Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Mcmdc2-205ENSMUST00000171802 2553 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Use1Q9CQ56 Nlrp4f-204ENSMUST00000221659 3551 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Use1Q9CQ56 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC4.5□□□□□ -1.69
Use1Q9CQ56 Mir680-1-201ENSMUST00000102257 109 ntBASIC4.5□□□□□ -1.69
Use1Q9CQ56 Gm22273-201ENSMUST00000104040 132 ntBASIC4.5□□□□□ -1.69
Use1Q9CQ56 Gm12379-201ENSMUST00000119607 391 ntBASIC4.5□□□□□ -1.69
Use1Q9CQ56 Gm15745-201ENSMUST00000119807 115 ntBASIC4.5□□□□□ -1.69
Use1Q9CQ56 Gm12807-201ENSMUST00000121546 962 ntBASIC4.5□□□□□ -1.69
Use1Q9CQ56 Gm13599-201ENSMUST00000134476 678 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Use1Q9CQ56 Gm23897-201ENSMUST00000158110 158 ntBASIC4.5□□□□□ -1.69
Use1Q9CQ56 Gm22940-201ENSMUST00000158560 155 ntBASIC4.5□□□□□ -1.69
Use1Q9CQ56 Rpl9-ps9-201ENSMUST00000173020 573 ntBASIC4.5□□□□□ -1.69
Use1Q9CQ56 4831440E17Rik-201ENSMUST00000181942 1028 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Use1Q9CQ56 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC4.5□□□□□ -1.69
Use1Q9CQ56 Obox8-201ENSMUST00000184356 1167 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Use1Q9CQ56 Gm6075-201ENSMUST00000186816 486 ntBASIC4.5□□□□□ -1.69
Use1Q9CQ56 Gm28803-201ENSMUST00000190385 764 ntBASIC4.5□□□□□ -1.69
Use1Q9CQ56 Gm37070-201ENSMUST00000193272 460 ntBASIC4.5□□□□□ -1.69
Use1Q9CQ56 Gm20056-201ENSMUST00000194813 519 ntBASIC4.5□□□□□ -1.69
Use1Q9CQ56 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Use1Q9CQ56 AC136146.1-201ENSMUST00000196180 91 ntBASIC4.5□□□□□ -1.69
Use1Q9CQ56 4930539C22Rik-201ENSMUST00000198231 970 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Use1Q9CQ56 Olfr519-202ENSMUST00000202706 945 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Use1Q9CQ56 Gm45083-201ENSMUST00000205216 712 ntTSL 3 BASIC4.5□□□□□ -1.69
Use1Q9CQ56 Gm4574-201ENSMUST00000207804 542 ntBASIC4.5□□□□□ -1.69
Use1Q9CQ56 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC4.5□□□□□ -1.69
Use1Q9CQ56 Olfr1217-202ENSMUST00000213669 3839 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Use1Q9CQ56 AC153729.2-201ENSMUST00000215166 560 ntTSL 3 BASIC4.5□□□□□ -1.69
Use1Q9CQ56 Gm18904-201ENSMUST00000218756 329 ntBASIC4.5□□□□□ -1.69
Use1Q9CQ56 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC4.5□□□□□ -1.69
Use1Q9CQ56 Gm6171-201ENSMUST00000220760 645 ntBASIC4.5□□□□□ -1.69
Use1Q9CQ56 Gm40662-201ENSMUST00000222208 453 ntTSL 5 BASIC4.5□□□□□ -1.69
Use1Q9CQ56 Gm40662-202ENSMUST00000222263 487 ntTSL 5 BASIC4.5□□□□□ -1.69
Use1Q9CQ56 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC4.5□□□□□ -1.69
Use1Q9CQ56 Gm7040-201ENSMUST00000223271 443 ntBASIC4.5□□□□□ -1.69
Use1Q9CQ56 AC131745.1-201ENSMUST00000223660 330 ntBASIC4.5□□□□□ -1.69
Use1Q9CQ56 AC141884.1-201ENSMUST00000226327 636 ntBASIC4.5□□□□□ -1.69
Use1Q9CQ56 Fabp2-201ENSMUST00000023820 965 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Use1Q9CQ56 Gnrhr-201ENSMUST00000031172 1211 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Use1Q9CQ56 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Use1Q9CQ56 Olfr741-201ENSMUST00000071932 936 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Use1Q9CQ56 Olfr510-201ENSMUST00000076289 945 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Use1Q9CQ56 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Use1Q9CQ56 Olfr477-201ENSMUST00000091605 933 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Use1Q9CQ56 Clca4c-ps-201ENSMUST00000098551 712 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Use1Q9CQ56 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Use1Q9CQ56 Gm43528-201ENSMUST00000199492 1674 ntBASIC4.5□□□□□ -1.69
Use1Q9CQ56 AC159476.1-201ENSMUST00000215914 1668 ntBASIC4.5□□□□□ -1.69
Use1Q9CQ56 Fap-202ENSMUST00000102732 2751 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
Use1Q9CQ56 Gm17131-201ENSMUST00000164420 3846 ntBASIC4.5□□□□□ -1.69
Use1Q9CQ56 Zfp975-201ENSMUST00000107992 3148 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Use1Q9CQ56 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Use1Q9CQ56 Slc5a12-201ENSMUST00000045972 3529 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Use1Q9CQ56 Gm42645-201ENSMUST00000201573 1627 ntBASIC4.5□□□□□ -1.69
Use1Q9CQ56 Gm37733-201ENSMUST00000195478 2962 ntBASIC4.5□□□□□ -1.69
Use1Q9CQ56 Gm43882-201ENSMUST00000204871 2264 ntBASIC4.49□□□□□ -1.69
Use1Q9CQ56 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Use1Q9CQ56 Sbno1-201ENSMUST00000065263 10071 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Use1Q9CQ56 Gm24230-201ENSMUST00000104313 129 ntBASIC4.49□□□□□ -1.69
Use1Q9CQ56 Gm11550-201ENSMUST00000118210 699 ntBASIC4.49□□□□□ -1.69
Use1Q9CQ56 Gm12444-201ENSMUST00000121512 877 ntBASIC4.49□□□□□ -1.69
Use1Q9CQ56 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Use1Q9CQ56 Gm12909-201ENSMUST00000134190 620 ntTSL 2 BASIC4.49□□□□□ -1.69
Use1Q9CQ56 Gm14582-201ENSMUST00000141697 1189 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Use1Q9CQ56 Gm24441-201ENSMUST00000157235 281 ntBASIC4.49□□□□□ -1.69
Use1Q9CQ56 Gm23179-201ENSMUST00000158693 304 ntBASIC4.49□□□□□ -1.69
Use1Q9CQ56 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Use1Q9CQ56 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC4.49□□□□□ -1.69
Use1Q9CQ56 Mir3080-201ENSMUST00000175010 79 ntBASIC4.49□□□□□ -1.69
Use1Q9CQ56 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC4.49□□□□□ -1.69
Use1Q9CQ56 1700029B22Rik-202ENSMUST00000186532 694 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Use1Q9CQ56 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Use1Q9CQ56 Gm37973-201ENSMUST00000195767 1289 ntBASIC4.49□□□□□ -1.69
Use1Q9CQ56 Gm8929-201ENSMUST00000197781 1132 ntBASIC4.49□□□□□ -1.69
Use1Q9CQ56 Gm43418-201ENSMUST00000201334 428 ntBASIC4.49□□□□□ -1.69
Use1Q9CQ56 Gm44816-201ENSMUST00000206666 477 ntBASIC4.49□□□□□ -1.69
Use1Q9CQ56 Gm18924-201ENSMUST00000211929 316 ntBASIC4.49□□□□□ -1.69
Use1Q9CQ56 AC151968.1-201ENSMUST00000214437 568 ntTSL 5 BASIC4.49□□□□□ -1.69
Use1Q9CQ56 Gm18789-201ENSMUST00000216115 550 ntBASIC4.49□□□□□ -1.69
Use1Q9CQ56 Gm9269-201ENSMUST00000221661 578 ntBASIC4.49□□□□□ -1.69
Use1Q9CQ56 AC159252.1-201ENSMUST00000224450 553 ntBASIC4.49□□□□□ -1.69
Use1Q9CQ56 AC124408.1-201ENSMUST00000228938 707 ntBASIC4.49□□□□□ -1.69
Use1Q9CQ56 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Use1Q9CQ56 Gm5215-201ENSMUST00000054380 405 ntBASIC4.49□□□□□ -1.69
Use1Q9CQ56 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Use1Q9CQ56 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Use1Q9CQ56 Olfr99-201ENSMUST00000077585 918 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Use1Q9CQ56 Gm6177-201ENSMUST00000085589 465 ntBASIC4.49□□□□□ -1.69
Use1Q9CQ56 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
Use1Q9CQ56 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
Use1Q9CQ56 Vmn1r35-202ENSMUST00000227346 1854 ntBASIC4.49□□□□□ -1.69
Use1Q9CQ56 Olfr19-202ENSMUST00000206365 1967 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
Use1Q9CQ56 Gm37569-201ENSMUST00000192111 1722 ntBASIC4.49□□□□□ -1.69
Use1Q9CQ56 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
Use1Q9CQ56 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Use1Q9CQ56 Clec4a1-201ENSMUST00000060484 1558 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Use1Q9CQ56 Olfr870-202ENSMUST00000215984 4091 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Use1Q9CQ56 Gm8402-201ENSMUST00000118183 1770 ntBASIC4.48□□□□□ -1.69
Use1Q9CQ56 Gm8383-201ENSMUST00000121179 1770 ntBASIC4.48□□□□□ -1.69
Use1Q9CQ56 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 113.5 ms