Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Olfr1159-ps1-201ENSMUST00000117651 913 ntBASIC4.68□□□□□ -1.66
HttP42859 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC4.68□□□□□ -1.66
HttP42859 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC4.68□□□□□ -1.66
HttP42859 Gm25535-201ENSMUST00000175364 125 ntBASIC4.68□□□□□ -1.66
HttP42859 Gm21045-201ENSMUST00000183058 1020 ntBASIC4.68□□□□□ -1.66
HttP42859 Gm35876-201ENSMUST00000205044 459 ntBASIC4.68□□□□□ -1.66
HttP42859 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC4.68□□□□□ -1.66
HttP42859 Gal3st2c-201ENSMUST00000097632 9667 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HttP42859 Kcnk10-202ENSMUST00000221240 7460 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
HttP42859 Satb1-213ENSMUST00000169480 6194 ntAPPRIS P2 TSL 5 BASIC4.67□□□□□ -1.66
HttP42859 Atf6-201ENSMUST00000027974 7246 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HttP42859 Olfr133-203ENSMUST00000215078 3130 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
HttP42859 Gm25407-201ENSMUST00000104102 134 ntBASIC4.67□□□□□ -1.66
HttP42859 Gm11212-201ENSMUST00000118337 618 ntBASIC4.67□□□□□ -1.66
HttP42859 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HttP42859 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC4.67□□□□□ -1.66
HttP42859 Gm4410-201ENSMUST00000199349 686 ntBASIC4.67□□□□□ -1.66
HttP42859 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
HttP42859 Mrps25-203ENSMUST00000140438 6073 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HttP42859 Gm26655-203ENSMUST00000181095 2078 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HttP42859 Gm26680-203ENSMUST00000181701 2078 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HttP42859 Gm26630-204ENSMUST00000181759 2078 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HttP42859 Gm26650-204ENSMUST00000181881 2078 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HttP42859 AC174797.3-203ENSMUST00000225749 2078 ntBASIC4.67□□□□□ -1.66
HttP42859 Gm38125-201ENSMUST00000194136 3438 ntBASIC4.67□□□□□ -1.66
HttP42859 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC4.67□□□□□ -1.66
HttP42859 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HttP42859 Kcnt2-203ENSMUST00000120796 3540 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
HttP42859 Olfr943-202ENSMUST00000213176 8275 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
HttP42859 Sh3d19-201ENSMUST00000107664 6414 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HttP42859 Olfr495-202ENSMUST00000215215 2460 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
HttP42859 Gm28359-201ENSMUST00000187470 1322 ntBASIC4.67□□□□□ -1.66
HttP42859 Syt14-203ENSMUST00000195354 7882 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
HttP42859 Gm24477-201ENSMUST00000157438 103 ntBASIC4.67□□□□□ -1.66
HttP42859 Gm17060-201ENSMUST00000172394 824 ntBASIC4.67□□□□□ -1.66
HttP42859 Gm32536-201ENSMUST00000205209 445 ntBASIC4.67□□□□□ -1.66
HttP42859 Sult2a7-203ENSMUST00000210034 870 ntTSL 5 BASIC4.67□□□□□ -1.66
HttP42859 AC154738.1-201ENSMUST00000227054 368 ntBASIC4.67□□□□□ -1.66
HttP42859 AC130547.1-201ENSMUST00000228079 1047 ntBASIC4.67□□□□□ -1.66
HttP42859 Gm23925-201ENSMUST00000082471 132 ntBASIC4.67□□□□□ -1.66
HttP42859 Slc15a2-201ENSMUST00000023616 3993 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
HttP42859 Abca8b-201ENSMUST00000020948 7423 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
HttP42859 Gm37806-201ENSMUST00000194524 6387 ntBASIC4.67□□□□□ -1.66
HttP42859 Gm43361-201ENSMUST00000196562 4690 ntBASIC4.66□□□□□ -1.66
HttP42859 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HttP42859 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
HttP42859 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HttP42859 Gm15231-201ENSMUST00000119174 447 ntBASIC4.66□□□□□ -1.66
HttP42859 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC4.66□□□□□ -1.66
HttP42859 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC4.66□□□□□ -1.66
HttP42859 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC4.66□□□□□ -1.66
HttP42859 Olfr570-201ENSMUST00000098215 1045 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
HttP42859 Zfp182-202ENSMUST00000115333 3130 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
HttP42859 Fam205c-202ENSMUST00000107978 1451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
HttP42859 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HttP42859 Olfr947-ps1-201ENSMUST00000214075 2165 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
HttP42859 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
HttP42859 Gm43523-201ENSMUST00000197397 2878 ntBASIC4.66□□□□□ -1.66
HttP42859 Gm43428-201ENSMUST00000200108 3845 ntBASIC4.66□□□□□ -1.66
HttP42859 Dclk1-202ENSMUST00000070418 7012 ntTSL 5 BASIC4.66□□□□□ -1.66
HttP42859 Sptbn1-202ENSMUST00000011877 8238 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HttP42859 Akap2-204ENSMUST00000102902 6993 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HttP42859 Olfr348-203ENSMUST00000214909 3634 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
HttP42859 Olfr1341-202ENSMUST00000214131 4300 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
HttP42859 Zcchc9-ps-201ENSMUST00000117884 786 ntBASIC4.66□□□□□ -1.66
HttP42859 Gm14240-201ENSMUST00000120353 546 ntBASIC4.66□□□□□ -1.66
HttP42859 Gm45359-201ENSMUST00000210635 427 ntBASIC4.66□□□□□ -1.66
HttP42859 Vmn1r35-201ENSMUST00000071414 891 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
HttP42859 AC129085.3-201ENSMUST00000225686 1705 ntBASIC4.66□□□□□ -1.66
HttP42859 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
HttP42859 Ptprj-201ENSMUST00000111493 7124 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
HttP42859 Egfr-201ENSMUST00000020329 10208 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HttP42859 Gm43085-201ENSMUST00000202859 3132 ntBASIC4.66□□□□□ -1.66
HttP42859 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HttP42859 Gm6162-201ENSMUST00000194870 2930 ntBASIC4.66□□□□□ -1.66
HttP42859 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HttP42859 Unc13c-202ENSMUST00000184666 8796 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
HttP42859 Gm12820-201ENSMUST00000119233 342 ntBASIC4.66□□□□□ -1.66
HttP42859 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC4.66□□□□□ -1.66
HttP42859 4933433F19Rik-201ENSMUST00000180571 1088 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HttP42859 Gm43855-201ENSMUST00000197462 507 ntBASIC4.66□□□□□ -1.66
HttP42859 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC4.66□□□□□ -1.66
HttP42859 Olfr988-201ENSMUST00000099928 1076 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
HttP42859 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
HttP42859 Zfp442-201ENSMUST00000109916 2922 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
HttP42859 Gm38243-201ENSMUST00000194737 1567 ntBASIC4.65□□□□□ -1.66
HttP42859 Gm42715-201ENSMUST00000189629 12746 ntAPPRIS P5 TSL 5 BASIC4.65□□□□□ -1.66
HttP42859 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
HttP42859 Plcb4-201ENSMUST00000035646 3635 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
HttP42859 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
HttP42859 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
HttP42859 Gm7241-201ENSMUST00000159853 357 ntBASIC4.65□□□□□ -1.66
HttP42859 Gm28655-201ENSMUST00000191538 692 ntBASIC4.65□□□□□ -1.66
HttP42859 Olfr529-ps1-201ENSMUST00000211097 928 ntBASIC4.65□□□□□ -1.66
HttP42859 Gm45722-201ENSMUST00000213075 466 ntBASIC4.65□□□□□ -1.66
HttP42859 BC023105-201ENSMUST00000073997 1227 ntBASIC4.65□□□□□ -1.66
HttP42859 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
HttP42859 Olfr536-201ENSMUST00000064392 3853 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
HttP42859 BC003331-204ENSMUST00000097547 2851 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
HttP42859 Olfr890-202ENSMUST00000213458 5475 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms