Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 Gm42539-201ENSMUST00000197009 308 ntBASIC3.8□□□□□ -1.8
VhlP40338 Gm43408-201ENSMUST00000198263 440 ntBASIC3.8□□□□□ -1.8
VhlP40338 Gm43418-201ENSMUST00000201334 428 ntBASIC3.8□□□□□ -1.8
VhlP40338 Gm44184-201ENSMUST00000204290 132 ntBASIC3.8□□□□□ -1.8
VhlP40338 Gm18924-201ENSMUST00000211929 316 ntBASIC3.8□□□□□ -1.8
VhlP40338 AC122305.3-201ENSMUST00000214762 361 ntTSL 3 BASIC3.8□□□□□ -1.8
VhlP40338 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC3.8□□□□□ -1.8
VhlP40338 Gm2099-201ENSMUST00000220979 412 ntBASIC3.8□□□□□ -1.8
VhlP40338 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC3.8□□□□□ -1.8
VhlP40338 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC3.8□□□□□ -1.8
VhlP40338 AC153153.2-201ENSMUST00000223572 411 ntBASIC3.8□□□□□ -1.8
VhlP40338 1700129C05Rik-201ENSMUST00000022548 1067 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
VhlP40338 Pik3c2g-201ENSMUST00000032353 1206 ntTSL 5 BASIC3.8□□□□□ -1.8
VhlP40338 Gm22741-201ENSMUST00000083438 165 ntBASIC3.8□□□□□ -1.8
VhlP40338 Gm25187-201ENSMUST00000083906 133 ntBASIC3.8□□□□□ -1.8
VhlP40338 Olfr1100-201ENSMUST00000094913 969 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
VhlP40338 Olfr1275-201ENSMUST00000099620 1020 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
VhlP40338 Gm6043-201ENSMUST00000099961 492 ntBASIC3.8□□□□□ -1.8
VhlP40338 Gm7988-201ENSMUST00000196623 2297 ntBASIC3.8□□□□□ -1.8
VhlP40338 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
VhlP40338 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
VhlP40338 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
VhlP40338 4933403O08Rik-203ENSMUST00000164272 1517 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
VhlP40338 9630002D21Rik-202ENSMUST00000222033 2345 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
VhlP40338 Olfr1131-203ENSMUST00000216756 1459 ntTSL 3 BASIC3.79□□□□□ -1.8
VhlP40338 Gm15304-201ENSMUST00000122150 2640 ntBASIC3.79□□□□□ -1.8
VhlP40338 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
VhlP40338 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
VhlP40338 Fbxl13-202ENSMUST00000115234 2143 ntTSL 5 BASIC3.79□□□□□ -1.8
VhlP40338 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
VhlP40338 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
VhlP40338 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
VhlP40338 Gm32444-201ENSMUST00000195147 3511 ntBASIC3.79□□□□□ -1.8
VhlP40338 Gm43185-201ENSMUST00000197507 2775 ntBASIC3.79□□□□□ -1.8
VhlP40338 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC3.79□□□□□ -1.8
VhlP40338 Prl2c1-202ENSMUST00000110335 852 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
VhlP40338 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
VhlP40338 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC3.79□□□□□ -1.8
VhlP40338 Mir1188-201ENSMUST00000116756 120 ntBASIC3.79□□□□□ -1.8
VhlP40338 Gm13033-201ENSMUST00000117591 1057 ntBASIC3.79□□□□□ -1.8
VhlP40338 Gm11550-201ENSMUST00000118210 699 ntBASIC3.79□□□□□ -1.8
VhlP40338 Gm15923-201ENSMUST00000119300 1169 ntBASIC3.79□□□□□ -1.8
VhlP40338 Gm12978-201ENSMUST00000121250 522 ntBASIC3.79□□□□□ -1.8
VhlP40338 Gm22378-201ENSMUST00000157481 111 ntBASIC3.79□□□□□ -1.8
VhlP40338 Gm25447-201ENSMUST00000158997 128 ntBASIC3.79□□□□□ -1.8
VhlP40338 Trbv10-201ENSMUST00000168322 289 ntBASIC3.79□□□□□ -1.8
VhlP40338 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
VhlP40338 Gm7876-201ENSMUST00000169465 984 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
VhlP40338 Gm6337-202ENSMUST00000170613 997 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
VhlP40338 Gm20663-201ENSMUST00000176647 474 ntTSL 3 BASIC3.79□□□□□ -1.8
VhlP40338 Gm24465-201ENSMUST00000178398 107 ntBASIC3.79□□□□□ -1.8
VhlP40338 Gm44389-201ENSMUST00000203795 182 ntBASIC3.79□□□□□ -1.8
VhlP40338 Gm43892-201ENSMUST00000204373 265 ntBASIC3.79□□□□□ -1.8
VhlP40338 Gm36633-201ENSMUST00000205873 647 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
VhlP40338 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
VhlP40338 Gm45276-201ENSMUST00000209549 1086 ntBASIC3.79□□□□□ -1.8
VhlP40338 Gm19256-201ENSMUST00000218550 231 ntBASIC3.79□□□□□ -1.8
VhlP40338 AC153961.2-201ENSMUST00000218877 164 ntBASIC3.79□□□□□ -1.8
VhlP40338 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC3.79□□□□□ -1.8
VhlP40338 9430078K24Rik-202ENSMUST00000219857 348 ntTSL 3 BASIC3.79□□□□□ -1.8
VhlP40338 AC174776.1-201ENSMUST00000221509 405 ntBASIC3.79□□□□□ -1.8
VhlP40338 AC174776.2-201ENSMUST00000222561 405 ntBASIC3.79□□□□□ -1.8
VhlP40338 AC131745.1-201ENSMUST00000223660 330 ntBASIC3.79□□□□□ -1.8
VhlP40338 AC117202.1-201ENSMUST00000227007 445 ntBASIC3.79□□□□□ -1.8
VhlP40338 Olfr135-201ENSMUST00000076245 1079 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
VhlP40338 Gm25140-201ENSMUST00000083254 140 ntBASIC3.79□□□□□ -1.8
VhlP40338 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC3.79□□□□□ -1.8
VhlP40338 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
VhlP40338 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
VhlP40338 Olfr266-202ENSMUST00000213616 2195 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
VhlP40338 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
VhlP40338 Olfr672-202ENSMUST00000213942 1490 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
VhlP40338 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
VhlP40338 Gm42598-201ENSMUST00000200110 2437 ntBASIC3.79□□□□□ -1.8
VhlP40338 Gm44542-201ENSMUST00000208677 4314 ntBASIC3.79□□□□□ -1.8
VhlP40338 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
VhlP40338 Ptgs2os-202ENSMUST00000181915 2937 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VhlP40338 Zfp931-201ENSMUST00000108923 1372 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VhlP40338 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
VhlP40338 Olfr556-203ENSMUST00000217526 3741 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
VhlP40338 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
VhlP40338 Gm37363-201ENSMUST00000192336 2233 ntBASIC3.78□□□□□ -1.8
VhlP40338 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC3.78□□□□□ -1.8
VhlP40338 Gm12261-201ENSMUST00000117499 645 ntBASIC3.78□□□□□ -1.8
VhlP40338 Gm12311-201ENSMUST00000118803 374 ntBASIC3.78□□□□□ -1.8
VhlP40338 Gm15361-201ENSMUST00000119320 444 ntBASIC3.78□□□□□ -1.8
VhlP40338 Gm13435-201ENSMUST00000120111 1023 ntBASIC3.78□□□□□ -1.8
VhlP40338 Gm5391-201ENSMUST00000121155 613 ntBASIC3.78□□□□□ -1.8
VhlP40338 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC3.78□□□□□ -1.8
VhlP40338 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC3.78□□□□□ -1.8
VhlP40338 4933416I08Rik-201ENSMUST00000125315 703 ntBASIC3.78□□□□□ -1.8
VhlP40338 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC3.78□□□□□ -1.8
VhlP40338 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC3.78□□□□□ -1.8
VhlP40338 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC3.78□□□□□ -1.8
VhlP40338 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC3.78□□□□□ -1.8
VhlP40338 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VhlP40338 Gm4675-201ENSMUST00000163396 502 ntTSL 3 BASIC3.78□□□□□ -1.8
VhlP40338 Gm17152-201ENSMUST00000172430 535 ntBASIC3.78□□□□□ -1.8
VhlP40338 Gm25037-201ENSMUST00000175418 110 ntBASIC3.78□□□□□ -1.8
VhlP40338 Olfr1391-201ENSMUST00000187509 938 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms