Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 4930503L19Rik-202ENSMUST00000211817 913 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Cdx2P43241 Gm18442-201ENSMUST00000220925 639 ntBASIC4.5□□□□□ -1.69
Cdx2P43241 Gm26861-206ENSMUST00000222633 1039 ntTSL 5 BASIC4.5□□□□□ -1.69
Cdx2P43241 AC154241.1-201ENSMUST00000223952 356 ntBASIC4.5□□□□□ -1.69
Cdx2P43241 AC114573.1-201ENSMUST00000224120 1210 ntBASIC4.5□□□□□ -1.69
Cdx2P43241 AC183096.1-201ENSMUST00000226392 130 ntBASIC4.5□□□□□ -1.69
Cdx2P43241 Rps26-ps1-201ENSMUST00000077208 449 ntBASIC4.5□□□□□ -1.69
Cdx2P43241 Spink12-201ENSMUST00000081271 1007 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Cdx2P43241 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Cdx2P43241 Dsc1-201ENSMUST00000038710 3775 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
Cdx2P43241 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Cdx2P43241 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC4.5□□□□□ -1.69
Cdx2P43241 Gm42843-201ENSMUST00000196328 3616 ntBASIC4.5□□□□□ -1.69
Cdx2P43241 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Cdx2P43241 BC003331-204ENSMUST00000097547 2851 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
Cdx2P43241 Gm37226-201ENSMUST00000191644 3255 ntBASIC4.5□□□□□ -1.69
Cdx2P43241 Olfr273-202ENSMUST00000107670 4796 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Cdx2P43241 Olfr1290-204ENSMUST00000217611 2729 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
Cdx2P43241 Olfr578-202ENSMUST00000215606 3665 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Cdx2P43241 Serpinb5-201ENSMUST00000086701 2572 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Cdx2P43241 AC187103.2-201ENSMUST00000223605 1617 ntBASIC4.5□□□□□ -1.69
Cdx2P43241 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Cdx2P43241 Olfr1270-205ENSMUST00000216354 4836 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Cdx2P43241 Lrriq3-203ENSMUST00000194376 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
Cdx2P43241 Gm44567-201ENSMUST00000205645 2631 ntBASIC4.49□□□□□ -1.69
Cdx2P43241 Spata1-206ENSMUST00000197980 1807 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Cdx2P43241 Olfr495-202ENSMUST00000215215 2460 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Cdx2P43241 Gm16185-201ENSMUST00000125071 3207 ntTSL 5 BASIC4.49□□□□□ -1.69
Cdx2P43241 Btbd35f21-201ENSMUST00000105017 1943 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Cdx2P43241 Btbd35f2-201ENSMUST00000179991 1949 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Cdx2P43241 Btbd35f16-201ENSMUST00000185755 1949 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Cdx2P43241 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC4.49□□□□□ -1.69
Cdx2P43241 Gm14305-201ENSMUST00000108980 1167 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Cdx2P43241 Slamf7-201ENSMUST00000111276 1082 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
Cdx2P43241 Gm13815-201ENSMUST00000119963 412 ntBASIC4.49□□□□□ -1.69
Cdx2P43241 Olfr660-ps1-201ENSMUST00000121526 375 ntBASIC4.49□□□□□ -1.69
Cdx2P43241 Gm23789-201ENSMUST00000122536 301 ntBASIC4.49□□□□□ -1.69
Cdx2P43241 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC4.49□□□□□ -1.69
Cdx2P43241 Gm24689-201ENSMUST00000157760 104 ntBASIC4.49□□□□□ -1.69
Cdx2P43241 Gm1992-201ENSMUST00000161581 250 ntTSL 3 BASIC4.49□□□□□ -1.69
Cdx2P43241 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC4.49□□□□□ -1.69
Cdx2P43241 Gm27883-201ENSMUST00000183941 102 ntBASIC4.49□□□□□ -1.69
Cdx2P43241 Gm27242-201ENSMUST00000184211 1151 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Cdx2P43241 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC4.49□□□□□ -1.69
Cdx2P43241 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC4.49□□□□□ -1.69
Cdx2P43241 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Cdx2P43241 Gm29664-201ENSMUST00000191125 463 ntBASIC4.49□□□□□ -1.69
Cdx2P43241 Gm36983-201ENSMUST00000192280 1102 ntBASIC4.49□□□□□ -1.69
Cdx2P43241 2610012C04Rik-201ENSMUST00000193434 1023 ntBASIC4.49□□□□□ -1.69
Cdx2P43241 Mirlet7e-201ENSMUST00000196737 93 ntBASIC4.49□□□□□ -1.69
Cdx2P43241 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
Cdx2P43241 Csn2-208ENSMUST00000198057 827 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
Cdx2P43241 Gm43596-201ENSMUST00000202818 884 ntBASIC4.49□□□□□ -1.69
Cdx2P43241 Gm45499-201ENSMUST00000211656 280 ntBASIC4.49□□□□□ -1.69
Cdx2P43241 Gm3338-201ENSMUST00000220982 269 ntBASIC4.49□□□□□ -1.69
Cdx2P43241 Gm8672-201ENSMUST00000221200 332 ntBASIC4.49□□□□□ -1.69
Cdx2P43241 Olfr481-202ENSMUST00000213601 5247 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Cdx2P43241 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Cdx2P43241 Vmn1r87-203ENSMUST00000227443 5319 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Cdx2P43241 Gm9700-201ENSMUST00000193786 1617 ntBASIC4.49□□□□□ -1.69
Cdx2P43241 Gm37250-201ENSMUST00000194919 2388 ntBASIC4.49□□□□□ -1.69
Cdx2P43241 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC4.49□□□□□ -1.69
Cdx2P43241 Vmn1r20-202ENSMUST00000227909 3709 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Cdx2P43241 Gm42600-201ENSMUST00000202081 3588 ntBASIC4.49□□□□□ -1.69
Cdx2P43241 Ankrd12-201ENSMUST00000038116 8991 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Cdx2P43241 Zfp119b-202ENSMUST00000189452 2078 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Cdx2P43241 Gm19136-201ENSMUST00000190706 2067 ntBASIC4.49□□□□□ -1.69
Cdx2P43241 Hyal5-201ENSMUST00000031689 1838 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Cdx2P43241 Gm4064-201ENSMUST00000187482 1561 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Cdx2P43241 Gm43920-201ENSMUST00000204953 2159 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Cdx2P43241 Vmn1r84-202ENSMUST00000226408 2898 ntAPPRIS ALT2 BASIC4.48□□□□□ -1.69
Cdx2P43241 Gm43011-201ENSMUST00000197897 4433 ntBASIC4.48□□□□□ -1.69
Cdx2P43241 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
Cdx2P43241 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Cdx2P43241 Cyp4a31-201ENSMUST00000030480 2396 ntTSL 2 BASIC4.48□□□□□ -1.69
Cdx2P43241 Gm43164-201ENSMUST00000202529 2128 ntBASIC4.48□□□□□ -1.69
Cdx2P43241 Cftr-204ENSMUST00000129452 2835 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Cdx2P43241 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Cdx2P43241 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Cdx2P43241 Gm19666-201ENSMUST00000198176 1893 ntBASIC4.48□□□□□ -1.69
Cdx2P43241 Phf11d-201ENSMUST00000095157 2666 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Cdx2P43241 Gm26760-201ENSMUST00000181901 1604 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Cdx2P43241 Gm23273-201ENSMUST00000104058 135 ntBASIC4.48□□□□□ -1.69
Cdx2P43241 Gm23481-201ENSMUST00000104173 131 ntBASIC4.48□□□□□ -1.69
Cdx2P43241 Olfr1330-202ENSMUST00000105035 1027 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
Cdx2P43241 Gm13503-201ENSMUST00000119017 446 ntBASIC4.48□□□□□ -1.69
Cdx2P43241 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC4.48□□□□□ -1.69
Cdx2P43241 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Cdx2P43241 Gm21999-201ENSMUST00000165985 387 ntBASIC4.48□□□□□ -1.69
Cdx2P43241 Gm22367-201ENSMUST00000178930 132 ntBASIC4.48□□□□□ -1.69
Cdx2P43241 Gm28543-201ENSMUST00000188986 509 ntTSL 5 BASIC4.48□□□□□ -1.69
Cdx2P43241 Gm6649-201ENSMUST00000199743 1165 ntBASIC4.48□□□□□ -1.69
Cdx2P43241 Gm42579-201ENSMUST00000200512 734 ntBASIC4.48□□□□□ -1.69
Cdx2P43241 Gm42458-201ENSMUST00000201914 369 ntBASIC4.48□□□□□ -1.69
Cdx2P43241 Gm45434-201ENSMUST00000210550 293 ntBASIC4.48□□□□□ -1.69
Cdx2P43241 Gm3912-203ENSMUST00000211024 367 ntBASIC4.48□□□□□ -1.69
Cdx2P43241 AC132384.5-201ENSMUST00000218562 226 ntBASIC4.48□□□□□ -1.69
Cdx2P43241 AC164116.1-201ENSMUST00000225810 622 ntBASIC4.48□□□□□ -1.69
Cdx2P43241 Olfr437-201ENSMUST00000060243 1018 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Cdx2P43241 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms