Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
Cdc40Q9DC48 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Cdc40Q9DC48 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Cdc40Q9DC48 Serpinb6c-201ENSMUST00000110273 1325 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Cdc40Q9DC48 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
Cdc40Q9DC48 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
Cdc40Q9DC48 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
Cdc40Q9DC48 Olfr695-201ENSMUST00000216868 3953 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Cdc40Q9DC48 Olfr1440-205ENSMUST00000216145 7542 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Cdc40Q9DC48 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Cdc40Q9DC48 Gm14655-201ENSMUST00000120124 578 ntBASIC4.49□□□□□ -1.69
Cdc40Q9DC48 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC4.49□□□□□ -1.69
Cdc40Q9DC48 Rrm2b-203ENSMUST00000137636 900 ntTSL 5 BASIC4.49□□□□□ -1.69
Cdc40Q9DC48 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC4.49□□□□□ -1.69
Cdc40Q9DC48 Gm5777-201ENSMUST00000177265 448 ntBASIC4.49□□□□□ -1.69
Cdc40Q9DC48 Mir6963-201ENSMUST00000183535 71 ntBASIC4.49□□□□□ -1.69
Cdc40Q9DC48 9130024F11Rik-203ENSMUST00000187858 447 ntTSL 2 BASIC4.49□□□□□ -1.69
Cdc40Q9DC48 Gm29036-201ENSMUST00000189967 877 ntBASIC4.49□□□□□ -1.69
Cdc40Q9DC48 Gm29332-201ENSMUST00000190829 227 ntBASIC4.49□□□□□ -1.69
Cdc40Q9DC48 Gm20203-201ENSMUST00000192352 332 ntBASIC4.49□□□□□ -1.69
Cdc40Q9DC48 4930540E01Rik-201ENSMUST00000192569 1146 ntBASIC4.49□□□□□ -1.69
Cdc40Q9DC48 Gm42579-201ENSMUST00000200512 734 ntBASIC4.49□□□□□ -1.69
Cdc40Q9DC48 Gm43036-201ENSMUST00000200594 373 ntBASIC4.49□□□□□ -1.69
Cdc40Q9DC48 Gm42458-201ENSMUST00000201914 369 ntBASIC4.49□□□□□ -1.69
Cdc40Q9DC48 Gm32308-201ENSMUST00000203053 280 ntBASIC4.49□□□□□ -1.69
Cdc40Q9DC48 Gm38843-201ENSMUST00000209189 323 ntTSL 5 BASIC4.49□□□□□ -1.69
Cdc40Q9DC48 Gm8189-203ENSMUST00000211159 1225 ntBASIC4.49□□□□□ -1.69
Cdc40Q9DC48 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Cdc40Q9DC48 AC163621.2-201ENSMUST00000222229 682 ntBASIC4.49□□□□□ -1.69
Cdc40Q9DC48 Gm7822-201ENSMUST00000222433 581 ntBASIC4.49□□□□□ -1.69
Cdc40Q9DC48 AC131745.1-201ENSMUST00000223660 330 ntBASIC4.49□□□□□ -1.69
Cdc40Q9DC48 AC154527.3-201ENSMUST00000225519 989 ntBASIC4.49□□□□□ -1.69
Cdc40Q9DC48 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Cdc40Q9DC48 Mucl2-202ENSMUST00000226584 823 ntAPPRIS ALT2 BASIC4.49□□□□□ -1.69
Cdc40Q9DC48 Serpinb9d-201ENSMUST00000067198 1250 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Cdc40Q9DC48 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Cdc40Q9DC48 Gm43266-201ENSMUST00000201049 1771 ntBASIC4.49□□□□□ -1.69
Cdc40Q9DC48 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Cdc40Q9DC48 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Cdc40Q9DC48 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Cdc40Q9DC48 AC122382.2-201ENSMUST00000225128 3602 ntBASIC4.49□□□□□ -1.69
Cdc40Q9DC48 Gm26753-201ENSMUST00000181938 2731 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Cdc40Q9DC48 Gm43312-201ENSMUST00000201655 2466 ntBASIC4.49□□□□□ -1.69
Cdc40Q9DC48 Gm44433-201ENSMUST00000203540 4832 ntBASIC4.49□□□□□ -1.69
Cdc40Q9DC48 Gm45129-201ENSMUST00000208444 2224 ntBASIC4.49□□□□□ -1.69
Cdc40Q9DC48 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Cdc40Q9DC48 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Cdc40Q9DC48 Clec2e-201ENSMUST00000032258 2099 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Cdc40Q9DC48 5730408A14Rik-201ENSMUST00000194955 1824 ntBASIC4.49□□□□□ -1.69
Cdc40Q9DC48 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC4.49□□□□□ -1.69
Cdc40Q9DC48 CT009696.3-201ENSMUST00000215342 2184 ntTSL 3 BASIC4.48□□□□□ -1.69
Cdc40Q9DC48 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Cdc40Q9DC48 Clk4-202ENSMUST00000109111 1427 ntTSL 2 BASIC4.48□□□□□ -1.69
Cdc40Q9DC48 Casp4-201ENSMUST00000027012 1435 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Cdc40Q9DC48 Olfr615-202ENSMUST00000214345 3403 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Cdc40Q9DC48 Cmah-202ENSMUST00000110391 9789 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Cdc40Q9DC48 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
Cdc40Q9DC48 Gm23948-201ENSMUST00000104030 132 ntBASIC4.48□□□□□ -1.69
Cdc40Q9DC48 Gm12328-201ENSMUST00000118611 197 ntBASIC4.48□□□□□ -1.69
Cdc40Q9DC48 Gm15012-201ENSMUST00000119176 106 ntBASIC4.48□□□□□ -1.69
Cdc40Q9DC48 Gm12704-201ENSMUST00000119789 464 ntBASIC4.48□□□□□ -1.69
Cdc40Q9DC48 Gm14369-201ENSMUST00000121355 285 ntBASIC4.48□□□□□ -1.69
Cdc40Q9DC48 Gm568-201ENSMUST00000135777 506 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Cdc40Q9DC48 Gm24690-201ENSMUST00000157759 97 ntBASIC4.48□□□□□ -1.69
Cdc40Q9DC48 Gm24217-201ENSMUST00000158260 133 ntBASIC4.48□□□□□ -1.69
Cdc40Q9DC48 Gm23046-201ENSMUST00000158369 284 ntBASIC4.48□□□□□ -1.69
Cdc40Q9DC48 Airn-203ENSMUST00000159791 485 ntTSL 3 BASIC4.48□□□□□ -1.69
Cdc40Q9DC48 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC4.48□□□□□ -1.69
Cdc40Q9DC48 Tex50-202ENSMUST00000178511 954 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
Cdc40Q9DC48 Mir6416-201ENSMUST00000183664 117 ntBASIC4.48□□□□□ -1.69
Cdc40Q9DC48 Gm29148-201ENSMUST00000188140 336 ntBASIC4.48□□□□□ -1.69
Cdc40Q9DC48 Gm18150-201ENSMUST00000195341 645 ntBASIC4.48□□□□□ -1.69
Cdc40Q9DC48 Gm37614-201ENSMUST00000195645 210 ntBASIC4.48□□□□□ -1.69
Cdc40Q9DC48 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC4.48□□□□□ -1.69
Cdc40Q9DC48 Gm6719-201ENSMUST00000202067 335 ntBASIC4.48□□□□□ -1.69
Cdc40Q9DC48 Gm43968-201ENSMUST00000203388 389 ntBASIC4.48□□□□□ -1.69
Cdc40Q9DC48 Snhg1-207ENSMUST00000205909 709 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Cdc40Q9DC48 Gm44648-201ENSMUST00000208267 329 ntBASIC4.48□□□□□ -1.69
Cdc40Q9DC48 Gm44761-201ENSMUST00000209080 440 ntTSL 2 BASIC4.48□□□□□ -1.69
Cdc40Q9DC48 AC161256.1-201ENSMUST00000217312 213 ntBASIC4.48□□□□□ -1.69
Cdc40Q9DC48 AC131720.3-201ENSMUST00000219113 275 ntBASIC4.48□□□□□ -1.69
Cdc40Q9DC48 AC154657.1-201ENSMUST00000226394 775 ntBASIC4.48□□□□□ -1.69
Cdc40Q9DC48 AC112142.1-206ENSMUST00000228136 982 ntBASIC4.48□□□□□ -1.69
Cdc40Q9DC48 Prl2a1-201ENSMUST00000023602 884 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Cdc40Q9DC48 Gm22220-201ENSMUST00000082671 149 ntBASIC4.48□□□□□ -1.69
Cdc40Q9DC48 Vmn1r55-201ENSMUST00000098844 1284 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Cdc40Q9DC48 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Cdc40Q9DC48 Olfr1406-203ENSMUST00000215878 3149 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Cdc40Q9DC48 AC139218.1-201ENSMUST00000228215 4287 ntBASIC4.48□□□□□ -1.69
Cdc40Q9DC48 Vmn2r-ps42-201ENSMUST00000174123 2083 ntBASIC4.48□□□□□ -1.69
Cdc40Q9DC48 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Cdc40Q9DC48 Gm15624-203ENSMUST00000204811 3402 ntBASIC4.48□□□□□ -1.69
Cdc40Q9DC48 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Cdc40Q9DC48 Olfr1123-203ENSMUST00000216208 5245 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
Cdc40Q9DC48 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Cdc40Q9DC48 Gm37250-201ENSMUST00000194919 2388 ntBASIC4.48□□□□□ -1.69
Cdc40Q9DC48 Olfr1440-208ENSMUST00000217062 7484 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
Cdc40Q9DC48 Dmd-201ENSMUST00000113991 4438 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Cdc40Q9DC48 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
Cdc40Q9DC48 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms