Protein–RNA interactions for Protein: O70258

Sgce, Epsilon-sarcoglycan, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgceO70258 Gm16106-201ENSMUST00000119187 294 ntBASIC4.24□□□□□ -1.73
SgceO70258 Gm14175-201ENSMUST00000119835 241 ntBASIC4.24□□□□□ -1.73
SgceO70258 Gm13867-201ENSMUST00000120844 395 ntBASIC4.24□□□□□ -1.73
SgceO70258 Gm12893-201ENSMUST00000121732 275 ntBASIC4.24□□□□□ -1.73
SgceO70258 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC4.24□□□□□ -1.73
SgceO70258 Gm16254-201ENSMUST00000131528 730 ntBASIC4.24□□□□□ -1.73
SgceO70258 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC4.24□□□□□ -1.73
SgceO70258 Gm22940-201ENSMUST00000158560 155 ntBASIC4.24□□□□□ -1.73
SgceO70258 Gm16094-201ENSMUST00000162784 427 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SgceO70258 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
SgceO70258 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
SgceO70258 Obox3-ps8-201ENSMUST00000177182 960 ntBASIC4.24□□□□□ -1.73
SgceO70258 Tppp2-202ENSMUST00000177625 627 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
SgceO70258 Gm37401-201ENSMUST00000192053 347 ntTSL 5 BASIC4.24□□□□□ -1.73
SgceO70258 4930540E01Rik-201ENSMUST00000192569 1146 ntBASIC4.24□□□□□ -1.73
SgceO70258 Gm8939-201ENSMUST00000192577 964 ntBASIC4.24□□□□□ -1.73
SgceO70258 Gm8891-201ENSMUST00000198546 832 ntBASIC4.24□□□□□ -1.73
SgceO70258 Gm43895-201ENSMUST00000203219 855 ntBASIC4.24□□□□□ -1.73
SgceO70258 Gm18325-201ENSMUST00000203228 835 ntBASIC4.24□□□□□ -1.73
SgceO70258 Gm44816-201ENSMUST00000206666 477 ntBASIC4.24□□□□□ -1.73
SgceO70258 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SgceO70258 Gm6049-201ENSMUST00000222369 458 ntBASIC4.24□□□□□ -1.73
SgceO70258 CT025525.4-201ENSMUST00000227728 277 ntBASIC4.24□□□□□ -1.73
SgceO70258 AC116724.1-201ENSMUST00000227900 972 ntBASIC4.24□□□□□ -1.73
SgceO70258 Olfr670-201ENSMUST00000050482 939 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
SgceO70258 Olfr1406-203ENSMUST00000215878 3149 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
SgceO70258 Pign-205ENSMUST00000186485 6759 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SgceO70258 Gm19744-204ENSMUST00000188936 4533 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SgceO70258 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SgceO70258 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
SgceO70258 Gm8674-201ENSMUST00000179367 3047 ntBASIC4.24□□□□□ -1.73
SgceO70258 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SgceO70258 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
SgceO70258 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC4.23□□□□□ -1.73
SgceO70258 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
SgceO70258 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
SgceO70258 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC4.23□□□□□ -1.73
SgceO70258 AC102431.1-201ENSMUST00000223773 1449 ntBASIC4.23□□□□□ -1.73
SgceO70258 Naa16-201ENSMUST00000022597 13223 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SgceO70258 Trbv13-2-201ENSMUST00000103270 340 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
SgceO70258 Gm13902-201ENSMUST00000120168 605 ntBASIC4.23□□□□□ -1.73
SgceO70258 Gm12041-201ENSMUST00000121606 602 ntBASIC4.23□□□□□ -1.73
SgceO70258 Gm14695-201ENSMUST00000121721 282 ntBASIC4.23□□□□□ -1.73
SgceO70258 Gm25179-201ENSMUST00000122632 128 ntBASIC4.23□□□□□ -1.73
SgceO70258 Gm23327-201ENSMUST00000157420 78 ntBASIC4.23□□□□□ -1.73
SgceO70258 Gm26153-201ENSMUST00000157433 127 ntBASIC4.23□□□□□ -1.73
SgceO70258 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC4.23□□□□□ -1.73
SgceO70258 Klrb1a-202ENSMUST00000171306 989 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
SgceO70258 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
SgceO70258 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC4.23□□□□□ -1.73
SgceO70258 Gm4617-201ENSMUST00000178993 331 ntBASIC4.23□□□□□ -1.73
SgceO70258 Mir6344-201ENSMUST00000183462 104 ntBASIC4.23□□□□□ -1.73
SgceO70258 Gm37631-201ENSMUST00000192275 364 ntBASIC4.23□□□□□ -1.73
SgceO70258 Gm37973-201ENSMUST00000195767 1289 ntBASIC4.23□□□□□ -1.73
SgceO70258 BC037156-201ENSMUST00000196993 430 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SgceO70258 Olfr1311-201ENSMUST00000208536 943 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
SgceO70258 Gm19170-201ENSMUST00000212440 1084 ntBASIC4.23□□□□□ -1.73
SgceO70258 AC155236.1-201ENSMUST00000220591 923 ntTSL 5 BASIC4.23□□□□□ -1.73
SgceO70258 CT009713.4-201ENSMUST00000224246 272 ntBASIC4.23□□□□□ -1.73
SgceO70258 3830408C21Rik-203ENSMUST00000224293 822 ntBASIC4.23□□□□□ -1.73
SgceO70258 AC154623.1-201ENSMUST00000224348 805 ntBASIC4.23□□□□□ -1.73
SgceO70258 AC160962.1-203ENSMUST00000225167 1105 ntAPPRIS P5 BASIC4.23□□□□□ -1.73
SgceO70258 AC166574.3-201ENSMUST00000226725 367 ntBASIC4.23□□□□□ -1.73
SgceO70258 Olfr774-201ENSMUST00000097164 939 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
SgceO70258 4930579C12Rik-202ENSMUST00000187015 3676 ntTSL 2 BASIC4.23□□□□□ -1.73
SgceO70258 AC131743.1-201ENSMUST00000222138 4024 ntBASIC4.23□□□□□ -1.73
SgceO70258 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
SgceO70258 Emcn-201ENSMUST00000119475 1357 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
SgceO70258 Ano5-203ENSMUST00000207717 2753 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SgceO70258 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC4.23□□□□□ -1.73
SgceO70258 Gm42615-201ENSMUST00000197704 1820 ntBASIC4.23□□□□□ -1.73
SgceO70258 Aadacl2-201ENSMUST00000169794 1590 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SgceO70258 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC4.23□□□□□ -1.73
SgceO70258 Ncoa7-207ENSMUST00000215740 7043 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
SgceO70258 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SgceO70258 Prr11-201ENSMUST00000051395 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SgceO70258 Gm26717-201ENSMUST00000181713 1418 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SgceO70258 A730046J19Rik-201ENSMUST00000135687 4707 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SgceO70258 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
SgceO70258 Olfr685-204ENSMUST00000217432 3246 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
SgceO70258 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC4.22□□□□□ -1.73
SgceO70258 AC168056.3-201ENSMUST00000225395 2540 ntBASIC4.22□□□□□ -1.73
SgceO70258 Gm42645-201ENSMUST00000201573 1627 ntBASIC4.22□□□□□ -1.73
SgceO70258 5330437M03Rik-201ENSMUST00000201318 4083 ntBASIC4.22□□□□□ -1.73
SgceO70258 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
SgceO70258 Gm36931-201ENSMUST00000192997 4801 ntBASIC4.22□□□□□ -1.73
SgceO70258 Gm8145-201ENSMUST00000118220 745 ntBASIC4.22□□□□□ -1.73
SgceO70258 Gm4853-201ENSMUST00000119359 394 ntBASIC4.22□□□□□ -1.73
SgceO70258 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
SgceO70258 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC4.22□□□□□ -1.73
SgceO70258 Gm23171-201ENSMUST00000157159 264 ntBASIC4.22□□□□□ -1.73
SgceO70258 Gm22378-201ENSMUST00000157481 111 ntBASIC4.22□□□□□ -1.73
SgceO70258 Gm28061-201ENSMUST00000189085 807 ntBASIC4.22□□□□□ -1.73
SgceO70258 Gm5511-201ENSMUST00000189380 802 ntBASIC4.22□□□□□ -1.73
SgceO70258 Gm28389-201ENSMUST00000190090 697 ntBASIC4.22□□□□□ -1.73
SgceO70258 Gm32950-201ENSMUST00000193336 232 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SgceO70258 Gm43144-201ENSMUST00000198256 485 ntBASIC4.22□□□□□ -1.73
SgceO70258 Gm43136-201ENSMUST00000200403 636 ntBASIC4.22□□□□□ -1.73
SgceO70258 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC4.22□□□□□ -1.73
SgceO70258 Gm3816-201ENSMUST00000209803 433 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 86.5 ms