Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC5.71□□□□□ -1.5
Shmt1P50431 Gm8358-201ENSMUST00000167222 555 ntBASIC5.71□□□□□ -1.5
Shmt1P50431 Gm8256-201ENSMUST00000169178 453 ntBASIC5.71□□□□□ -1.5
Shmt1P50431 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC5.71□□□□□ -1.5
Shmt1P50431 Mir5112-201ENSMUST00000174897 60 ntBASIC5.71□□□□□ -1.5
Shmt1P50431 Gm18417-201ENSMUST00000176564 648 ntBASIC5.71□□□□□ -1.5
Shmt1P50431 Lockd-204ENSMUST00000184991 243 ntTSL 5 BASIC5.71□□□□□ -1.5
Shmt1P50431 Gm20897-201ENSMUST00000185240 923 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Shmt1P50431 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Shmt1P50431 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Shmt1P50431 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Shmt1P50431 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Shmt1P50431 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Shmt1P50431 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Shmt1P50431 Gm29299-201ENSMUST00000185609 923 ntBASIC5.71□□□□□ -1.5
Shmt1P50431 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Shmt1P50431 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Shmt1P50431 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Shmt1P50431 Gm18727-201ENSMUST00000185981 553 ntBASIC5.71□□□□□ -1.5
Shmt1P50431 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Shmt1P50431 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Shmt1P50431 Gm20906-201ENSMUST00000186493 923 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Shmt1P50431 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Shmt1P50431 Gm20824-201ENSMUST00000186739 919 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Shmt1P50431 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Shmt1P50431 Gm20855-202ENSMUST00000186996 924 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Shmt1P50431 Gm20911-201ENSMUST00000187135 924 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Shmt1P50431 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Shmt1P50431 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Shmt1P50431 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Shmt1P50431 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Shmt1P50431 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Shmt1P50431 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Shmt1P50431 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Shmt1P50431 Gm29600-201ENSMUST00000188687 377 ntBASIC5.71□□□□□ -1.5
Shmt1P50431 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Shmt1P50431 Gm20820-201ENSMUST00000188754 921 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Shmt1P50431 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Shmt1P50431 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Shmt1P50431 Gm29133-201ENSMUST00000189155 885 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Shmt1P50431 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC5.71□□□□□ -1.5
Shmt1P50431 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Shmt1P50431 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Shmt1P50431 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Shmt1P50431 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Shmt1P50431 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Shmt1P50431 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Shmt1P50431 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Shmt1P50431 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Shmt1P50431 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Shmt1P50431 Gm28919-201ENSMUST00000190026 920 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Shmt1P50431 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Shmt1P50431 Gm29573-201ENSMUST00000190291 919 ntBASIC5.71□□□□□ -1.5
Shmt1P50431 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Shmt1P50431 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Shmt1P50431 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Shmt1P50431 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Shmt1P50431 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Shmt1P50431 Gm21865-202ENSMUST00000191443 923 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Shmt1P50431 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Shmt1P50431 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Shmt1P50431 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Shmt1P50431 Gm30737-201ENSMUST00000192683 923 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Shmt1P50431 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Shmt1P50431 Gm35134-201ENSMUST00000194086 923 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Shmt1P50431 Gm17992-201ENSMUST00000207346 1072 ntBASIC5.71□□□□□ -1.5
Shmt1P50431 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Shmt1P50431 Gm6850-201ENSMUST00000210031 530 ntBASIC5.71□□□□□ -1.5
Shmt1P50431 AC153541.1-201ENSMUST00000213786 294 ntBASIC5.71□□□□□ -1.5
Shmt1P50431 AC151843.1-201ENSMUST00000215960 691 ntBASIC5.71□□□□□ -1.5
Shmt1P50431 AC134537.2-201ENSMUST00000217770 575 ntBASIC5.71□□□□□ -1.5
Shmt1P50431 AC159297.1-201ENSMUST00000218689 290 ntBASIC5.71□□□□□ -1.5
Shmt1P50431 AC155808.1-201ENSMUST00000219288 409 ntBASIC5.71□□□□□ -1.5
Shmt1P50431 Gm40692-201ENSMUST00000220411 491 ntBASIC5.71□□□□□ -1.5
Shmt1P50431 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC5.71□□□□□ -1.5
Shmt1P50431 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC5.71□□□□□ -1.5
Shmt1P50431 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Shmt1P50431 Vmn1r89-201ENSMUST00000053008 951 ntAPPRIS P2 BASIC5.71□□□□□ -1.5
Shmt1P50431 Orm3-201ENSMUST00000006687 773 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Shmt1P50431 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC5.71□□□□□ -1.5
Shmt1P50431 Olfr833-ps1-201ENSMUST00000086493 913 ntBASIC5.71□□□□□ -1.5
Shmt1P50431 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Shmt1P50431 Gm9386-201ENSMUST00000095195 381 ntBASIC5.71□□□□□ -1.5
Shmt1P50431 Olfr739-202ENSMUST00000216949 3581 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Shmt1P50431 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Shmt1P50431 Fat2-201ENSMUST00000068853 14528 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Shmt1P50431 Gm44827-201ENSMUST00000207963 2229 ntTSL 5 BASIC5.71□□□□□ -1.5
Shmt1P50431 Gm37049-201ENSMUST00000194356 1983 ntBASIC5.71□□□□□ -1.5
Shmt1P50431 Dnah3-204ENSMUST00000209154 12265 ntAPPRIS P5 TSL 5 BASIC5.71□□□□□ -1.5
Shmt1P50431 AC164092.3-201ENSMUST00000216970 1323 ntBASIC5.71□□□□□ -1.5
Shmt1P50431 AC162908.1-201ENSMUST00000219164 4563 ntBASIC5.7□□□□□ -1.5
Shmt1P50431 Olfr829-202ENSMUST00000212229 2590 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Shmt1P50431 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Shmt1P50431 Xkrx-201ENSMUST00000033611 2876 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Shmt1P50431 Olfr644-202ENSMUST00000213184 3572 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Shmt1P50431 Gm37470-201ENSMUST00000193378 2798 ntBASIC5.7□□□□□ -1.5
Shmt1P50431 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Shmt1P50431 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Shmt1P50431 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Shmt1P50431 Gm19131-202ENSMUST00000203464 3208 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 88 ms