Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC5.46□□□□□ -1.54
Smc1aQ9CU62 Gm27044-201ENSMUST00000183033 796 ntBASIC5.46□□□□□ -1.54
Smc1aQ9CU62 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC5.46□□□□□ -1.54
Smc1aQ9CU62 Gm42720-201ENSMUST00000196813 300 ntBASIC5.46□□□□□ -1.54
Smc1aQ9CU62 Csn2-209ENSMUST00000199624 890 ntAPPRIS P3 TSL 5 BASIC5.46□□□□□ -1.54
Smc1aQ9CU62 Chaer1-201ENSMUST00000201649 651 ntTSL 5 BASIC5.46□□□□□ -1.54
Smc1aQ9CU62 Gm19786-201ENSMUST00000222589 580 ntBASIC5.46□□□□□ -1.54
Smc1aQ9CU62 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Smc1aQ9CU62 Csn2-201ENSMUST00000082370 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Smc1aQ9CU62 Gm22350-201ENSMUST00000083924 156 ntBASIC5.46□□□□□ -1.54
Smc1aQ9CU62 Cd226-202ENSMUST00000097496 911 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Smc1aQ9CU62 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Smc1aQ9CU62 Vmn1r55-201ENSMUST00000098844 1284 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Smc1aQ9CU62 Olfr1487-205ENSMUST00000217061 4080 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Smc1aQ9CU62 Agbl1-201ENSMUST00000026854 3452 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
Smc1aQ9CU62 Olfr203-202ENSMUST00000215893 1521 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Smc1aQ9CU62 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Smc1aQ9CU62 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
Smc1aQ9CU62 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Smc1aQ9CU62 Serpinb9b-201ENSMUST00000006392 3253 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Smc1aQ9CU62 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Smc1aQ9CU62 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Smc1aQ9CU62 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC5.46□□□□□ -1.54
Smc1aQ9CU62 Scn7a-201ENSMUST00000042792 7338 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Smc1aQ9CU62 Mageb16-202ENSMUST00000114016 1725 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Smc1aQ9CU62 March1-211ENSMUST00000178982 4012 ntAPPRIS ALT1 TSL 5 BASIC5.45□□□□□ -1.54
Smc1aQ9CU62 Fpgt-201ENSMUST00000066568 3518 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Smc1aQ9CU62 Trim30e-ps1-201ENSMUST00000147064 1890 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Smc1aQ9CU62 Fgf7-201ENSMUST00000064794 2672 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Smc1aQ9CU62 Gm15170-201ENSMUST00000121593 2023 ntBASIC5.45□□□□□ -1.54
Smc1aQ9CU62 Gm38020-201ENSMUST00000193066 4676 ntBASIC5.45□□□□□ -1.54
Smc1aQ9CU62 Vmn2r24-201ENSMUST00000075095 2565 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Smc1aQ9CU62 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Smc1aQ9CU62 AC147639.2-202ENSMUST00000224834 1545 ntBASIC5.45□□□□□ -1.54
Smc1aQ9CU62 Abi3bp-203ENSMUST00000096013 4495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Smc1aQ9CU62 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Smc1aQ9CU62 Lpar4-201ENSMUST00000060576 4238 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Smc1aQ9CU62 Mir676-201ENSMUST00000102443 89 ntBASIC5.45□□□□□ -1.54
Smc1aQ9CU62 Gm25096-201ENSMUST00000104043 129 ntBASIC5.45□□□□□ -1.54
Smc1aQ9CU62 Homer1-208ENSMUST00000109495 813 ntTSL 5 BASIC5.45□□□□□ -1.54
Smc1aQ9CU62 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC5.45□□□□□ -1.54
Smc1aQ9CU62 Gm15297-201ENSMUST00000117795 290 ntBASIC5.45□□□□□ -1.54
Smc1aQ9CU62 Gm12328-201ENSMUST00000118611 197 ntBASIC5.45□□□□□ -1.54
Smc1aQ9CU62 Gm13367-201ENSMUST00000119955 796 ntBASIC5.45□□□□□ -1.54
Smc1aQ9CU62 Gm15866-201ENSMUST00000149048 785 ntTSL 5 BASIC5.45□□□□□ -1.54
Smc1aQ9CU62 Gm23441-201ENSMUST00000157268 127 ntBASIC5.45□□□□□ -1.54
Smc1aQ9CU62 Gm22730-201ENSMUST00000158085 171 ntBASIC5.45□□□□□ -1.54
Smc1aQ9CU62 Gm25348-201ENSMUST00000158961 111 ntBASIC5.45□□□□□ -1.54
Smc1aQ9CU62 Gm27492-201ENSMUST00000185194 187 ntBASIC5.45□□□□□ -1.54
Smc1aQ9CU62 Gm28468-201ENSMUST00000188536 615 ntBASIC5.45□□□□□ -1.54
Smc1aQ9CU62 Gm9134-201ENSMUST00000193186 551 ntBASIC5.45□□□□□ -1.54
Smc1aQ9CU62 Gm18150-201ENSMUST00000195341 645 ntBASIC5.45□□□□□ -1.54
Smc1aQ9CU62 Gm42666-201ENSMUST00000201954 152 ntBASIC5.45□□□□□ -1.54
Smc1aQ9CU62 Gm8999-201ENSMUST00000204951 969 ntBASIC5.45□□□□□ -1.54
Smc1aQ9CU62 B130024G19Rik-205ENSMUST00000207952 485 ntTSL 3 BASIC5.45□□□□□ -1.54
Smc1aQ9CU62 Gm18997-201ENSMUST00000216353 822 ntBASIC5.45□□□□□ -1.54
Smc1aQ9CU62 Gm5750-201ENSMUST00000218711 801 ntBASIC5.45□□□□□ -1.54
Smc1aQ9CU62 AC158803.3-201ENSMUST00000220024 211 ntBASIC5.45□□□□□ -1.54
Smc1aQ9CU62 Gm46369-201ENSMUST00000221577 401 ntBASIC5.45□□□□□ -1.54
Smc1aQ9CU62 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC5.45□□□□□ -1.54
Smc1aQ9CU62 Gm9512-201ENSMUST00000223112 497 ntBASIC5.45□□□□□ -1.54
Smc1aQ9CU62 AC154840.1-201ENSMUST00000225216 408 ntBASIC5.45□□□□□ -1.54
Smc1aQ9CU62 Vmn1r52-201ENSMUST00000079832 930 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Smc1aQ9CU62 Gm22826-201ENSMUST00000083774 165 ntBASIC5.45□□□□□ -1.54
Smc1aQ9CU62 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC5.45□□□□□ -1.54
Smc1aQ9CU62 Mtm1-213ENSMUST00000171933 3488 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Smc1aQ9CU62 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Smc1aQ9CU62 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Smc1aQ9CU62 Olfr992-202ENSMUST00000213749 2150 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Smc1aQ9CU62 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC5.44□□□□□ -1.54
Smc1aQ9CU62 4933403O08Rik-203ENSMUST00000164272 1517 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Smc1aQ9CU62 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC5.44□□□□□ -1.54
Smc1aQ9CU62 Gm29301-202ENSMUST00000189344 1502 ntTSL 5 BASIC5.44□□□□□ -1.54
Smc1aQ9CU62 Lrif1-201ENSMUST00000098750 3103 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Smc1aQ9CU62 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Smc1aQ9CU62 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC5.44□□□□□ -1.54
Smc1aQ9CU62 Gm14885-201ENSMUST00000117969 496 ntBASIC5.44□□□□□ -1.54
Smc1aQ9CU62 Gm14655-201ENSMUST00000120124 578 ntBASIC5.44□□□□□ -1.54
Smc1aQ9CU62 Mup-ps18-201ENSMUST00000120145 531 ntBASIC5.44□□□□□ -1.54
Smc1aQ9CU62 Mrpl24-203ENSMUST00000121048 1234 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Smc1aQ9CU62 Gm14229-201ENSMUST00000121178 850 ntBASIC5.44□□□□□ -1.54
Smc1aQ9CU62 Gm12854-201ENSMUST00000128518 297 ntBASIC5.44□□□□□ -1.54
Smc1aQ9CU62 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC5.44□□□□□ -1.54
Smc1aQ9CU62 4933430M04Rik-201ENSMUST00000152726 744 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Smc1aQ9CU62 Gm24944-201ENSMUST00000158330 128 ntBASIC5.44□□□□□ -1.54
Smc1aQ9CU62 Gm17091-201ENSMUST00000163248 357 ntBASIC5.44□□□□□ -1.54
Smc1aQ9CU62 Gm28847-201ENSMUST00000186778 700 ntBASIC5.44□□□□□ -1.54
Smc1aQ9CU62 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Smc1aQ9CU62 Gm18864-201ENSMUST00000194518 1051 ntBASIC5.44□□□□□ -1.54
Smc1aQ9CU62 Gm38243-201ENSMUST00000194737 1567 ntBASIC5.44□□□□□ -1.54
Smc1aQ9CU62 Gm36986-201ENSMUST00000195320 353 ntBASIC5.44□□□□□ -1.54
Smc1aQ9CU62 Gm5288-201ENSMUST00000198323 1119 ntBASIC5.44□□□□□ -1.54
Smc1aQ9CU62 Gm43418-201ENSMUST00000201334 428 ntBASIC5.44□□□□□ -1.54
Smc1aQ9CU62 Olfr494-201ENSMUST00000209743 1002 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
Smc1aQ9CU62 Olfr494-202ENSMUST00000210291 947 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Smc1aQ9CU62 Gm46191-201ENSMUST00000218899 433 ntBASIC5.44□□□□□ -1.54
Smc1aQ9CU62 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC5.44□□□□□ -1.54
Smc1aQ9CU62 AC141884.1-201ENSMUST00000226327 636 ntBASIC5.44□□□□□ -1.54
Smc1aQ9CU62 Olfr1018-201ENSMUST00000054201 936 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Smc1aQ9CU62 Gm7665-201ENSMUST00000076710 297 ntBASIC5.44□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms