Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Cacna1d-209ENSMUST00000224785 8041 ntAPPRIS ALT2 BASIC2.58□□□□□ -2
Herc1E9PZP8 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC2.58□□□□□ -2
Herc1E9PZP8 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
Herc1E9PZP8 Gm37749-201ENSMUST00000193917 1899 ntBASIC2.58□□□□□ -2
Herc1E9PZP8 CT025710.1-201ENSMUST00000222949 2533 ntBASIC2.58□□□□□ -2
Herc1E9PZP8 Gm5084-202ENSMUST00000224064 3609 ntBASIC2.58□□□□□ -2
Herc1E9PZP8 Osbpl3-204ENSMUST00000114468 6494 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
Herc1E9PZP8 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC2.58□□□□□ -2
Herc1E9PZP8 Rif1-201ENSMUST00000112693 8509 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Herc1E9PZP8 Gen1-201ENSMUST00000166117 5268 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Herc1E9PZP8 Gm45211-201ENSMUST00000206208 2650 ntBASIC2.58□□□□□ -2
Herc1E9PZP8 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC2.58□□□□□ -2
Herc1E9PZP8 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Herc1E9PZP8 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC2.58□□□□□ -2
Herc1E9PZP8 Gm16216-201ENSMUST00000118970 1111 ntBASIC2.58□□□□□ -2
Herc1E9PZP8 Gm14619-201ENSMUST00000120480 168 ntBASIC2.58□□□□□ -2
Herc1E9PZP8 Gm22453-201ENSMUST00000122801 318 ntBASIC2.58□□□□□ -2
Herc1E9PZP8 Gm15522-201ENSMUST00000134467 785 ntTSL 1 (best) BASIC2.58□□□□□ -2
Herc1E9PZP8 Mir6916-201ENSMUST00000184514 63 ntBASIC2.58□□□□□ -2
Herc1E9PZP8 A430093F15Rik-206ENSMUST00000189565 651 ntTSL 3 BASIC2.58□□□□□ -2
Herc1E9PZP8 Gm45245-201ENSMUST00000210082 376 ntBASIC2.58□□□□□ -2
Herc1E9PZP8 AC125223.1-203ENSMUST00000225304 498 ntBASIC2.58□□□□□ -2
Herc1E9PZP8 AC140451.2-202ENSMUST00000226156 574 ntBASIC2.58□□□□□ -2
Herc1E9PZP8 Kcnma1-201ENSMUST00000065788 4524 ntTSL 5 BASIC2.58□□□□□ -2
Herc1E9PZP8 Olfr60-205ENSMUST00000216027 3300 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Herc1E9PZP8 D030045P18Rik-201ENSMUST00000213245 1892 ntTSL 1 (best) BASIC2.58□□□□□ -2
Herc1E9PZP8 Aftph-205ENSMUST00000146722 3763 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
Herc1E9PZP8 4930421C12Rik-201ENSMUST00000200814 1574 ntBASIC2.58□□□□□ -2
Herc1E9PZP8 Olfr893-202ENSMUST00000211975 2924 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
Herc1E9PZP8 Gm22674-201ENSMUST00000104413 131 ntBASIC2.58□□□□□ -2
Herc1E9PZP8 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC2.58□□□□□ -2
Herc1E9PZP8 Zgrf1-202ENSMUST00000195955 3804 ntTSL 2 BASIC2.58□□□□□ -2
Herc1E9PZP8 AC122905.1-201ENSMUST00000218181 456 ntTSL 5 BASIC2.58□□□□□ -2
Herc1E9PZP8 AC160756.1-201ENSMUST00000227266 235 ntBASIC2.58□□□□□ -2
Herc1E9PZP8 Vdac3-ps1-201ENSMUST00000099736 853 ntBASIC2.58□□□□□ -2
Herc1E9PZP8 AC139758.3-201ENSMUST00000226853 2704 ntBASIC2.58□□□□□ -2
Herc1E9PZP8 Spen-202ENSMUST00000105786 12299 ntAPPRIS P3 TSL 5 BASIC2.58□□□□□ -2
Herc1E9PZP8 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Herc1E9PZP8 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC2.58□□□□□ -2
Herc1E9PZP8 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Herc1E9PZP8 Gm43766-201ENSMUST00000200590 5417 ntBASIC2.57□□□□□ -2
Herc1E9PZP8 Rpgrip1l-201ENSMUST00000047783 7009 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Herc1E9PZP8 Cpeb4-202ENSMUST00000109412 6303 ntAPPRIS ALT1 TSL 5 BASIC2.57□□□□□ -2
Herc1E9PZP8 Il18r1-202ENSMUST00000108044 4158 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Herc1E9PZP8 Plch1-213ENSMUST00000177143 6010 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
Herc1E9PZP8 Olfr782-202ENSMUST00000213970 1944 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Herc1E9PZP8 Ttc41-202ENSMUST00000075632 4366 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
Herc1E9PZP8 Gm37913-201ENSMUST00000192925 2544 ntBASIC2.57□□□□□ -2
Herc1E9PZP8 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC2.57□□□□□ -2
Herc1E9PZP8 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC2.57□□□□□ -2
Herc1E9PZP8 Gm23609-201ENSMUST00000104542 127 ntBASIC2.57□□□□□ -2
Herc1E9PZP8 Gm10241-201ENSMUST00000117664 286 ntBASIC2.57□□□□□ -2
Herc1E9PZP8 Gm13690-201ENSMUST00000118989 285 ntBASIC2.57□□□□□ -2
Herc1E9PZP8 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC2.57□□□□□ -2
Herc1E9PZP8 Gm13905-201ENSMUST00000140009 579 ntTSL 3 BASIC2.57□□□□□ -2
Herc1E9PZP8 2510017J16Rik-201ENSMUST00000198718 1263 ntBASIC2.57□□□□□ -2
Herc1E9PZP8 AC137127.3-201ENSMUST00000213340 349 ntBASIC2.57□□□□□ -2
Herc1E9PZP8 AC122305.2-201ENSMUST00000215148 834 ntBASIC2.57□□□□□ -2
Herc1E9PZP8 Gm3338-201ENSMUST00000220982 269 ntBASIC2.57□□□□□ -2
Herc1E9PZP8 Gm43312-201ENSMUST00000201655 2466 ntBASIC2.57□□□□□ -2
Herc1E9PZP8 Abcb5-201ENSMUST00000035515 3876 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Herc1E9PZP8 Vmn2r-ps119-201ENSMUST00000177481 2406 ntBASIC2.57□□□□□ -2
Herc1E9PZP8 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Herc1E9PZP8 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC2.57□□□□□ -2
Herc1E9PZP8 Gm45762-201ENSMUST00000212863 2619 ntBASIC2.57□□□□□ -2
Herc1E9PZP8 1110002E22Rik-201ENSMUST00000163080 9741 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Herc1E9PZP8 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC2.57□□□□□ -2
Herc1E9PZP8 Veph1-201ENSMUST00000029419 6431 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Herc1E9PZP8 Depdc5-204ENSMUST00000119705 7929 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
Herc1E9PZP8 Olfr427-202ENSMUST00000213832 3866 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Herc1E9PZP8 Il5ra-203ENSMUST00000205004 2271 ntTSL 1 (best) BASIC2.57□□□□□ -2
Herc1E9PZP8 Gm22498-201ENSMUST00000104497 86 ntBASIC2.57□□□□□ -2
Herc1E9PZP8 Cep112-203ENSMUST00000106718 839 ntTSL 5 BASIC2.57□□□□□ -2
Herc1E9PZP8 Gm11673-201ENSMUST00000117846 331 ntBASIC2.57□□□□□ -2
Herc1E9PZP8 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC2.57□□□□□ -2
Herc1E9PZP8 Mir1934-201ENSMUST00000158127 83 ntBASIC2.57□□□□□ -2
Herc1E9PZP8 Mir5118-201ENSMUST00000175551 67 ntBASIC2.57□□□□□ -2
Herc1E9PZP8 Olfr915-201ENSMUST00000215191 933 ntAPPRIS P1 BASIC2.57□□□□□ -2
Herc1E9PZP8 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC2.57□□□□□ -2
Herc1E9PZP8 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC2.57□□□□□ -2
Herc1E9PZP8 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
Herc1E9PZP8 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Herc1E9PZP8 CT025675.1-201ENSMUST00000228171 1567 ntBASIC2.57□□□□□ -2
Herc1E9PZP8 N4bp2-204ENSMUST00000201489 9055 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Herc1E9PZP8 Nlrp10-201ENSMUST00000055745 4504 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Herc1E9PZP8 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Herc1E9PZP8 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC2.57□□□□□ -2
Herc1E9PZP8 Gm43210-201ENSMUST00000196743 6152 ntBASIC2.57□□□□□ -2
Herc1E9PZP8 Gm24235-201ENSMUST00000104319 129 ntBASIC2.57□□□□□ -2
Herc1E9PZP8 Gm13761-201ENSMUST00000117238 807 ntBASIC2.57□□□□□ -2
Herc1E9PZP8 Gm15268-201ENSMUST00000118845 352 ntBASIC2.57□□□□□ -2
Herc1E9PZP8 Gm43853-201ENSMUST00000197162 301 ntBASIC2.57□□□□□ -2
Herc1E9PZP8 Gm44118-201ENSMUST00000204665 229 ntBASIC2.57□□□□□ -2
Herc1E9PZP8 4930469K13Rik-202ENSMUST00000223852 537 ntAPPRIS P5 BASIC2.57□□□□□ -2
Herc1E9PZP8 AC131747.1-201ENSMUST00000226159 793 ntBASIC2.57□□□□□ -2
Herc1E9PZP8 Gm6177-201ENSMUST00000085589 465 ntBASIC2.57□□□□□ -2
Herc1E9PZP8 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC2.57□□□□□ -2
Herc1E9PZP8 Zbbx-201ENSMUST00000039269 2399 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
Herc1E9PZP8 Abca5-201ENSMUST00000043961 8231 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Herc1E9PZP8 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 93.8 ms