Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm6337-202ENSMUST00000170613 997 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
Rfx1P48377 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC6.97□□□□□ -1.29
Rfx1P48377 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Rfx1P48377 Gm16430-202ENSMUST00000178145 703 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Rfx1P48377 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Rfx1P48377 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Rfx1P48377 Gm16405-202ENSMUST00000180150 703 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Rfx1P48377 Gm26557-201ENSMUST00000180756 493 ntBASIC6.97□□□□□ -1.29
Rfx1P48377 Gm27004-201ENSMUST00000183300 727 ntBASIC6.97□□□□□ -1.29
Rfx1P48377 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC6.97□□□□□ -1.29
Rfx1P48377 Mir6341-201ENSMUST00000183490 121 ntBASIC6.97□□□□□ -1.29
Rfx1P48377 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC6.97□□□□□ -1.29
Rfx1P48377 Gm29124-201ENSMUST00000186576 452 ntBASIC6.97□□□□□ -1.29
Rfx1P48377 Ly6e-206ENSMUST00000187284 654 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Rfx1P48377 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Rfx1P48377 4930434B07Rik-201ENSMUST00000190254 1020 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Rfx1P48377 Gm43396-201ENSMUST00000197506 706 ntBASIC6.97□□□□□ -1.29
Rfx1P48377 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Rfx1P48377 AC151967.1-201ENSMUST00000198146 76 ntBASIC6.97□□□□□ -1.29
Rfx1P48377 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC6.97□□□□□ -1.29
Rfx1P48377 Gm45722-201ENSMUST00000213075 466 ntBASIC6.97□□□□□ -1.29
Rfx1P48377 Gm19074-201ENSMUST00000218915 1429 ntBASIC6.97□□□□□ -1.29
Rfx1P48377 AC102312.1-203ENSMUST00000219530 763 ntTSL 2 BASIC6.97□□□□□ -1.29
Rfx1P48377 AC121947.1-201ENSMUST00000221755 1145 ntBASIC6.97□□□□□ -1.29
Rfx1P48377 Gm7240-202ENSMUST00000221961 353 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Rfx1P48377 AC154767.2-201ENSMUST00000224584 414 ntBASIC6.97□□□□□ -1.29
Rfx1P48377 AL590614.1-201ENSMUST00000226037 268 ntBASIC6.97□□□□□ -1.29
Rfx1P48377 AC112142.1-206ENSMUST00000228136 982 ntBASIC6.97□□□□□ -1.29
Rfx1P48377 A630073D07Rik-201ENSMUST00000091791 484 ntAPPRIS P1 TSL 3 BASIC6.97□□□□□ -1.29
Rfx1P48377 Rps19-ps4-201ENSMUST00000091925 438 ntBASIC6.97□□□□□ -1.29
Rfx1P48377 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Rfx1P48377 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Rfx1P48377 Gm43886-201ENSMUST00000205039 2386 ntBASIC6.97□□□□□ -1.29
Rfx1P48377 AC166358.5-201ENSMUST00000220706 1302 ntBASIC6.97□□□□□ -1.29
Rfx1P48377 Son-205ENSMUST00000122302 2449 ntTSL 5 BASIC6.97□□□□□ -1.29
Rfx1P48377 Gm28320-201ENSMUST00000187777 2273 ntBASIC6.97□□□□□ -1.29
Rfx1P48377 Olfr1302-202ENSMUST00000214708 2461 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.29
Rfx1P48377 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Rfx1P48377 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC6.96□□□□□ -1.29
Rfx1P48377 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
Rfx1P48377 Gm42873-201ENSMUST00000196110 1726 ntBASIC6.96□□□□□ -1.29
Rfx1P48377 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Rfx1P48377 AC154511.1-201ENSMUST00000222578 1587 ntBASIC6.96□□□□□ -1.29
Rfx1P48377 Gm8267-203ENSMUST00000226900 1592 ntAPPRIS ALT2 BASIC6.96□□□□□ -1.29
Rfx1P48377 Vmn1r171-201ENSMUST00000078458 1581 ntAPPRIS P2 BASIC6.96□□□□□ -1.29
Rfx1P48377 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Rfx1P48377 Olfr1131-202ENSMUST00000213302 1779 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Rfx1P48377 Igkv5-37-201ENSMUST00000103372 359 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Rfx1P48377 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Rfx1P48377 Mir208b-201ENSMUST00000104735 77 ntBASIC6.96□□□□□ -1.3
Rfx1P48377 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Rfx1P48377 Gm11462-201ENSMUST00000117749 562 ntBASIC6.96□□□□□ -1.3
Rfx1P48377 Gm11256-201ENSMUST00000118109 829 ntBASIC6.96□□□□□ -1.3
Rfx1P48377 Gm15400-201ENSMUST00000118944 601 ntBASIC6.96□□□□□ -1.3
Rfx1P48377 Gm16074-201ENSMUST00000119524 444 ntBASIC6.96□□□□□ -1.3
Rfx1P48377 Gm14876-201ENSMUST00000120795 327 ntBASIC6.96□□□□□ -1.3
Rfx1P48377 Gm25782-201ENSMUST00000122526 289 ntBASIC6.96□□□□□ -1.3
Rfx1P48377 Gm23883-201ENSMUST00000122686 290 ntBASIC6.96□□□□□ -1.3
Rfx1P48377 Gm7855-201ENSMUST00000137737 687 ntBASIC6.96□□□□□ -1.3
Rfx1P48377 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC6.96□□□□□ -1.3
Rfx1P48377 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC6.96□□□□□ -1.3
Rfx1P48377 Gm22080-201ENSMUST00000157591 106 ntBASIC6.96□□□□□ -1.3
Rfx1P48377 Gm23279-201ENSMUST00000157912 97 ntBASIC6.96□□□□□ -1.3
Rfx1P48377 Gm25660-201ENSMUST00000158470 104 ntBASIC6.96□□□□□ -1.3
Rfx1P48377 Gm20612-201ENSMUST00000176318 236 ntBASIC6.96□□□□□ -1.3
Rfx1P48377 Gm6223-201ENSMUST00000178436 871 ntBASIC6.96□□□□□ -1.3
Rfx1P48377 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC6.96□□□□□ -1.3
Rfx1P48377 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC6.96□□□□□ -1.3
Rfx1P48377 Gm27957-201ENSMUST00000184054 127 ntBASIC6.96□□□□□ -1.3
Rfx1P48377 Mrgpra18-ps-201ENSMUST00000188059 907 ntBASIC6.96□□□□□ -1.3
Rfx1P48377 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC6.96□□□□□ -1.3
Rfx1P48377 Gm36382-201ENSMUST00000198892 541 ntBASIC6.96□□□□□ -1.3
Rfx1P48377 Oaz3-204ENSMUST00000199678 935 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
Rfx1P48377 BC049739-201ENSMUST00000202626 660 ntBASIC6.96□□□□□ -1.3
Rfx1P48377 Gm18672-201ENSMUST00000208035 270 ntBASIC6.96□□□□□ -1.3
Rfx1P48377 Nxpe1-ps-203ENSMUST00000210879 822 ntTSL 5 BASIC6.96□□□□□ -1.3
Rfx1P48377 Gm45530-201ENSMUST00000211658 225 ntBASIC6.96□□□□□ -1.3
Rfx1P48377 4930503L19Rik-203ENSMUST00000212074 1210 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Rfx1P48377 AC134528.1-201ENSMUST00000219156 387 ntTSL 2 BASIC6.96□□□□□ -1.3
Rfx1P48377 Gm46994-201ENSMUST00000221523 219 ntBASIC6.96□□□□□ -1.3
Rfx1P48377 AC159619.2-201ENSMUST00000222924 401 ntBASIC6.96□□□□□ -1.3
Rfx1P48377 Icos-201ENSMUST00000027162 810 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
Rfx1P48377 Vmn1r70-201ENSMUST00000055847 897 ntAPPRIS P2 BASIC6.96□□□□□ -1.3
Rfx1P48377 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Rfx1P48377 Gm22810-201ENSMUST00000082741 158 ntBASIC6.96□□□□□ -1.3
Rfx1P48377 Mir7b-201ENSMUST00000083557 111 ntBASIC6.96□□□□□ -1.3
Rfx1P48377 Olfr1049-201ENSMUST00000099899 953 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Rfx1P48377 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Rfx1P48377 Gm43900-201ENSMUST00000204868 2669 ntBASIC6.96□□□□□ -1.3
Rfx1P48377 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Rfx1P48377 Fbxw25-201ENSMUST00000163839 1490 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Rfx1P48377 Evi2-202ENSMUST00000170422 3944 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Rfx1P48377 Gm1966-201ENSMUST00000184540 7293 ntBASIC6.96□□□□□ -1.3
Rfx1P48377 Gm38299-201ENSMUST00000193214 3789 ntBASIC6.96□□□□□ -1.3
Rfx1P48377 Slc22a28-201ENSMUST00000065651 2004 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Rfx1P48377 Rsrc2-219ENSMUST00000182955 1685 ntTSL 5 BASIC6.96□□□□□ -1.3
Rfx1P48377 AC120375.2-201ENSMUST00000226532 1853 ntBASIC6.96□□□□□ -1.3
Rfx1P48377 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC6.96□□□□□ -1.3
Rfx1P48377 AC153494.1-201ENSMUST00000218664 3041 ntBASIC6.95□□□□□ -1.3
Rfx1P48377 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 116.2 ms