Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm21626-202ENSMUST00000189751 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm28851-202ENSMUST00000189757 484 ntBASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm28656-201ENSMUST00000190017 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm28461-201ENSMUST00000190023 484 ntBASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm21562-202ENSMUST00000190314 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm28517-201ENSMUST00000190343 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm29531-201ENSMUST00000190569 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm21914-202ENSMUST00000190577 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm20978-201ENSMUST00000190688 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm20963-201ENSMUST00000190880 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm29316-201ENSMUST00000190953 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm29351-201ENSMUST00000191052 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm29466-201ENSMUST00000191077 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm20987-201ENSMUST00000191165 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm28194-202ENSMUST00000191217 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm28461-202ENSMUST00000191406 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm37927-201ENSMUST00000192238 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm37544-201ENSMUST00000192803 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm37635-201ENSMUST00000193129 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm37243-201ENSMUST00000193407 595 ntBASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm21809-202ENSMUST00000194072 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm37830-201ENSMUST00000195282 837 ntTSL 5 BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 BX530055.1-201ENSMUST00000197285 122 ntBASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm45006-201ENSMUST00000206078 690 ntBASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm19366-201ENSMUST00000206996 156 ntBASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm6477-201ENSMUST00000217098 764 ntBASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 AC167202.1-201ENSMUST00000219027 331 ntBASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Glipr1l3-201ENSMUST00000220085 892 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 AC154450.1-201ENSMUST00000220911 485 ntBASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 CT954323.2-201ENSMUST00000222056 213 ntBASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 AC131743.3-201ENSMUST00000222099 662 ntBASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 AC154576.2-203ENSMUST00000224736 253 ntBASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Olfr1359-201ENSMUST00000077843 991 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Olfr493-201ENSMUST00000080106 945 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Mir449a-201ENSMUST00000083641 91 ntBASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Zfp850-201ENSMUST00000099111 941 ntBASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Slfn8-201ENSMUST00000038141 4011 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm43920-201ENSMUST00000204953 2159 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm15128-202ENSMUST00000178833 1350 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Olfr617-203ENSMUST00000216516 3083 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm18852-201ENSMUST00000184149 3593 ntBASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Olfr1309-206ENSMUST00000217452 5257 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Ccdc28bQ8CEG5 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC4.74□□□□□ -1.65
Ccdc28bQ8CEG5 Gm7988-201ENSMUST00000196623 2297 ntBASIC4.74□□□□□ -1.65
Ccdc28bQ8CEG5 Olfr1406-203ENSMUST00000215878 3149 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Ccdc28bQ8CEG5 Gm8402-201ENSMUST00000118183 1770 ntBASIC4.74□□□□□ -1.65
Ccdc28bQ8CEG5 Gm8383-201ENSMUST00000121179 1770 ntBASIC4.74□□□□□ -1.65
Ccdc28bQ8CEG5 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Ccdc28bQ8CEG5 Spin2d-201ENSMUST00000114517 1015 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Ccdc28bQ8CEG5 Gm5754-201ENSMUST00000118774 892 ntBASIC4.74□□□□□ -1.65
Ccdc28bQ8CEG5 Gm14067-201ENSMUST00000119340 314 ntBASIC4.74□□□□□ -1.65
Ccdc28bQ8CEG5 Llph-ps2-201ENSMUST00000122000 393 ntBASIC4.74□□□□□ -1.65
Ccdc28bQ8CEG5 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC4.74□□□□□ -1.65
Ccdc28bQ8CEG5 4930547E08Rik-201ENSMUST00000143559 541 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Ccdc28bQ8CEG5 Gm24065-201ENSMUST00000157487 264 ntBASIC4.74□□□□□ -1.65
Ccdc28bQ8CEG5 Gm22210-201ENSMUST00000158101 144 ntBASIC4.74□□□□□ -1.65
Ccdc28bQ8CEG5 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Ccdc28bQ8CEG5 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC4.74□□□□□ -1.65
Ccdc28bQ8CEG5 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
Ccdc28bQ8CEG5 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
Ccdc28bQ8CEG5 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC4.74□□□□□ -1.65
Ccdc28bQ8CEG5 Trav12n-3-201ENSMUST00000179583 353 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Ccdc28bQ8CEG5 Gm18445-201ENSMUST00000195502 774 ntBASIC4.74□□□□□ -1.65
Ccdc28bQ8CEG5 Gm42830-201ENSMUST00000196642 313 ntBASIC4.74□□□□□ -1.65
Ccdc28bQ8CEG5 Gm6590-201ENSMUST00000203343 687 ntBASIC4.74□□□□□ -1.65
Ccdc28bQ8CEG5 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC4.74□□□□□ -1.65
Ccdc28bQ8CEG5 Gm44845-201ENSMUST00000208773 335 ntBASIC4.74□□□□□ -1.65
Ccdc28bQ8CEG5 Gm18193-201ENSMUST00000210017 772 ntBASIC4.74□□□□□ -1.65
Ccdc28bQ8CEG5 Gm20586-201ENSMUST00000210122 547 ntBASIC4.74□□□□□ -1.65
Ccdc28bQ8CEG5 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC4.74□□□□□ -1.65
Ccdc28bQ8CEG5 AC129085.4-201ENSMUST00000224536 570 ntBASIC4.74□□□□□ -1.65
Ccdc28bQ8CEG5 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Ccdc28bQ8CEG5 Olfr934-201ENSMUST00000074211 933 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Ccdc28bQ8CEG5 Olfr836-201ENSMUST00000074986 955 ntAPPRIS P2 BASIC4.74□□□□□ -1.65
Ccdc28bQ8CEG5 Mir298-201ENSMUST00000083476 82 ntBASIC4.74□□□□□ -1.65
Ccdc28bQ8CEG5 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Ccdc28bQ8CEG5 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Ccdc28bQ8CEG5 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Ccdc28bQ8CEG5 Plcb4-201ENSMUST00000035646 3635 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Ccdc28bQ8CEG5 Olfr599-202ENSMUST00000214329 2183 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Ccdc28bQ8CEG5 AC168056.3-201ENSMUST00000225395 2540 ntBASIC4.74□□□□□ -1.65
Ccdc28bQ8CEG5 Sult1c1-201ENSMUST00000024738 1556 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Ccdc28bQ8CEG5 AC123705.2-201ENSMUST00000221653 2009 ntBASIC4.73□□□□□ -1.65
Ccdc28bQ8CEG5 AC153959.1-201ENSMUST00000213617 1694 ntBASIC4.73□□□□□ -1.65
Ccdc28bQ8CEG5 Vmn2r51-201ENSMUST00000094863 2559 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Ccdc28bQ8CEG5 Gm36951-201ENSMUST00000193840 2687 ntBASIC4.73□□□□□ -1.65
Ccdc28bQ8CEG5 Gm42645-201ENSMUST00000201573 1627 ntBASIC4.73□□□□□ -1.65
Ccdc28bQ8CEG5 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Ccdc28bQ8CEG5 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Ccdc28bQ8CEG5 Gm24608-201ENSMUST00000104381 136 ntBASIC4.73□□□□□ -1.65
Ccdc28bQ8CEG5 2610024D14Rik-201ENSMUST00000121233 294 ntBASIC4.73□□□□□ -1.65
Ccdc28bQ8CEG5 Gm13610-201ENSMUST00000128298 951 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Ccdc28bQ8CEG5 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms