Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Mir3110-201ENSMUST00000175053 80 ntBASIC4.32□□□□□ -1.72
Tnfsf4P43488 Gm20663-201ENSMUST00000176647 474 ntTSL 3 BASIC4.32□□□□□ -1.72
Tnfsf4P43488 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Tnfsf4P43488 Gm29332-201ENSMUST00000190829 227 ntBASIC4.32□□□□□ -1.72
Tnfsf4P43488 Gm3338-201ENSMUST00000220982 269 ntBASIC4.32□□□□□ -1.72
Tnfsf4P43488 AC154657.1-201ENSMUST00000226394 775 ntBASIC4.32□□□□□ -1.72
Tnfsf4P43488 AC126253.2-201ENSMUST00000226518 205 ntBASIC4.32□□□□□ -1.72
Tnfsf4P43488 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC4.32□□□□□ -1.72
Tnfsf4P43488 Gm5458-201ENSMUST00000096121 997 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
Tnfsf4P43488 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Tnfsf4P43488 Olfr393-202ENSMUST00000213365 4048 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Tnfsf4P43488 Olfr980-202ENSMUST00000216463 3050 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Tnfsf4P43488 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Tnfsf4P43488 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Tnfsf4P43488 Slfn8-202ENSMUST00000092838 3529 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Tnfsf4P43488 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Tnfsf4P43488 Gm43526-201ENSMUST00000196666 1565 ntBASIC4.31□□□□□ -1.72
Tnfsf4P43488 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC4.31□□□□□ -1.72
Tnfsf4P43488 Olfr672-202ENSMUST00000213942 1490 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
Tnfsf4P43488 Gm21037-201ENSMUST00000209086 2608 ntBASIC4.31□□□□□ -1.72
Tnfsf4P43488 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC4.31□□□□□ -1.72
Tnfsf4P43488 Olfr32-204ENSMUST00000215153 3117 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
Tnfsf4P43488 AC156025.1-201ENSMUST00000223597 3551 ntBASIC4.31□□□□□ -1.72
Tnfsf4P43488 AC112142.1-203ENSMUST00000228670 2472 ntBASIC4.31□□□□□ -1.72
Tnfsf4P43488 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Tnfsf4P43488 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Tnfsf4P43488 Dnah7c-204ENSMUST00000189749 12207 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Tnfsf4P43488 Defa-ps15-201ENSMUST00000118178 477 ntBASIC4.31□□□□□ -1.72
Tnfsf4P43488 Ube2v2-204ENSMUST00000118236 893 ntTSL 5 BASIC4.31□□□□□ -1.72
Tnfsf4P43488 Gm12186-201ENSMUST00000119050 945 ntBASIC4.31□□□□□ -1.72
Tnfsf4P43488 Gm15971-201ENSMUST00000119372 211 ntBASIC4.31□□□□□ -1.72
Tnfsf4P43488 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC4.31□□□□□ -1.72
Tnfsf4P43488 Gm24251-201ENSMUST00000157324 114 ntBASIC4.31□□□□□ -1.72
Tnfsf4P43488 Gm23902-201ENSMUST00000157571 134 ntBASIC4.31□□□□□ -1.72
Tnfsf4P43488 Gm25906-201ENSMUST00000158489 126 ntBASIC4.31□□□□□ -1.72
Tnfsf4P43488 Gm21850-201ENSMUST00000179792 359 ntBASIC4.31□□□□□ -1.72
Tnfsf4P43488 Gm27202-201ENSMUST00000183838 512 ntTSL 5 BASIC4.31□□□□□ -1.72
Tnfsf4P43488 Gm37741-201ENSMUST00000191768 1256 ntBASIC4.31□□□□□ -1.72
Tnfsf4P43488 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC4.31□□□□□ -1.72
Tnfsf4P43488 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC4.31□□□□□ -1.72
Tnfsf4P43488 Gm45857-201ENSMUST00000212207 356 ntBASIC4.31□□□□□ -1.72
Tnfsf4P43488 Olfr967-202ENSMUST00000213358 1210 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Tnfsf4P43488 AC153955.3-201ENSMUST00000216787 646 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Tnfsf4P43488 AC152062.1-201ENSMUST00000218129 386 ntBASIC4.31□□□□□ -1.72
Tnfsf4P43488 AC154239.2-201ENSMUST00000227859 233 ntBASIC4.31□□□□□ -1.72
Tnfsf4P43488 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Tnfsf4P43488 Olfr584-202ENSMUST00000214215 3152 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Tnfsf4P43488 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
Tnfsf4P43488 Ptprc-203ENSMUST00000182283 4702 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
Tnfsf4P43488 Vmn1r66-201ENSMUST00000060374 1524 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Tnfsf4P43488 Olfr1131-203ENSMUST00000216756 1459 ntTSL 3 BASIC4.3□□□□□ -1.72
Tnfsf4P43488 Gm37345-201ENSMUST00000193062 3138 ntBASIC4.3□□□□□ -1.72
Tnfsf4P43488 Cep55-202ENSMUST00000116506 1440 ntAPPRIS P3 TSL 5 BASIC4.3□□□□□ -1.72
Tnfsf4P43488 AC154313.1-201ENSMUST00000217755 3841 ntBASIC4.3□□□□□ -1.72
Tnfsf4P43488 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC4.3□□□□□ -1.72
Tnfsf4P43488 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC4.3□□□□□ -1.72
Tnfsf4P43488 1700017N19Rik-204ENSMUST00000188736 1709 ntTSL 5 BASIC4.3□□□□□ -1.72
Tnfsf4P43488 AC153959.1-201ENSMUST00000213617 1694 ntBASIC4.3□□□□□ -1.72
Tnfsf4P43488 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Tnfsf4P43488 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Tnfsf4P43488 Xlr5d-ps-201ENSMUST00000117501 782 ntBASIC4.3□□□□□ -1.72
Tnfsf4P43488 Gm15058-201ENSMUST00000117689 458 ntBASIC4.3□□□□□ -1.72
Tnfsf4P43488 Gm7840-201ENSMUST00000122086 533 ntBASIC4.3□□□□□ -1.72
Tnfsf4P43488 Gm13662-201ENSMUST00000157059 712 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Tnfsf4P43488 Gm9027-201ENSMUST00000165914 661 ntBASIC4.3□□□□□ -1.72
Tnfsf4P43488 Malat1-203ENSMUST00000173499 485 ntTSL 3 BASIC4.3□□□□□ -1.72
Tnfsf4P43488 Mir7022-201ENSMUST00000183749 61 ntBASIC4.3□□□□□ -1.72
Tnfsf4P43488 Gm18352-201ENSMUST00000189113 902 ntBASIC4.3□□□□□ -1.72
Tnfsf4P43488 Gm36991-201ENSMUST00000191800 648 ntBASIC4.3□□□□□ -1.72
Tnfsf4P43488 Gm36986-201ENSMUST00000195320 353 ntBASIC4.3□□□□□ -1.72
Tnfsf4P43488 Gm43018-201ENSMUST00000198075 1275 ntBASIC4.3□□□□□ -1.72
Tnfsf4P43488 Gm44738-201ENSMUST00000206393 371 ntTSL 2 BASIC4.3□□□□□ -1.72
Tnfsf4P43488 Gm45392-201ENSMUST00000210441 214 ntBASIC4.3□□□□□ -1.72
Tnfsf4P43488 Gm30676-201ENSMUST00000214000 1165 ntTSL 5 BASIC4.3□□□□□ -1.72
Tnfsf4P43488 AC156639.1-201ENSMUST00000216503 660 ntTSL 3 BASIC4.3□□□□□ -1.72
Tnfsf4P43488 Gm6049-201ENSMUST00000222369 458 ntBASIC4.3□□□□□ -1.72
Tnfsf4P43488 AC125543.1-201ENSMUST00000222778 101 ntBASIC4.3□□□□□ -1.72
Tnfsf4P43488 Olfr904-201ENSMUST00000058153 933 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Tnfsf4P43488 Gm6195-201ENSMUST00000063059 357 ntBASIC4.3□□□□□ -1.72
Tnfsf4P43488 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Tnfsf4P43488 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC4.3□□□□□ -1.72
Tnfsf4P43488 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC4.3□□□□□ -1.72
Tnfsf4P43488 Zfp808-201ENSMUST00000099449 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Tnfsf4P43488 Slc22a30-201ENSMUST00000064507 1888 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Tnfsf4P43488 Gm37217-201ENSMUST00000194017 3521 ntBASIC4.3□□□□□ -1.72
Tnfsf4P43488 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
Tnfsf4P43488 Olfr364-ps1-201ENSMUST00000104995 1766 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Tnfsf4P43488 Gm14014-201ENSMUST00000156718 2717 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Tnfsf4P43488 Cdh19-201ENSMUST00000094626 3914 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Tnfsf4P43488 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Tnfsf4P43488 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Tnfsf4P43488 Gm42680-201ENSMUST00000196238 2500 ntBASIC4.29□□□□□ -1.72
Tnfsf4P43488 Olfr1353-203ENSMUST00000205193 1924 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Tnfsf4P43488 Olfr657-202ENSMUST00000213297 1948 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Tnfsf4P43488 Gm15394-201ENSMUST00000119656 1308 ntBASIC4.29□□□□□ -1.72
Tnfsf4P43488 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Tnfsf4P43488 Scel-201ENSMUST00000095576 2424 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
Tnfsf4P43488 Gm13451-201ENSMUST00000117649 592 ntBASIC4.29□□□□□ -1.72
Tnfsf4P43488 Gm14303-201ENSMUST00000121320 171 ntBASIC4.29□□□□□ -1.72
Tnfsf4P43488 Gm7879-201ENSMUST00000122204 774 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms