Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Gm20871-201ENSMUST00000191322 931 ntBASIC5.6□□□□□ -1.51
Atg4aQ8C9S8 Gm21865-202ENSMUST00000191443 923 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Atg4aQ8C9S8 Gm30737-201ENSMUST00000192683 923 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Atg4aQ8C9S8 Gm35134-201ENSMUST00000194086 923 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Atg4aQ8C9S8 Gm37095-201ENSMUST00000195421 205 ntBASIC5.6□□□□□ -1.51
Atg4aQ8C9S8 Gm43828-201ENSMUST00000196890 639 ntBASIC5.6□□□□□ -1.51
Atg4aQ8C9S8 Gm44253-201ENSMUST00000203387 628 ntBASIC5.6□□□□□ -1.51
Atg4aQ8C9S8 AC154828.2-201ENSMUST00000220908 1070 ntBASIC5.6□□□□□ -1.51
Atg4aQ8C9S8 Gm18442-201ENSMUST00000220925 639 ntBASIC5.6□□□□□ -1.51
Atg4aQ8C9S8 AC134439.2-201ENSMUST00000221950 467 ntBASIC5.6□□□□□ -1.51
Atg4aQ8C9S8 Olfr146-201ENSMUST00000073671 1061 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Atg4aQ8C9S8 Olfr881-201ENSMUST00000074611 948 ntBASIC5.6□□□□□ -1.51
Atg4aQ8C9S8 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Atg4aQ8C9S8 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Atg4aQ8C9S8 Olfr231-202ENSMUST00000214446 5204 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Atg4aQ8C9S8 Nptn-205ENSMUST00000176250 4531 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Atg4aQ8C9S8 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC5.6□□□□□ -1.51
Atg4aQ8C9S8 Olfr1186-203ENSMUST00000216978 1745 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Atg4aQ8C9S8 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Atg4aQ8C9S8 Gm42681-201ENSMUST00000197999 1611 ntBASIC5.59□□□□□ -1.51
Atg4aQ8C9S8 Olfr1283-202ENSMUST00000204064 1625 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Atg4aQ8C9S8 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Atg4aQ8C9S8 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.51
Atg4aQ8C9S8 Mlip-205ENSMUST00000183955 3069 ntAPPRIS P5 TSL 5 BASIC5.59□□□□□ -1.51
Atg4aQ8C9S8 Gm16794-201ENSMUST00000180727 2100 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Atg4aQ8C9S8 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC5.59□□□□□ -1.51
Atg4aQ8C9S8 Vmn2r-ps11-201ENSMUST00000176568 2730 ntBASIC5.59□□□□□ -1.51
Atg4aQ8C9S8 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Atg4aQ8C9S8 Olfr1353-203ENSMUST00000205193 1924 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Atg4aQ8C9S8 Scimp-202ENSMUST00000108534 1080 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Atg4aQ8C9S8 Gm13121-201ENSMUST00000120637 632 ntBASIC5.59□□□□□ -1.51
Atg4aQ8C9S8 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC5.59□□□□□ -1.51
Atg4aQ8C9S8 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC5.59□□□□□ -1.51
Atg4aQ8C9S8 Gm24507-201ENSMUST00000157683 134 ntBASIC5.59□□□□□ -1.51
Atg4aQ8C9S8 Gm25655-201ENSMUST00000158465 290 ntBASIC5.59□□□□□ -1.51
Atg4aQ8C9S8 Gm16589-201ENSMUST00000159522 918 ntBASIC5.59□□□□□ -1.51
Atg4aQ8C9S8 Gm28543-201ENSMUST00000188986 509 ntTSL 5 BASIC5.59□□□□□ -1.51
Atg4aQ8C9S8 Gm28701-201ENSMUST00000189778 1010 ntTSL 5 BASIC5.59□□□□□ -1.51
Atg4aQ8C9S8 Gm45007-201ENSMUST00000206237 366 ntBASIC5.59□□□□□ -1.51
Atg4aQ8C9S8 Gm45236-201ENSMUST00000208632 229 ntBASIC5.59□□□□□ -1.51
Atg4aQ8C9S8 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
Atg4aQ8C9S8 AC109180.1-201ENSMUST00000218676 398 ntBASIC5.59□□□□□ -1.51
Atg4aQ8C9S8 AC102435.1-205ENSMUST00000221064 1097 ntTSL 5 BASIC5.59□□□□□ -1.51
Atg4aQ8C9S8 AC153794.2-201ENSMUST00000222650 550 ntBASIC5.59□□□□□ -1.51
Atg4aQ8C9S8 AC131178.1-201ENSMUST00000228649 492 ntBASIC5.59□□□□□ -1.51
Atg4aQ8C9S8 AC122035.2-201ENSMUST00000228698 462 ntBASIC5.59□□□□□ -1.51
Atg4aQ8C9S8 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Atg4aQ8C9S8 Olfr855-201ENSMUST00000061693 992 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Atg4aQ8C9S8 Olfr741-201ENSMUST00000071932 936 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Atg4aQ8C9S8 Olfr68-201ENSMUST00000072513 948 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Atg4aQ8C9S8 Obp1b-201ENSMUST00000088198 797 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Atg4aQ8C9S8 Zfp352-201ENSMUST00000080541 1656 ntAPPRIS P1 BASIC5.59□□□□□ -1.52
Atg4aQ8C9S8 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC5.59□□□□□ -1.52
Atg4aQ8C9S8 Olfr1215-203ENSMUST00000216271 2608 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.52
Atg4aQ8C9S8 AC107232.1-201ENSMUST00000227785 1503 ntBASIC5.58□□□□□ -1.52
Atg4aQ8C9S8 Zfyve9-203ENSMUST00000106658 5987 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Atg4aQ8C9S8 Gm5373-202ENSMUST00000212931 2964 ntTSL 2 BASIC5.58□□□□□ -1.52
Atg4aQ8C9S8 AC163032.1-201ENSMUST00000220671 2970 ntBASIC5.58□□□□□ -1.52
Atg4aQ8C9S8 Gm37964-201ENSMUST00000192459 4905 ntBASIC5.58□□□□□ -1.52
Atg4aQ8C9S8 Gm42910-201ENSMUST00000198917 2921 ntBASIC5.58□□□□□ -1.52
Atg4aQ8C9S8 Spata1-206ENSMUST00000197980 1807 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Atg4aQ8C9S8 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Atg4aQ8C9S8 Hbp1-204ENSMUST00000175686 1315 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Atg4aQ8C9S8 Vmn2r17-201ENSMUST00000171841 2550 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Atg4aQ8C9S8 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC5.58□□□□□ -1.52
Atg4aQ8C9S8 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Atg4aQ8C9S8 Gm12287-201ENSMUST00000119770 707 ntBASIC5.58□□□□□ -1.52
Atg4aQ8C9S8 Vmn1r-ps102-201ENSMUST00000120663 886 ntBASIC5.58□□□□□ -1.52
Atg4aQ8C9S8 Gm14776-201ENSMUST00000121029 887 ntBASIC5.58□□□□□ -1.52
Atg4aQ8C9S8 Gm13745-201ENSMUST00000121994 527 ntBASIC5.58□□□□□ -1.52
Atg4aQ8C9S8 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Atg4aQ8C9S8 Gm22530-201ENSMUST00000158820 118 ntBASIC5.58□□□□□ -1.52
Atg4aQ8C9S8 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Atg4aQ8C9S8 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC5.58□□□□□ -1.52
Atg4aQ8C9S8 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Atg4aQ8C9S8 Gm38216-201ENSMUST00000194872 1214 ntBASIC5.58□□□□□ -1.52
Atg4aQ8C9S8 Gm38825-201ENSMUST00000204022 648 ntTSL 5 BASIC5.58□□□□□ -1.52
Atg4aQ8C9S8 Gm44523-201ENSMUST00000205616 417 ntBASIC5.58□□□□□ -1.52
Atg4aQ8C9S8 AC123705.4-202ENSMUST00000221602 697 ntTSL 2 BASIC5.58□□□□□ -1.52
Atg4aQ8C9S8 AC133283.1-201ENSMUST00000228443 859 ntBASIC5.58□□□□□ -1.52
Atg4aQ8C9S8 Olfr33-201ENSMUST00000084817 957 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Atg4aQ8C9S8 Gm10540-201ENSMUST00000097581 276 ntBASIC5.58□□□□□ -1.52
Atg4aQ8C9S8 Gm43329-201ENSMUST00000200120 3232 ntBASIC5.58□□□□□ -1.52
Atg4aQ8C9S8 Gm42843-201ENSMUST00000196328 3616 ntBASIC5.58□□□□□ -1.52
Atg4aQ8C9S8 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Atg4aQ8C9S8 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC5.58□□□□□ -1.52
Atg4aQ8C9S8 A230057D06Rik-203ENSMUST00000208953 3357 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Atg4aQ8C9S8 CT009733.2-202ENSMUST00000224171 4748 ntBASIC5.57□□□□□ -1.52
Atg4aQ8C9S8 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Atg4aQ8C9S8 Mga-201ENSMUST00000046717 11982 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Atg4aQ8C9S8 Gm23014-201ENSMUST00000104144 130 ntBASIC5.57□□□□□ -1.52
Atg4aQ8C9S8 Vmn1r-ps99-201ENSMUST00000120067 766 ntBASIC5.57□□□□□ -1.52
Atg4aQ8C9S8 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC5.57□□□□□ -1.52
Atg4aQ8C9S8 Gm23441-201ENSMUST00000157268 127 ntBASIC5.57□□□□□ -1.52
Atg4aQ8C9S8 Gm23496-201ENSMUST00000157741 248 ntBASIC5.57□□□□□ -1.52
Atg4aQ8C9S8 Gm23513-201ENSMUST00000158181 133 ntBASIC5.57□□□□□ -1.52
Atg4aQ8C9S8 Gm24636-201ENSMUST00000158673 288 ntBASIC5.57□□□□□ -1.52
Atg4aQ8C9S8 Gm7281-201ENSMUST00000160010 543 ntBASIC5.57□□□□□ -1.52
Atg4aQ8C9S8 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC5.57□□□□□ -1.52
Atg4aQ8C9S8 Faiml-201ENSMUST00000178051 785 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms