Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gm37140-201ENSMUST00000192914 1684 ntBASIC5.07□□□□□ -1.6
Scn3aA2ASI5 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Scn3aA2ASI5 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC5.07□□□□□ -1.6
Scn3aA2ASI5 Gm44582-201ENSMUST00000209125 445 ntBASIC5.07□□□□□ -1.6
Scn3aA2ASI5 Gm8556-201ENSMUST00000210437 664 ntBASIC5.07□□□□□ -1.6
Scn3aA2ASI5 Olfr1496-203ENSMUST00000219412 1067 ntAPPRIS P2 BASIC5.07□□□□□ -1.6
Scn3aA2ASI5 Olfr1496-201ENSMUST00000057390 1067 ntAPPRIS ALT1 BASIC5.07□□□□□ -1.6
Scn3aA2ASI5 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Scn3aA2ASI5 Vaultrc5-201ENSMUST00000083211 143 ntBASIC5.07□□□□□ -1.6
Scn3aA2ASI5 Olfr834-201ENSMUST00000086492 939 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Scn3aA2ASI5 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Scn3aA2ASI5 Olfr1216-201ENSMUST00000099800 936 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Scn3aA2ASI5 Olfr2-205ENSMUST00000214105 5798 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Scn3aA2ASI5 Zfp644-201ENSMUST00000045466 5569 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Scn3aA2ASI5 Zfyve9-203ENSMUST00000106658 5987 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Scn3aA2ASI5 AC163032.1-201ENSMUST00000220671 2970 ntBASIC5.06□□□□□ -1.6
Scn3aA2ASI5 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Scn3aA2ASI5 Gm37964-201ENSMUST00000192459 4905 ntBASIC5.06□□□□□ -1.6
Scn3aA2ASI5 Rtl9-201ENSMUST00000165829 4104 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Scn3aA2ASI5 Gm43696-201ENSMUST00000199385 6071 ntBASIC5.06□□□□□ -1.6
Scn3aA2ASI5 Fcrl5-201ENSMUST00000049926 1791 ntAPPRIS P4 TSL 5 BASIC5.06□□□□□ -1.6
Scn3aA2ASI5 Gm14067-201ENSMUST00000119340 314 ntBASIC5.06□□□□□ -1.6
Scn3aA2ASI5 Gm22601-201ENSMUST00000157595 250 ntBASIC5.06□□□□□ -1.6
Scn3aA2ASI5 Gm1992-201ENSMUST00000161581 250 ntTSL 3 BASIC5.06□□□□□ -1.6
Scn3aA2ASI5 Gm1979-202ENSMUST00000170224 666 ntTSL 5 BASIC5.06□□□□□ -1.6
Scn3aA2ASI5 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Scn3aA2ASI5 Gm21698-201ENSMUST00000178487 666 ntTSL 5 BASIC5.06□□□□□ -1.6
Scn3aA2ASI5 Gm21971-201ENSMUST00000180187 337 ntTSL 5 BASIC5.06□□□□□ -1.6
Scn3aA2ASI5 Gm6802-202ENSMUST00000186566 126 ntBASIC5.06□□□□□ -1.6
Scn3aA2ASI5 Gm28709-201ENSMUST00000186967 456 ntTSL 5 BASIC5.06□□□□□ -1.6
Scn3aA2ASI5 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC5.06□□□□□ -1.6
Scn3aA2ASI5 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Scn3aA2ASI5 Gm23464-201ENSMUST00000083145 147 ntBASIC5.06□□□□□ -1.6
Scn3aA2ASI5 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Scn3aA2ASI5 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
Scn3aA2ASI5 AC153964.1-201ENSMUST00000219677 3142 ntBASIC5.06□□□□□ -1.6
Scn3aA2ASI5 Gm10723-201ENSMUST00000195366 6918 ntBASIC5.06□□□□□ -1.6
Scn3aA2ASI5 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Scn3aA2ASI5 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Scn3aA2ASI5 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Scn3aA2ASI5 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
Scn3aA2ASI5 Olfr655-203ENSMUST00000215538 2012 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Scn3aA2ASI5 Olfr655-204ENSMUST00000216750 2010 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Scn3aA2ASI5 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC5.05□□□□□ -1.6
Scn3aA2ASI5 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Scn3aA2ASI5 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC5.05□□□□□ -1.6
Scn3aA2ASI5 Gm26367-201ENSMUST00000104165 132 ntBASIC5.05□□□□□ -1.6
Scn3aA2ASI5 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Scn3aA2ASI5 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC5.05□□□□□ -1.6
Scn3aA2ASI5 Gm12724-201ENSMUST00000140196 665 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Scn3aA2ASI5 Gm27896-201ENSMUST00000175162 317 ntBASIC5.05□□□□□ -1.6
Scn3aA2ASI5 Il20-202ENSMUST00000188581 465 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Scn3aA2ASI5 Gm5339-201ENSMUST00000210551 1102 ntBASIC5.05□□□□□ -1.6
Scn3aA2ASI5 Olfr529-ps1-201ENSMUST00000211097 928 ntBASIC5.05□□□□□ -1.6
Scn3aA2ASI5 Olfr1119-ps1-201ENSMUST00000215282 634 ntBASIC5.05□□□□□ -1.6
Scn3aA2ASI5 AC132433.1-201ENSMUST00000221553 1101 ntBASIC5.05□□□□□ -1.6
Scn3aA2ASI5 AC163631.1-201ENSMUST00000225041 598 ntBASIC5.05□□□□□ -1.6
Scn3aA2ASI5 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC5.05□□□□□ -1.6
Scn3aA2ASI5 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Scn3aA2ASI5 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Scn3aA2ASI5 Vmn1r31-205ENSMUST00000228586 2115 ntAPPRIS P2 BASIC5.05□□□□□ -1.6
Scn3aA2ASI5 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Scn3aA2ASI5 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Scn3aA2ASI5 Gm20667-201ENSMUST00000175674 1930 ntBASIC5.05□□□□□ -1.6
Scn3aA2ASI5 Gm23746-201ENSMUST00000104229 125 ntBASIC5.05□□□□□ -1.6
Scn3aA2ASI5 Gm15076-201ENSMUST00000117076 474 ntBASIC5.05□□□□□ -1.6
Scn3aA2ASI5 Gm14753-201ENSMUST00000118503 246 ntBASIC5.05□□□□□ -1.6
Scn3aA2ASI5 Olfr360-201ENSMUST00000120704 954 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Scn3aA2ASI5 Gm14908-201ENSMUST00000120930 1286 ntBASIC5.05□□□□□ -1.6
Scn3aA2ASI5 Gm13000-201ENSMUST00000120937 496 ntBASIC5.05□□□□□ -1.6
Scn3aA2ASI5 Gm15075-201ENSMUST00000122187 477 ntBASIC5.05□□□□□ -1.6
Scn3aA2ASI5 Gm24636-201ENSMUST00000158673 288 ntBASIC5.05□□□□□ -1.6
Scn3aA2ASI5 Gm5660-201ENSMUST00000197453 1149 ntBASIC5.05□□□□□ -1.6
Scn3aA2ASI5 Gm17811-201ENSMUST00000206193 387 ntBASIC5.05□□□□□ -1.6
Scn3aA2ASI5 Gm21885-202ENSMUST00000208510 775 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Scn3aA2ASI5 Olfr556-202ENSMUST00000213485 3825 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Scn3aA2ASI5 Adam26b-201ENSMUST00000080135 2476 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Scn3aA2ASI5 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Scn3aA2ASI5 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Scn3aA2ASI5 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Scn3aA2ASI5 Syt14-205ENSMUST00000215093 9274 ntTSL 5 BASIC5.04□□□□□ -1.6
Scn3aA2ASI5 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC5.04□□□□□ -1.6
Scn3aA2ASI5 AC129085.3-201ENSMUST00000225686 1705 ntBASIC5.04□□□□□ -1.6
Scn3aA2ASI5 Olfr145-201ENSMUST00000086062 6796 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Scn3aA2ASI5 Gm37733-201ENSMUST00000195478 2962 ntBASIC5.04□□□□□ -1.6
Scn3aA2ASI5 Gm12062-201ENSMUST00000117533 259 ntBASIC5.04□□□□□ -1.6
Scn3aA2ASI5 Gm5379-201ENSMUST00000120973 826 ntBASIC5.04□□□□□ -1.6
Scn3aA2ASI5 Gm14603-201ENSMUST00000121275 448 ntBASIC5.04□□□□□ -1.6
Scn3aA2ASI5 Gm12340-201ENSMUST00000121617 462 ntBASIC5.04□□□□□ -1.6
Scn3aA2ASI5 Gm27414-201ENSMUST00000185033 381 ntBASIC5.04□□□□□ -1.6
Scn3aA2ASI5 Gm4322-201ENSMUST00000191094 336 ntBASIC5.04□□□□□ -1.6
Scn3aA2ASI5 Gm43604-201ENSMUST00000199799 705 ntBASIC5.04□□□□□ -1.6
Scn3aA2ASI5 Gm45593-201ENSMUST00000211415 752 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Scn3aA2ASI5 Olfr879-ps1-201ENSMUST00000212455 694 ntBASIC5.04□□□□□ -1.6
Scn3aA2ASI5 AC159622.1-201ENSMUST00000221004 554 ntBASIC5.04□□□□□ -1.6
Scn3aA2ASI5 AC132315.1-201ENSMUST00000221771 390 ntBASIC5.04□□□□□ -1.6
Scn3aA2ASI5 3830408C21Rik-203ENSMUST00000224293 822 ntBASIC5.04□□□□□ -1.6
Scn3aA2ASI5 Olfr957-201ENSMUST00000051653 936 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Scn3aA2ASI5 Olfr1507-203ENSMUST00000206062 2803 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
Scn3aA2ASI5 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms