7-203ENSMUST00000108191 6615 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CiitaP79621 Phf11d-201ENSMUST00000095157 2666 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
CiitaP79621 Olfr979-202ENSMUST00000215523 3397 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
CiitaP79621 Mtm1-213ENSMUST00000171933 3488 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CiitaP79621 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC5.36□□□□□ -1.55
CiitaP79621 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CiitaP79621 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CiitaP79621 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
CiitaP79621 Gm37226-201ENSMUST00000191644 3255 ntBASIC5.36□□□□□ -1.55
CiitaP79621 Olfr1279-203ENSMUST00000216697 3385 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
CiitaP79621 Olfr556-203ENSMUST00000217526 3741 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
CiitaP79621 Gm22020-201ENSMUST00000104358 136 ntBASIC5.36□□□□□ -1.55
CiitaP79621 Gm22899-201ENSMUST00000104540 131 ntBASIC5.36□□□□□ -1.55
CiitaP79621 Gm12988-201ENSMUST00000119054 478 ntBASIC5.36□□□□□ -1.55
CiitaP79621 Gm15034-201ENSMUST00000120043 349 ntBASIC5.36□□□□□ -1.55
CiitaP79621 Gm13149-201ENSMUST00000122071 339 ntBASIC5.36□□□□□ -1.55
CiitaP79621 Gm7840-201ENSMUST00000122086 533 ntBASIC5.36□□□□□ -1.55
CiitaP79621 Gm16259-201ENSMUST00000145241 553 ntBASIC5.36□□□□□ -1.55
CiitaP79621 Gm26312-201ENSMUST00000157769 165 ntBASIC5.36□□□□□ -1.55
CiitaP79621 Gm17669-201ENSMUST00000163749 465 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CiitaP79621 1700027H10Rik-201ENSMUST00000186818 584 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CiitaP79621 Gm28426-201ENSMUST00000187385 620 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CiitaP79621 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CiitaP79621 1700031M16Rik-204ENSMUST00000189724 824 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CiitaP79621 Gm29332-201ENSMUST00000190829 227 ntBASIC5.36□□□□□ -1.55
CiitaP79621 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CiitaP79621 Gm37073-201ENSMUST00000192469 1222 ntBASIC5.36□□□□□ -1.55
CiitaP79621 Gm36998-201ENSMUST00000193205 704 ntBASIC5.36□□□□□ -1.55
CiitaP79621 Gm18843-201ENSMUST00000194982 719 ntBASIC5.36□□□□□ -1.55
CiitaP79621 Ube2l3-ps1-201ENSMUST00000199777 436 ntBASIC5.36□□□□□ -1.55
CiitaP79621 Gm44079-201ENSMUST00000204889 529 ntTSL 5 BASIC5.36□□□□□ -1.55
CiitaP79621 AC165092.2-201ENSMUST00000224681 368 ntBASIC5.36□□□□□ -1.55
CiitaP79621 n-R5s205-201ENSMUST00000083149 125 ntBASIC5.36□□□□□ -1.55
CiitaP79621 Gm15394-201ENSMUST00000119656 1308 ntBASIC5.36□□□□□ -1.55
CiitaP79621 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CiitaP79621 AC159326.1-201ENSMUST00000219989 1302 ntBASIC5.36□□□□□ -1.55
CiitaP79621 Il13ra2-202ENSMUST00000112827 1536 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CiitaP79621 Gm43843-201ENSMUST00000202396 1587 ntBASIC5.36□□□□□ -1.55
CiitaP79621 Cyp2c50-201ENSMUST00000068094 1643 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CiitaP79621 Ankrd12-201ENSMUST00000038116 8991 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
CiitaP79621 Gm19113-201ENSMUST00000217552 1828 ntBASIC5.36□□□□□ -1.55
CiitaP79621 Gm45149-201ENSMUST00000206459 2172 ntBASIC5.36□□□□□ -1.55
CiitaP79621 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CiitaP79621 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CiitaP79621 Olfr1057-202ENSMUST00000217435 3249 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
CiitaP79621 Gm42869-201ENSMUST00000199953 2121 ntBASIC5.35□□□□□ -1.55
CiitaP79621 AC127371.2-201ENSMUST00000228108 1933 ntBASIC5.35□□□□□ -1.55
CiitaP79621 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CiitaP79621 Gm15560-201ENSMUST00000117107 643 ntBASIC5.35□□□□□ -1.55
CiitaP79621 Gm14790-201ENSMUST00000117760 1293 ntBASIC5.35□□□□□ -1.55
CiitaP79621 Gm12039-201ENSMUST00000118219 180 ntBASIC5.35□□□□□ -1.55
CiitaP79621 Gm16179-201ENSMUST00000120685 373 ntBASIC5.35□□□□□ -1.55
CiitaP79621 Gm13867-201ENSMUST00000120844 395 ntBASIC5.35□□□□□ -1.55
CiitaP79621 Gm14776-201ENSMUST00000121029 887 ntBASIC5.35□□□□□ -1.55
CiitaP79621 Gm12041-201ENSMUST00000121606 602 ntBASIC5.35□□□□□ -1.55
CiitaP79621 Amy2a1-201ENSMUST00000132353 890 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
CiitaP79621 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC5.35□□□□□ -1.55
CiitaP79621 Gm25655-201ENSMUST00000158465 290 ntBASIC5.35□□□□□ -1.55
CiitaP79621 4831440E17Rik-201ENSMUST00000181942 1028 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CiitaP79621 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC5.35□□□□□ -1.55
CiitaP79621 Ly6e-215ENSMUST00000191436 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CiitaP79621 Tas2r145-ps3-201ENSMUST00000204526 992 ntBASIC5.35□□□□□ -1.55
CiitaP79621 CU024892.1-201ENSMUST00000224869 515 ntBASIC5.35□□□□□ -1.55
CiitaP79621 Gm22826-201ENSMUST00000083774 165 ntBASIC5.35□□□□□ -1.55
CiitaP79621 Vmn1r55-201ENSMUST00000098844 1284 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CiitaP79621 Olfr1111-201ENSMUST00000099860 940 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CiitaP79621 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC5.35□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms