Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Gm12887-201ENSMUST00000106265 360 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Ccdc38Q8CDN8 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Ccdc38Q8CDN8 Nr3c2-202ENSMUST00000109911 3804 ntTSL 5 BASIC5.4□□□□□ -1.54
Ccdc38Q8CDN8 Gm11804-201ENSMUST00000121663 468 ntBASIC5.4□□□□□ -1.54
Ccdc38Q8CDN8 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC5.4□□□□□ -1.54
Ccdc38Q8CDN8 1700061J23Rik-201ENSMUST00000141678 537 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Ccdc38Q8CDN8 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC5.4□□□□□ -1.54
Ccdc38Q8CDN8 Gm12147-201ENSMUST00000144024 182 ntTSL 3 BASIC5.4□□□□□ -1.54
Ccdc38Q8CDN8 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Ccdc38Q8CDN8 Gm5726-201ENSMUST00000173886 924 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Ccdc38Q8CDN8 Gm8677-201ENSMUST00000174637 924 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Ccdc38Q8CDN8 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Ccdc38Q8CDN8 Gm27255-201ENSMUST00000184303 529 ntTSL 3 BASIC5.4□□□□□ -1.54
Ccdc38Q8CDN8 Gm17953-201ENSMUST00000192061 667 ntBASIC5.4□□□□□ -1.54
Ccdc38Q8CDN8 Gm6057-201ENSMUST00000195927 314 ntBASIC5.4□□□□□ -1.54
Ccdc38Q8CDN8 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Ccdc38Q8CDN8 Gm43700-201ENSMUST00000200967 316 ntTSL 5 BASIC5.4□□□□□ -1.54
Ccdc38Q8CDN8 Gm43945-201ENSMUST00000203595 754 ntBASIC5.4□□□□□ -1.54
Ccdc38Q8CDN8 Gm44171-201ENSMUST00000203701 2109 ntBASIC5.4□□□□□ -1.54
Ccdc38Q8CDN8 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC5.4□□□□□ -1.54
Ccdc38Q8CDN8 AC152062.1-201ENSMUST00000218129 386 ntBASIC5.4□□□□□ -1.54
Ccdc38Q8CDN8 AC102435.1-205ENSMUST00000221064 1097 ntTSL 5 BASIC5.4□□□□□ -1.54
Ccdc38Q8CDN8 CT025548.1-201ENSMUST00000227459 257 ntBASIC5.4□□□□□ -1.54
Ccdc38Q8CDN8 AC192088.3-201ENSMUST00000227858 831 ntBASIC5.4□□□□□ -1.54
Ccdc38Q8CDN8 Gm22741-201ENSMUST00000083438 165 ntBASIC5.4□□□□□ -1.54
Ccdc38Q8CDN8 Gm10727-201ENSMUST00000197107 1602 ntBASIC5.4□□□□□ -1.55
Ccdc38Q8CDN8 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC5.4□□□□□ -1.55
Ccdc38Q8CDN8 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Ccdc38Q8CDN8 Zfand6-201ENSMUST00000069537 1658 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Ccdc38Q8CDN8 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Ccdc38Q8CDN8 Gm20631-201ENSMUST00000177239 5697 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Ccdc38Q8CDN8 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Ccdc38Q8CDN8 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC5.39□□□□□ -1.55
Ccdc38Q8CDN8 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Ccdc38Q8CDN8 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Ccdc38Q8CDN8 AC154329.1-201ENSMUST00000224408 3129 ntBASIC5.39□□□□□ -1.55
Ccdc38Q8CDN8 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC5.39□□□□□ -1.55
Ccdc38Q8CDN8 AC127371.2-201ENSMUST00000228108 1933 ntBASIC5.39□□□□□ -1.55
Ccdc38Q8CDN8 Gm8989-201ENSMUST00000184782 7275 ntBASIC5.39□□□□□ -1.55
Ccdc38Q8CDN8 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
Ccdc38Q8CDN8 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC5.39□□□□□ -1.55
Ccdc38Q8CDN8 Spin2d-201ENSMUST00000114517 1015 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Ccdc38Q8CDN8 Gm9427-201ENSMUST00000116187 651 ntBASIC5.39□□□□□ -1.55
Ccdc38Q8CDN8 Spin2-ps1-201ENSMUST00000116643 875 ntBASIC5.39□□□□□ -1.55
Ccdc38Q8CDN8 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC5.39□□□□□ -1.55
Ccdc38Q8CDN8 Gm13491-201ENSMUST00000118267 235 ntBASIC5.39□□□□□ -1.55
Ccdc38Q8CDN8 Gm15785-201ENSMUST00000119145 694 ntBASIC5.39□□□□□ -1.55
Ccdc38Q8CDN8 Gm7189-201ENSMUST00000119811 429 ntBASIC5.39□□□□□ -1.55
Ccdc38Q8CDN8 Gm3757-201ENSMUST00000125878 675 ntBASIC5.39□□□□□ -1.55
Ccdc38Q8CDN8 Gm15866-201ENSMUST00000149048 785 ntTSL 5 BASIC5.39□□□□□ -1.55
Ccdc38Q8CDN8 Gm25456-201ENSMUST00000157952 109 ntBASIC5.39□□□□□ -1.55
Ccdc38Q8CDN8 Gm17091-201ENSMUST00000163248 357 ntBASIC5.39□□□□□ -1.55
Ccdc38Q8CDN8 Gm2959-201ENSMUST00000169844 621 ntBASIC5.39□□□□□ -1.55
Ccdc38Q8CDN8 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Ccdc38Q8CDN8 Mir6911-201ENSMUST00000184241 69 ntBASIC5.39□□□□□ -1.55
Ccdc38Q8CDN8 1700027H10Rik-201ENSMUST00000186818 584 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Ccdc38Q8CDN8 Gm28500-201ENSMUST00000190286 151 ntBASIC5.39□□□□□ -1.55
Ccdc38Q8CDN8 Gm10292-202ENSMUST00000193165 585 ntBASIC5.39□□□□□ -1.55
Ccdc38Q8CDN8 Gm20056-201ENSMUST00000194813 519 ntBASIC5.39□□□□□ -1.55
Ccdc38Q8CDN8 Gm30043-201ENSMUST00000196689 733 ntTSL 2 BASIC5.39□□□□□ -1.55
Ccdc38Q8CDN8 Gm42437-201ENSMUST00000197263 923 ntBASIC5.39□□□□□ -1.55
Ccdc38Q8CDN8 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Ccdc38Q8CDN8 Olfr856-ps1-201ENSMUST00000212177 948 ntBASIC5.39□□□□□ -1.55
Ccdc38Q8CDN8 AC110381.1-201ENSMUST00000218987 586 ntBASIC5.39□□□□□ -1.55
Ccdc38Q8CDN8 AC125539.2-202ENSMUST00000227983 587 ntBASIC5.39□□□□□ -1.55
Ccdc38Q8CDN8 Gnrhr-201ENSMUST00000031172 1211 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Ccdc38Q8CDN8 Clec2j-201ENSMUST00000032517 515 ntBASIC5.39□□□□□ -1.55
Ccdc38Q8CDN8 Gm26163-201ENSMUST00000083792 178 ntBASIC5.39□□□□□ -1.55
Ccdc38Q8CDN8 Olfr1474-201ENSMUST00000096202 945 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Ccdc38Q8CDN8 Zfp850-201ENSMUST00000099111 941 ntBASIC5.39□□□□□ -1.55
Ccdc38Q8CDN8 Olfr1049-201ENSMUST00000099899 953 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Ccdc38Q8CDN8 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
Ccdc38Q8CDN8 AC153959.1-201ENSMUST00000213617 1694 ntBASIC5.39□□□□□ -1.55
Ccdc38Q8CDN8 Olfr235-202ENSMUST00000207969 2447 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
Ccdc38Q8CDN8 Gm43920-201ENSMUST00000204953 2159 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Ccdc38Q8CDN8 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Ccdc38Q8CDN8 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Ccdc38Q8CDN8 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC5.38□□□□□ -1.55
Ccdc38Q8CDN8 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC5.38□□□□□ -1.55
Ccdc38Q8CDN8 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Ccdc38Q8CDN8 Olfr699-203ENSMUST00000216307 4193 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Ccdc38Q8CDN8 Olfr1094-201ENSMUST00000105211 1147 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Ccdc38Q8CDN8 Gm11550-201ENSMUST00000118210 699 ntBASIC5.38□□□□□ -1.55
Ccdc38Q8CDN8 Gm13887-201ENSMUST00000119009 344 ntBASIC5.38□□□□□ -1.55
Ccdc38Q8CDN8 Gm13867-201ENSMUST00000120844 395 ntBASIC5.38□□□□□ -1.55
Ccdc38Q8CDN8 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC5.38□□□□□ -1.55
Ccdc38Q8CDN8 Gm14582-201ENSMUST00000141697 1189 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Ccdc38Q8CDN8 Gm23441-201ENSMUST00000157268 127 ntBASIC5.38□□□□□ -1.55
Ccdc38Q8CDN8 Gm23250-201ENSMUST00000157444 267 ntBASIC5.38□□□□□ -1.55
Ccdc38Q8CDN8 Gm16094-201ENSMUST00000162784 427 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Ccdc38Q8CDN8 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Ccdc38Q8CDN8 Gm4222-201ENSMUST00000165784 470 ntBASIC5.38□□□□□ -1.55
Ccdc38Q8CDN8 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Ccdc38Q8CDN8 Vmn2r-ps124-201ENSMUST00000176236 903 ntBASIC5.38□□□□□ -1.55
Ccdc38Q8CDN8 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC5.38□□□□□ -1.55
Ccdc38Q8CDN8 Gm37908-201ENSMUST00000195828 470 ntBASIC5.38□□□□□ -1.55
Ccdc38Q8CDN8 AC136146.1-201ENSMUST00000196180 91 ntBASIC5.38□□□□□ -1.55
Ccdc38Q8CDN8 Gm2011-203ENSMUST00000203750 435 ntBASIC5.38□□□□□ -1.55
Ccdc38Q8CDN8 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Ccdc38Q8CDN8 C430039J01Rik-201ENSMUST00000205973 957 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms