Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Vmn1r33-201ENSMUST00000079678 1036 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Traf1P39428 F630028O10Rik-201ENSMUST00000133125 2771 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Traf1P39428 Serpinb9b-201ENSMUST00000006392 3253 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Traf1P39428 Abcb5-201ENSMUST00000035515 3876 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Traf1P39428 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Traf1P39428 Inpp4b-209ENSMUST00000172031 8067 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Traf1P39428 Olfr1443-201ENSMUST00000049724 4343 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Traf1P39428 Map3k19-201ENSMUST00000061512 3936 ntAPPRIS P2 TSL 5 BASIC5.74□□□□□ -1.49
Traf1P39428 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Traf1P39428 Aspn-201ENSMUST00000021820 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Traf1P39428 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Traf1P39428 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Traf1P39428 Gm18491-201ENSMUST00000192492 1594 ntBASIC5.73□□□□□ -1.49
Traf1P39428 Gm21037-201ENSMUST00000209086 2608 ntBASIC5.73□□□□□ -1.49
Traf1P39428 A230072E10Rik-202ENSMUST00000175825 3292 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Traf1P39428 Gm10319-201ENSMUST00000078431 1355 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Traf1P39428 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Traf1P39428 Mir193b-201ENSMUST00000103784 79 ntBASIC5.73□□□□□ -1.49
Traf1P39428 Macrod2-203ENSMUST00000110061 887 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Traf1P39428 Gm14806-201ENSMUST00000116606 2110 ntBASIC5.73□□□□□ -1.49
Traf1P39428 Gm22343-201ENSMUST00000122648 286 ntBASIC5.73□□□□□ -1.49
Traf1P39428 Gm24690-201ENSMUST00000157759 97 ntBASIC5.73□□□□□ -1.49
Traf1P39428 Gm26352-201ENSMUST00000158223 125 ntBASIC5.73□□□□□ -1.49
Traf1P39428 Gm8374-201ENSMUST00000163826 672 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Traf1P39428 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Traf1P39428 Gm21698-201ENSMUST00000178487 666 ntTSL 5 BASIC5.73□□□□□ -1.49
Traf1P39428 Gm19585-201ENSMUST00000186007 587 ntTSL 2 BASIC5.73□□□□□ -1.49
Traf1P39428 Gm21742-201ENSMUST00000189352 548 ntBASIC5.73□□□□□ -1.49
Traf1P39428 Gm20830-202ENSMUST00000190426 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Traf1P39428 Gm29332-201ENSMUST00000190829 227 ntBASIC5.73□□□□□ -1.49
Traf1P39428 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC5.73□□□□□ -1.49
Traf1P39428 Gm5995-201ENSMUST00000204107 1273 ntBASIC5.73□□□□□ -1.49
Traf1P39428 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC5.73□□□□□ -1.49
Traf1P39428 AC138284.2-201ENSMUST00000213982 567 ntBASIC5.73□□□□□ -1.49
Traf1P39428 CT025625.1-201ENSMUST00000217786 460 ntTSL 5 BASIC5.73□□□□□ -1.49
Traf1P39428 AC154840.1-201ENSMUST00000225216 408 ntBASIC5.73□□□□□ -1.49
Traf1P39428 Serpinb3d-201ENSMUST00000023861 1216 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Traf1P39428 Olfr803-201ENSMUST00000056736 927 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Traf1P39428 Olfr509-201ENSMUST00000061690 1075 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Traf1P39428 Olfr813-201ENSMUST00000064893 933 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Traf1P39428 Gm23407-201ENSMUST00000082538 91 ntBASIC5.73□□□□□ -1.49
Traf1P39428 Xlr5c-201ENSMUST00000088450 540 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Traf1P39428 Olfr606-201ENSMUST00000098200 960 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Traf1P39428 Olfr50-202ENSMUST00000216753 4531 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Traf1P39428 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Traf1P39428 Ccr2-204ENSMUST00000171719 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Traf1P39428 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Traf1P39428 Agbl1-201ENSMUST00000026854 3452 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
Traf1P39428 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Traf1P39428 Gm15394-201ENSMUST00000119656 1308 ntBASIC5.73□□□□□ -1.49
Traf1P39428 Gm44027-201ENSMUST00000203419 3480 ntBASIC5.72□□□□□ -1.49
Traf1P39428 Gm43428-201ENSMUST00000200108 3845 ntBASIC5.72□□□□□ -1.49
Traf1P39428 Zscan4a-201ENSMUST00000210573 2279 ntBASIC5.72□□□□□ -1.49
Traf1P39428 Mup6-201ENSMUST00000107517 926 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Traf1P39428 Gm12245-201ENSMUST00000117266 357 ntBASIC5.72□□□□□ -1.49
Traf1P39428 Mup-ps18-201ENSMUST00000120145 531 ntBASIC5.72□□□□□ -1.49
Traf1P39428 Gm24188-201ENSMUST00000157980 108 ntBASIC5.72□□□□□ -1.49
Traf1P39428 Gm25534-201ENSMUST00000175365 125 ntBASIC5.72□□□□□ -1.49
Traf1P39428 Gm26895-201ENSMUST00000181295 619 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Traf1P39428 Gm19206-201ENSMUST00000186401 827 ntBASIC5.72□□□□□ -1.49
Traf1P39428 9130024F11Rik-203ENSMUST00000187858 447 ntTSL 2 BASIC5.72□□□□□ -1.49
Traf1P39428 Gm42643-201ENSMUST00000200504 279 ntBASIC5.72□□□□□ -1.49
Traf1P39428 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC5.72□□□□□ -1.49
Traf1P39428 Olfr1077-ps1-201ENSMUST00000213225 1212 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
Traf1P39428 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Traf1P39428 Olfr1233-204ENSMUST00000216561 1192 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Traf1P39428 AC172027.1-201ENSMUST00000217659 337 ntBASIC5.72□□□□□ -1.49
Traf1P39428 AC125484.1-201ENSMUST00000223218 234 ntBASIC5.72□□□□□ -1.49
Traf1P39428 AC133910.1-201ENSMUST00000228128 624 ntBASIC5.72□□□□□ -1.49
Traf1P39428 Gnrhr-201ENSMUST00000031172 1211 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Traf1P39428 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Traf1P39428 Gm37488-201ENSMUST00000195434 3374 ntBASIC5.72□□□□□ -1.49
Traf1P39428 Olfr826-202ENSMUST00000203720 1535 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Traf1P39428 Vmn2r-ps11-201ENSMUST00000176568 2730 ntBASIC5.72□□□□□ -1.49
Traf1P39428 Kynu-201ENSMUST00000028223 2733 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Traf1P39428 Evi2-202ENSMUST00000170422 3944 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Traf1P39428 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Traf1P39428 C730045M19Rik-201ENSMUST00000201944 1315 ntBASIC5.72□□□□□ -1.49
Traf1P39428 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
Traf1P39428 Olfr1223-201ENSMUST00000217342 2333 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.49
Traf1P39428 Gm5715-201ENSMUST00000196854 1465 ntBASIC5.71□□□□□ -1.49
Traf1P39428 Gm18954-201ENSMUST00000222200 1792 ntBASIC5.71□□□□□ -1.5
Traf1P39428 AC122357.1-201ENSMUST00000221652 1515 ntBASIC5.71□□□□□ -1.5
Traf1P39428 Gm36529-201ENSMUST00000222495 1529 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Traf1P39428 Fgf7-201ENSMUST00000064794 2672 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Traf1P39428 Gm14725-201ENSMUST00000120324 828 ntBASIC5.71□□□□□ -1.5
Traf1P39428 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Traf1P39428 Gm15445-201ENSMUST00000146700 603 ntTSL 5 BASIC5.71□□□□□ -1.5
Traf1P39428 Gm17546-201ENSMUST00000168960 733 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Traf1P39428 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Traf1P39428 Gm10074-201ENSMUST00000174543 249 ntBASIC5.71□□□□□ -1.5
Traf1P39428 Gm21244-201ENSMUST00000178447 684 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Traf1P39428 4930509E16Rik-201ENSMUST00000181405 1191 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Traf1P39428 1700054K19Rik-201ENSMUST00000186102 452 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Traf1P39428 Gm21617-201ENSMUST00000188297 691 ntBASIC5.71□□□□□ -1.5
Traf1P39428 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC5.71□□□□□ -1.5
Traf1P39428 Gm18382-201ENSMUST00000194394 582 ntBASIC5.71□□□□□ -1.5
Traf1P39428 Gm18843-201ENSMUST00000194982 719 ntBASIC5.71□□□□□ -1.5
Traf1P39428 Ighv1-21-1-201ENSMUST00000195790 351 ntBASIC5.71□□□□□ -1.5
Traf1P39428 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms