Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm3623-201ENSMUST00000173643 2747 ntBASIC5.02□□□□□ -1.61
Lire1P11260 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
Lire1P11260 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Lire1P11260 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Lire1P11260 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Lire1P11260 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Lire1P11260 Primpol-201ENSMUST00000040468 3772 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Lire1P11260 Cyp2c70-201ENSMUST00000051846 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Lire1P11260 Mir1188-201ENSMUST00000116756 120 ntBASIC5.01□□□□□ -1.61
Lire1P11260 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC5.01□□□□□ -1.61
Lire1P11260 Gm8129-201ENSMUST00000118230 213 ntBASIC5.01□□□□□ -1.61
Lire1P11260 Gm14750-201ENSMUST00000118262 516 ntBASIC5.01□□□□□ -1.61
Lire1P11260 1110059G10Rik-202ENSMUST00000118422 723 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Lire1P11260 Arl6-203ENSMUST00000118438 875 ntTSL 3 BASIC5.01□□□□□ -1.61
Lire1P11260 Gm5754-201ENSMUST00000118774 892 ntBASIC5.01□□□□□ -1.61
Lire1P11260 Oosp3-202ENSMUST00000119053 621 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Lire1P11260 Gm15034-201ENSMUST00000120043 349 ntBASIC5.01□□□□□ -1.61
Lire1P11260 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC5.01□□□□□ -1.61
Lire1P11260 Gm7309-201ENSMUST00000121670 581 ntBASIC5.01□□□□□ -1.61
Lire1P11260 Olfr118-201ENSMUST00000122036 966 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Lire1P11260 Gm15747-201ENSMUST00000141216 460 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Lire1P11260 Gm23233-201ENSMUST00000157301 137 ntBASIC5.01□□□□□ -1.61
Lire1P11260 Gm22895-201ENSMUST00000157508 308 ntBASIC5.01□□□□□ -1.61
Lire1P11260 Gm24692-201ENSMUST00000157761 146 ntBASIC5.01□□□□□ -1.61
Lire1P11260 Gm24295-201ENSMUST00000158298 131 ntBASIC5.01□□□□□ -1.61
Lire1P11260 Gm24675-201ENSMUST00000158757 259 ntBASIC5.01□□□□□ -1.61
Lire1P11260 Gas5-209ENSMUST00000159663 346 ntTSL 3 BASIC5.01□□□□□ -1.61
Lire1P11260 Gm3141-201ENSMUST00000168726 499 ntBASIC5.01□□□□□ -1.61
Lire1P11260 Gm3696-202ENSMUST00000179898 612 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Lire1P11260 Mir6986-201ENSMUST00000184483 58 ntBASIC5.01□□□□□ -1.61
Lire1P11260 Gm29570-201ENSMUST00000185813 681 ntTSL 3 BASIC5.01□□□□□ -1.61
Lire1P11260 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC5.01□□□□□ -1.61
Lire1P11260 Gm29284-201ENSMUST00000188363 255 ntBASIC5.01□□□□□ -1.61
Lire1P11260 Gm42522-201ENSMUST00000196071 255 ntBASIC5.01□□□□□ -1.61
Lire1P11260 Gm42720-201ENSMUST00000196813 300 ntBASIC5.01□□□□□ -1.61
Lire1P11260 Gm31306-201ENSMUST00000197517 508 ntBASIC5.01□□□□□ -1.61
Lire1P11260 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC5.01□□□□□ -1.61
Lire1P11260 Gm5735-201ENSMUST00000207053 167 ntBASIC5.01□□□□□ -1.61
Lire1P11260 Olfr1310-201ENSMUST00000207169 1009 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Lire1P11260 Gm18587-201ENSMUST00000213736 841 ntBASIC5.01□□□□□ -1.61
Lire1P11260 Gm29884-201ENSMUST00000218403 453 ntBASIC5.01□□□□□ -1.61
Lire1P11260 AC154417.1-201ENSMUST00000223876 476 ntBASIC5.01□□□□□ -1.61
Lire1P11260 Olfr307-201ENSMUST00000069279 1012 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Lire1P11260 Gm23795-201ENSMUST00000084006 137 ntBASIC5.01□□□□□ -1.61
Lire1P11260 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Lire1P11260 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
Lire1P11260 Olfr1195-201ENSMUST00000099818 927 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Lire1P11260 Olfr1160-201ENSMUST00000099839 960 ntBASIC5.01□□□□□ -1.61
Lire1P11260 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Lire1P11260 Gm5662-201ENSMUST00000101168 1840 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Lire1P11260 Gm44678-201ENSMUST00000207828 2775 ntBASIC5.01□□□□□ -1.61
Lire1P11260 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Lire1P11260 Gm45517-201ENSMUST00000209973 2468 ntBASIC5.01□□□□□ -1.61
Lire1P11260 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Lire1P11260 Kbtbd8-202ENSMUST00000119582 4518 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Lire1P11260 Olfr101-203ENSMUST00000215392 2899 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Lire1P11260 Gm36962-201ENSMUST00000192114 1761 ntBASIC5.01□□□□□ -1.61
Lire1P11260 Olfr699-203ENSMUST00000216307 4193 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Lire1P11260 Tcp1-ps1-201ENSMUST00000120941 1466 ntBASIC5□□□□□ -1.61
Lire1P11260 Gm26743-201ENSMUST00000180913 1726 ntTSL 1 (best) BASIC5□□□□□ -1.61
Lire1P11260 Hbp1-204ENSMUST00000175686 1315 ntTSL 1 (best) BASIC5□□□□□ -1.61
Lire1P11260 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Lire1P11260 Gm26522-201ENSMUST00000181565 1555 ntTSL 1 (best) BASIC5□□□□□ -1.61
Lire1P11260 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Lire1P11260 Gm5155-201ENSMUST00000072381 2841 ntBASIC5□□□□□ -1.61
Lire1P11260 Gm24935-201ENSMUST00000103770 110 ntBASIC5□□□□□ -1.61
Lire1P11260 Gm8595-201ENSMUST00000118250 630 ntBASIC5□□□□□ -1.61
Lire1P11260 Gm15400-201ENSMUST00000118944 601 ntBASIC5□□□□□ -1.61
Lire1P11260 Gm14871-201ENSMUST00000119056 194 ntBASIC5□□□□□ -1.61
Lire1P11260 Gm14986-201ENSMUST00000121262 1002 ntBASIC5□□□□□ -1.61
Lire1P11260 Olfr1376-ps1-201ENSMUST00000121306 955 ntBASIC5□□□□□ -1.61
Lire1P11260 Gm15848-203ENSMUST00000136015 482 ntTSL 5 BASIC5□□□□□ -1.61
Lire1P11260 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC5□□□□□ -1.61
Lire1P11260 Gm17732-201ENSMUST00000163259 821 ntAPPRIS P1 BASIC5□□□□□ -1.61
Lire1P11260 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Lire1P11260 Mir6539-201ENSMUST00000183732 110 ntBASIC5□□□□□ -1.61
Lire1P11260 Mir6417-201ENSMUST00000183815 116 ntBASIC5□□□□□ -1.61
Lire1P11260 Gm27225-201ENSMUST00000183833 557 ntBASIC5□□□□□ -1.61
Lire1P11260 Lockd-204ENSMUST00000184991 243 ntTSL 5 BASIC5□□□□□ -1.61
Lire1P11260 Mrgpra18-ps-201ENSMUST00000188059 907 ntBASIC5□□□□□ -1.61
Lire1P11260 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC5□□□□□ -1.61
Lire1P11260 1700074H08Rik-201ENSMUST00000189831 555 ntTSL 1 (best) BASIC5□□□□□ -1.61
Lire1P11260 Gm19585-202ENSMUST00000191539 327 ntTSL 3 BASIC5□□□□□ -1.61
Lire1P11260 Gm37193-201ENSMUST00000193087 513 ntBASIC5□□□□□ -1.61
Lire1P11260 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC5□□□□□ -1.61
Lire1P11260 A330074H02Rik-201ENSMUST00000194667 1039 ntBASIC5□□□□□ -1.61
Lire1P11260 Gm6260-202ENSMUST00000197170 921 ntTSL 1 (best) BASIC5□□□□□ -1.61
Lire1P11260 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC5□□□□□ -1.61
Lire1P11260 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC5□□□□□ -1.61
Lire1P11260 Gm4874-201ENSMUST00000203589 691 ntBASIC5□□□□□ -1.61
Lire1P11260 Gm43892-201ENSMUST00000204373 265 ntBASIC5□□□□□ -1.61
Lire1P11260 Gm45690-201ENSMUST00000210775 246 ntBASIC5□□□□□ -1.61
Lire1P11260 Gm7990-201ENSMUST00000212126 593 ntBASIC5□□□□□ -1.61
Lire1P11260 Gm5649-201ENSMUST00000217918 951 ntBASIC5□□□□□ -1.61
Lire1P11260 AC152169.2-201ENSMUST00000224558 613 ntBASIC5□□□□□ -1.61
Lire1P11260 AC160120.1-201ENSMUST00000227446 663 ntBASIC5□□□□□ -1.61
Lire1P11260 AC121912.1-201ENSMUST00000227525 1201 ntBASIC5□□□□□ -1.61
Lire1P11260 AC154846.2-201ENSMUST00000228805 424 ntBASIC5□□□□□ -1.61
Lire1P11260 Tmed11-201ENSMUST00000004943 763 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Lire1P11260 Olfr202-201ENSMUST00000049859 924 ntAPPRIS P1 BASIC5□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms