Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Trim11Q99PQ2 Gm10310-202ENSMUST00000213667 4661 ntAPPRIS P5 TSL 5 BASIC6.8□□□□□ -1.32
Trim11Q99PQ2 Olfr1036-201ENSMUST00000164985 3203 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Trim11Q99PQ2 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC6.8□□□□□ -1.32
Trim11Q99PQ2 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
Trim11Q99PQ2 Gm45424-201ENSMUST00000210575 3300 ntBASIC6.79□□□□□ -1.32
Trim11Q99PQ2 Gm42715-201ENSMUST00000189629 12746 ntAPPRIS P5 TSL 5 BASIC6.79□□□□□ -1.32
Trim11Q99PQ2 Pnpla8-202ENSMUST00000122902 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Trim11Q99PQ2 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Trim11Q99PQ2 AC158982.1-205ENSMUST00000227339 1876 ntBASIC6.79□□□□□ -1.32
Trim11Q99PQ2 Gm42873-201ENSMUST00000196110 1726 ntBASIC6.79□□□□□ -1.32
Trim11Q99PQ2 Gm37076-201ENSMUST00000192033 2294 ntBASIC6.79□□□□□ -1.32
Trim11Q99PQ2 P2ry12-201ENSMUST00000050360 2250 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Trim11Q99PQ2 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Trim11Q99PQ2 Olfr419-202ENSMUST00000214725 2685 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Trim11Q99PQ2 Tet2-201ENSMUST00000098603 9179 ntAPPRIS P3 TSL 5 BASIC6.79□□□□□ -1.32
Trim11Q99PQ2 Gm5594-201ENSMUST00000172712 1429 ntBASIC6.79□□□□□ -1.32
Trim11Q99PQ2 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Trim11Q99PQ2 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC6.79□□□□□ -1.32
Trim11Q99PQ2 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Trim11Q99PQ2 Gm24272-201ENSMUST00000102329 98 ntBASIC6.79□□□□□ -1.32
Trim11Q99PQ2 Gm25795-201ENSMUST00000104421 132 ntBASIC6.79□□□□□ -1.32
Trim11Q99PQ2 Gm14711-201ENSMUST00000117056 217 ntBASIC6.79□□□□□ -1.32
Trim11Q99PQ2 Gm13770-201ENSMUST00000117149 305 ntBASIC6.79□□□□□ -1.32
Trim11Q99PQ2 Gm14930-201ENSMUST00000118864 652 ntBASIC6.79□□□□□ -1.32
Trim11Q99PQ2 Gm6031-201ENSMUST00000121314 1054 ntBASIC6.79□□□□□ -1.32
Trim11Q99PQ2 4933433F19Rik-201ENSMUST00000180571 1088 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Trim11Q99PQ2 Gm26554-201ENSMUST00000180801 845 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Trim11Q99PQ2 Gm27004-201ENSMUST00000183300 727 ntBASIC6.79□□□□□ -1.32
Trim11Q99PQ2 Gm27313-201ENSMUST00000183500 142 ntBASIC6.79□□□□□ -1.32
Trim11Q99PQ2 Trav1-202ENSMUST00000185651 329 ntAPPRIS ALT2 BASIC6.79□□□□□ -1.32
Trim11Q99PQ2 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Trim11Q99PQ2 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Trim11Q99PQ2 Gm21654-201ENSMUST00000188086 691 ntBASIC6.79□□□□□ -1.32
Trim11Q99PQ2 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Trim11Q99PQ2 Gm5694-201ENSMUST00000195648 641 ntBASIC6.79□□□□□ -1.32
Trim11Q99PQ2 Gm19147-201ENSMUST00000199622 652 ntBASIC6.79□□□□□ -1.32
Trim11Q99PQ2 Gm45171-201ENSMUST00000206360 736 ntBASIC6.79□□□□□ -1.32
Trim11Q99PQ2 Gm17987-201ENSMUST00000206902 603 ntBASIC6.79□□□□□ -1.32
Trim11Q99PQ2 Gm6702-201ENSMUST00000208496 471 ntBASIC6.79□□□□□ -1.32
Trim11Q99PQ2 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC6.79□□□□□ -1.32
Trim11Q99PQ2 Gm45267-201ENSMUST00000211028 522 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Trim11Q99PQ2 Gm3266-201ENSMUST00000217832 591 ntBASIC6.79□□□□□ -1.32
Trim11Q99PQ2 AC151904.3-201ENSMUST00000219266 895 ntBASIC6.79□□□□□ -1.32
Trim11Q99PQ2 AC160970.1-201ENSMUST00000219311 475 ntBASIC6.79□□□□□ -1.32
Trim11Q99PQ2 Gm10037-203ENSMUST00000221620 636 ntAPPRIS P5 TSL 3 BASIC6.79□□□□□ -1.32
Trim11Q99PQ2 Gm40271-201ENSMUST00000221752 422 ntTSL 3 BASIC6.79□□□□□ -1.32
Trim11Q99PQ2 Gstz1-204ENSMUST00000222222 724 ntAPPRIS ALT1 TSL 2 BASIC6.79□□□□□ -1.32
Trim11Q99PQ2 Gm36262-201ENSMUST00000223274 499 ntBASIC6.79□□□□□ -1.32
Trim11Q99PQ2 AC154600.1-201ENSMUST00000226480 714 ntBASIC6.79□□□□□ -1.32
Trim11Q99PQ2 AC163646.2-201ENSMUST00000227962 141 ntBASIC6.79□□□□□ -1.32
Trim11Q99PQ2 Gstk1-201ENSMUST00000031897 930 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Trim11Q99PQ2 Morn2-201ENSMUST00000061703 644 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Trim11Q99PQ2 Klrc3-201ENSMUST00000071149 715 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Trim11Q99PQ2 Olfr1206-201ENSMUST00000077302 924 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Trim11Q99PQ2 Gm23846-201ENSMUST00000083835 107 ntBASIC6.79□□□□□ -1.32
Trim11Q99PQ2 Gm24917-201ENSMUST00000083935 104 ntBASIC6.79□□□□□ -1.32
Trim11Q99PQ2 4930567H17Rik-201ENSMUST00000092405 840 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Trim11Q99PQ2 Olfr593-201ENSMUST00000098206 984 ntAPPRIS P2 BASIC6.79□□□□□ -1.32
Trim11Q99PQ2 Olfr1195-201ENSMUST00000099818 927 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Trim11Q99PQ2 Gm13101-201ENSMUST00000105763 1678 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Trim11Q99PQ2 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Trim11Q99PQ2 Gm36963-201ENSMUST00000193506 2324 ntBASIC6.79□□□□□ -1.32
Trim11Q99PQ2 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Trim11Q99PQ2 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Trim11Q99PQ2 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Trim11Q99PQ2 Gm15354-201ENSMUST00000132019 1772 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Trim11Q99PQ2 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Trim11Q99PQ2 Gm10319-201ENSMUST00000078431 1355 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Trim11Q99PQ2 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC6.79□□□□□ -1.32
Trim11Q99PQ2 Gm45632-201ENSMUST00000211532 1888 ntBASIC6.79□□□□□ -1.32
Trim11Q99PQ2 Gm43523-201ENSMUST00000197397 2878 ntBASIC6.79□□□□□ -1.32
Trim11Q99PQ2 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Trim11Q99PQ2 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
Trim11Q99PQ2 Olfr888-202ENSMUST00000211851 2930 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
Trim11Q99PQ2 Olfr934-203ENSMUST00000216823 2440 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Trim11Q99PQ2 Olfr1065-201ENSMUST00000213789 2154 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
Trim11Q99PQ2 Olfr1065-204ENSMUST00000217586 2174 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Trim11Q99PQ2 Olfr39-202ENSMUST00000212983 2028 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
Trim11Q99PQ2 Olfr527-203ENSMUST00000214858 3362 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Trim11Q99PQ2 Mctp1-205ENSMUST00000126960 1780 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Trim11Q99PQ2 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Trim11Q99PQ2 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Trim11Q99PQ2 Tor1aip1-210ENSMUST00000169241 3716 ntAPPRIS ALT2 TSL 3 BASIC6.78□□□□□ -1.32
Trim11Q99PQ2 Stk38l-201ENSMUST00000001675 4550 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Trim11Q99PQ2 Gm26740-202ENSMUST00000181532 1531 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Trim11Q99PQ2 Cyp4a32-201ENSMUST00000084342 1530 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Trim11Q99PQ2 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Trim11Q99PQ2 Olfr1117-ps1-201ENSMUST00000118736 984 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Trim11Q99PQ2 Gm16216-201ENSMUST00000118970 1111 ntBASIC6.78□□□□□ -1.32
Trim11Q99PQ2 Gm6744-201ENSMUST00000119303 543 ntBASIC6.78□□□□□ -1.32
Trim11Q99PQ2 Gm11943-201ENSMUST00000119473 327 ntBASIC6.78□□□□□ -1.32
Trim11Q99PQ2 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Trim11Q99PQ2 Gm23754-201ENSMUST00000157576 63 ntBASIC6.78□□□□□ -1.32
Trim11Q99PQ2 Mir1945-201ENSMUST00000157919 78 ntBASIC6.78□□□□□ -1.32
Trim11Q99PQ2 Gm6619-201ENSMUST00000159229 608 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Trim11Q99PQ2 5430401F13Rik-202ENSMUST00000161385 608 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Trim11Q99PQ2 Gm17202-201ENSMUST00000171723 951 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Trim11Q99PQ2 Gm9587-201ENSMUST00000172449 454 ntBASIC6.78□□□□□ -1.32
Trim11Q99PQ2 Mrgpra9-202ENSMUST00000179005 1090 ntAPPRIS P2 TSL 5 BASIC6.78□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 130.8 ms