Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Hmgb3O54879 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC3.72□□□□□ -1.81
Hmgb3O54879 Gm12753-201ENSMUST00000152086 653 ntTSL 3 BASIC3.72□□□□□ -1.81
Hmgb3O54879 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC3.72□□□□□ -1.81
Hmgb3O54879 Gm22725-201ENSMUST00000158092 110 ntBASIC3.72□□□□□ -1.81
Hmgb3O54879 Tppp2-202ENSMUST00000177625 627 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
Hmgb3O54879 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC3.72□□□□□ -1.81
Hmgb3O54879 Gm4557-201ENSMUST00000185826 907 ntBASIC3.72□□□□□ -1.81
Hmgb3O54879 Gm19585-201ENSMUST00000186007 587 ntTSL 2 BASIC3.72□□□□□ -1.81
Hmgb3O54879 Gm4526-201ENSMUST00000186039 920 ntBASIC3.72□□□□□ -1.81
Hmgb3O54879 Gm28083-201ENSMUST00000186533 538 ntTSL 5 BASIC3.72□□□□□ -1.81
Hmgb3O54879 Gm8708-201ENSMUST00000188500 906 ntBASIC3.72□□□□□ -1.81
Hmgb3O54879 1700113H08Rik-203ENSMUST00000189775 798 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Hmgb3O54879 Gm28500-201ENSMUST00000190286 151 ntBASIC3.72□□□□□ -1.81
Hmgb3O54879 Gm37401-201ENSMUST00000192053 347 ntTSL 5 BASIC3.72□□□□□ -1.81
Hmgb3O54879 Gm38097-201ENSMUST00000192936 439 ntBASIC3.72□□□□□ -1.81
Hmgb3O54879 Gm6074-201ENSMUST00000193340 451 ntBASIC3.72□□□□□ -1.81
Hmgb3O54879 Ighv1-44-201ENSMUST00000195597 352 ntBASIC3.72□□□□□ -1.81
Hmgb3O54879 Gm30043-201ENSMUST00000196689 733 ntTSL 2 BASIC3.72□□□□□ -1.81
Hmgb3O54879 Gm43941-201ENSMUST00000203303 1073 ntBASIC3.72□□□□□ -1.81
Hmgb3O54879 Gm18215-201ENSMUST00000204429 798 ntBASIC3.72□□□□□ -1.81
Hmgb3O54879 Gm18468-201ENSMUST00000207321 369 ntBASIC3.72□□□□□ -1.81
Hmgb3O54879 Gm18470-201ENSMUST00000207467 420 ntBASIC3.72□□□□□ -1.81
Hmgb3O54879 Gm18465-201ENSMUST00000207468 369 ntBASIC3.72□□□□□ -1.81
Hmgb3O54879 Gm18464-201ENSMUST00000207803 420 ntBASIC3.72□□□□□ -1.81
Hmgb3O54879 Gm18458-201ENSMUST00000207908 369 ntBASIC3.72□□□□□ -1.81
Hmgb3O54879 Gm18461-201ENSMUST00000208421 420 ntBASIC3.72□□□□□ -1.81
Hmgb3O54879 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC3.72□□□□□ -1.81
Hmgb3O54879 4930543I11Rik-201ENSMUST00000219006 959 ntBASIC3.72□□□□□ -1.81
Hmgb3O54879 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC3.72□□□□□ -1.81
Hmgb3O54879 Gm7822-201ENSMUST00000222433 581 ntBASIC3.72□□□□□ -1.81
Hmgb3O54879 Gm7768-201ENSMUST00000222988 597 ntBASIC3.72□□□□□ -1.81
Hmgb3O54879 Gm7040-201ENSMUST00000223271 443 ntBASIC3.72□□□□□ -1.81
Hmgb3O54879 AC154371.1-201ENSMUST00000226600 412 ntBASIC3.72□□□□□ -1.81
Hmgb3O54879 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Hmgb3O54879 AC123665.6-201ENSMUST00000228568 538 ntBASIC3.72□□□□□ -1.81
Hmgb3O54879 Olfr670-201ENSMUST00000050482 939 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Hmgb3O54879 Snora44-201ENSMUST00000082670 129 ntBASIC3.72□□□□□ -1.81
Hmgb3O54879 Gm26163-201ENSMUST00000083792 178 ntBASIC3.72□□□□□ -1.81
Hmgb3O54879 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Hmgb3O54879 Gm9386-201ENSMUST00000095195 381 ntBASIC3.72□□□□□ -1.81
Hmgb3O54879 Defb26-201ENSMUST00000099205 561 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Hmgb3O54879 Olfr1314-201ENSMUST00000099598 939 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Hmgb3O54879 AC156025.1-201ENSMUST00000223597 3551 ntBASIC3.72□□□□□ -1.81
Hmgb3O54879 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC3.72□□□□□ -1.81
Hmgb3O54879 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Hmgb3O54879 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Hmgb3O54879 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Hmgb3O54879 Peli1-202ENSMUST00000101477 3703 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Hmgb3O54879 Gm43327-201ENSMUST00000199285 4055 ntBASIC3.72□□□□□ -1.81
Hmgb3O54879 AC168056.3-201ENSMUST00000225395 2540 ntBASIC3.72□□□□□ -1.81
Hmgb3O54879 Gm45137-201ENSMUST00000208652 4415 ntBASIC3.71□□□□□ -1.81
Hmgb3O54879 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Hmgb3O54879 Kynu-202ENSMUST00000050511 2778 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Hmgb3O54879 Olfr826-203ENSMUST00000216661 2858 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
Hmgb3O54879 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Hmgb3O54879 Gm43826-201ENSMUST00000199604 2612 ntBASIC3.71□□□□□ -1.82
Hmgb3O54879 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC3.71□□□□□ -1.82
Hmgb3O54879 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Hmgb3O54879 Gm12571-201ENSMUST00000118132 243 ntBASIC3.71□□□□□ -1.82
Hmgb3O54879 Gm15361-201ENSMUST00000119320 444 ntBASIC3.71□□□□□ -1.82
Hmgb3O54879 Pdcl2-202ENSMUST00000122213 1049 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Hmgb3O54879 Gm25106-201ENSMUST00000122672 134 ntBASIC3.71□□□□□ -1.82
Hmgb3O54879 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC3.71□□□□□ -1.82
Hmgb3O54879 Gm23960-201ENSMUST00000157206 131 ntBASIC3.71□□□□□ -1.82
Hmgb3O54879 Gm23673-201ENSMUST00000157474 298 ntBASIC3.71□□□□□ -1.82
Hmgb3O54879 Gm17081-201ENSMUST00000167363 478 ntBASIC3.71□□□□□ -1.82
Hmgb3O54879 Rab26os-201ENSMUST00000176215 477 ntBASIC3.71□□□□□ -1.82
Hmgb3O54879 Gm27024-201ENSMUST00000182561 755 ntBASIC3.71□□□□□ -1.82
Hmgb3O54879 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC3.71□□□□□ -1.82
Hmgb3O54879 Gm27457-201ENSMUST00000184771 156 ntBASIC3.71□□□□□ -1.82
Hmgb3O54879 Mocs2-217ENSMUST00000184781 1250 ntTSL 5 BASIC3.71□□□□□ -1.82
Hmgb3O54879 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC3.71□□□□□ -1.82
Hmgb3O54879 Gm28097-201ENSMUST00000187333 366 ntBASIC3.71□□□□□ -1.82
Hmgb3O54879 1700052I22Rik-201ENSMUST00000190431 379 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Hmgb3O54879 Gm37837-201ENSMUST00000191743 604 ntBASIC3.71□□□□□ -1.82
Hmgb3O54879 Gm38131-201ENSMUST00000192449 430 ntBASIC3.71□□□□□ -1.82
Hmgb3O54879 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC3.71□□□□□ -1.82
Hmgb3O54879 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Hmgb3O54879 Gm42619-201ENSMUST00000197564 1136 ntBASIC3.71□□□□□ -1.82
Hmgb3O54879 A230098N10Rik-202ENSMUST00000200055 356 ntTSL 2 BASIC3.71□□□□□ -1.82
Hmgb3O54879 Gm45777-201ENSMUST00000213009 301 ntBASIC3.71□□□□□ -1.82
Hmgb3O54879 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Hmgb3O54879 Olfr931-ps1-201ENSMUST00000214941 549 ntBASIC3.71□□□□□ -1.82
Hmgb3O54879 H60c-203ENSMUST00000216211 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
Hmgb3O54879 CT009713.4-201ENSMUST00000224246 272 ntBASIC3.71□□□□□ -1.82
Hmgb3O54879 AC154576.1-201ENSMUST00000225864 563 ntBASIC3.71□□□□□ -1.82
Hmgb3O54879 Olfr906-201ENSMUST00000045493 936 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Hmgb3O54879 Olfr1202-201ENSMUST00000072057 930 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Hmgb3O54879 Gm24207-201ENSMUST00000082781 108 ntBASIC3.71□□□□□ -1.82
Hmgb3O54879 Gm24706-201ENSMUST00000082806 137 ntBASIC3.71□□□□□ -1.82
Hmgb3O54879 Gm10221-201ENSMUST00000088299 309 ntBASIC3.71□□□□□ -1.82
Hmgb3O54879 Olfr1281-201ENSMUST00000090326 918 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Hmgb3O54879 Olfr599-201ENSMUST00000098201 1050 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Hmgb3O54879 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
Hmgb3O54879 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Hmgb3O54879 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Hmgb3O54879 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Hmgb3O54879 Gm10997-201ENSMUST00000210294 1500 ntBASIC3.7□□□□□ -1.82
Hmgb3O54879 Olfr203-202ENSMUST00000215893 1521 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms