Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Vmn1r171-201ENSMUST00000078458 1581 ntAPPRIS P2 BASIC5.23□□□□□ -1.57
Ubfd1Q78JW9 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Ubfd1Q78JW9 CT025556.1-201ENSMUST00000222965 1884 ntBASIC5.23□□□□□ -1.57
Ubfd1Q78JW9 Olfr178-202ENSMUST00000206523 2095 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
Ubfd1Q78JW9 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
Ubfd1Q78JW9 Clca4b-201ENSMUST00000098549 2997 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Ubfd1Q78JW9 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC5.23□□□□□ -1.57
Ubfd1Q78JW9 AC124579.1-201ENSMUST00000223468 2520 ntBASIC5.23□□□□□ -1.57
Ubfd1Q78JW9 1700017N19Rik-203ENSMUST00000187119 1524 ntTSL 5 BASIC5.23□□□□□ -1.57
Ubfd1Q78JW9 Gm37762-201ENSMUST00000194515 3561 ntBASIC5.22□□□□□ -1.57
Ubfd1Q78JW9 Dach2-202ENSMUST00000113378 2089 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Ubfd1Q78JW9 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC5.22□□□□□ -1.57
Ubfd1Q78JW9 Gm44801-201ENSMUST00000207644 2060 ntBASIC5.22□□□□□ -1.57
Ubfd1Q78JW9 Olfr1131-202ENSMUST00000213302 1779 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Ubfd1Q78JW9 Zfp426-208ENSMUST00000166005 1653 ntAPPRIS P3 TSL 5 BASIC5.22□□□□□ -1.57
Ubfd1Q78JW9 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Ubfd1Q78JW9 AC124446.1-201ENSMUST00000221027 2644 ntBASIC5.22□□□□□ -1.57
Ubfd1Q78JW9 Gm44224-201ENSMUST00000204131 1463 ntBASIC5.22□□□□□ -1.57
Ubfd1Q78JW9 Gm7451-201ENSMUST00000208382 1392 ntBASIC5.22□□□□□ -1.57
Ubfd1Q78JW9 Defb47-201ENSMUST00000100492 359 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Ubfd1Q78JW9 Gm14512-201ENSMUST00000117924 230 ntBASIC5.22□□□□□ -1.57
Ubfd1Q78JW9 Gm14388-201ENSMUST00000118119 477 ntBASIC5.22□□□□□ -1.57
Ubfd1Q78JW9 Mup-ps14-201ENSMUST00000118437 532 ntBASIC5.22□□□□□ -1.57
Ubfd1Q78JW9 Gm14795-201ENSMUST00000118461 471 ntBASIC5.22□□□□□ -1.57
Ubfd1Q78JW9 Mup-ps10-201ENSMUST00000119626 556 ntBASIC5.22□□□□□ -1.57
Ubfd1Q78JW9 Gm11369-201ENSMUST00000120812 318 ntBASIC5.22□□□□□ -1.57
Ubfd1Q78JW9 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC5.22□□□□□ -1.57
Ubfd1Q78JW9 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC5.22□□□□□ -1.57
Ubfd1Q78JW9 Gm14979-201ENSMUST00000121561 1035 ntBASIC5.22□□□□□ -1.57
Ubfd1Q78JW9 Gm23792-201ENSMUST00000122557 93 ntBASIC5.22□□□□□ -1.57
Ubfd1Q78JW9 Gm24768-201ENSMUST00000158512 94 ntBASIC5.22□□□□□ -1.57
Ubfd1Q78JW9 Gm22529-201ENSMUST00000158817 123 ntBASIC5.22□□□□□ -1.57
Ubfd1Q78JW9 Ear-ps7-201ENSMUST00000161287 442 ntBASIC5.22□□□□□ -1.57
Ubfd1Q78JW9 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC5.22□□□□□ -1.57
Ubfd1Q78JW9 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Ubfd1Q78JW9 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC5.22□□□□□ -1.57
Ubfd1Q78JW9 Gm4617-201ENSMUST00000178993 331 ntBASIC5.22□□□□□ -1.57
Ubfd1Q78JW9 Gm22252-201ENSMUST00000179316 79 ntBASIC5.22□□□□□ -1.57
Ubfd1Q78JW9 Gm24969-201ENSMUST00000180331 79 ntBASIC5.22□□□□□ -1.57
Ubfd1Q78JW9 Gm16794-201ENSMUST00000180727 2100 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Ubfd1Q78JW9 Mir6412-201ENSMUST00000184477 97 ntBASIC5.22□□□□□ -1.57
Ubfd1Q78JW9 Gm29329-201ENSMUST00000189053 621 ntTSL 5 BASIC5.22□□□□□ -1.57
Ubfd1Q78JW9 Gm28061-201ENSMUST00000189085 807 ntBASIC5.22□□□□□ -1.57
Ubfd1Q78JW9 Gm28331-201ENSMUST00000191102 621 ntTSL 5 BASIC5.22□□□□□ -1.57
Ubfd1Q78JW9 Gm37401-201ENSMUST00000192053 347 ntTSL 5 BASIC5.22□□□□□ -1.57
Ubfd1Q78JW9 Gm34176-201ENSMUST00000192621 474 ntBASIC5.22□□□□□ -1.57
Ubfd1Q78JW9 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC5.22□□□□□ -1.57
Ubfd1Q78JW9 Igkv13-61-1-201ENSMUST00000198255 296 ntBASIC5.22□□□□□ -1.57
Ubfd1Q78JW9 Gm44134-201ENSMUST00000203064 661 ntTSL 2 BASIC5.22□□□□□ -1.57
Ubfd1Q78JW9 Gm44006-201ENSMUST00000204273 396 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Ubfd1Q78JW9 Gm36864-201ENSMUST00000205530 684 ntAPPRIS ALT2 TSL 3 BASIC5.22□□□□□ -1.57
Ubfd1Q78JW9 AC134537.2-201ENSMUST00000217770 575 ntBASIC5.22□□□□□ -1.57
Ubfd1Q78JW9 AC139638.1-201ENSMUST00000218027 364 ntBASIC5.22□□□□□ -1.57
Ubfd1Q78JW9 AC160863.2-201ENSMUST00000218392 858 ntTSL 5 BASIC5.22□□□□□ -1.57
Ubfd1Q78JW9 Gm9973-202ENSMUST00000220926 166 ntBASIC5.22□□□□□ -1.57
Ubfd1Q78JW9 AC170999.2-201ENSMUST00000226223 264 ntBASIC5.22□□□□□ -1.57
Ubfd1Q78JW9 Gmfg-201ENSMUST00000078845 637 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Ubfd1Q78JW9 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Ubfd1Q78JW9 Olfr1000-201ENSMUST00000099921 945 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Ubfd1Q78JW9 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Ubfd1Q78JW9 Olfr536-201ENSMUST00000064392 3853 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Ubfd1Q78JW9 Gm43027-201ENSMUST00000202906 3691 ntBASIC5.22□□□□□ -1.57
Ubfd1Q78JW9 Kat6b-ps2-201ENSMUST00000188339 1600 ntBASIC5.22□□□□□ -1.57
Ubfd1Q78JW9 Gm37051-201ENSMUST00000194535 2943 ntBASIC5.22□□□□□ -1.57
Ubfd1Q78JW9 Gm10727-201ENSMUST00000197107 1602 ntBASIC5.22□□□□□ -1.57
Ubfd1Q78JW9 AC124569.3-201ENSMUST00000224860 1621 ntBASIC5.22□□□□□ -1.57
Ubfd1Q78JW9 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Ubfd1Q78JW9 Ogt-202ENSMUST00000119299 3840 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
Ubfd1Q78JW9 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Ubfd1Q78JW9 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Ubfd1Q78JW9 4930402F11Rik-204ENSMUST00000208612 1405 ntTSL 5 BASIC5.22□□□□□ -1.57
Ubfd1Q78JW9 Olfr668-202ENSMUST00000215359 3613 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Ubfd1Q78JW9 Trim30e-ps1-201ENSMUST00000147064 1890 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Ubfd1Q78JW9 Pkhd1-201ENSMUST00000088448 12935 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Ubfd1Q78JW9 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
Ubfd1Q78JW9 Vmn2r-ps38-201ENSMUST00000173752 2573 ntBASIC5.21□□□□□ -1.57
Ubfd1Q78JW9 Gm21693-202ENSMUST00000186047 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Ubfd1Q78JW9 Gm3376-202ENSMUST00000186140 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Ubfd1Q78JW9 Gm21704-202ENSMUST00000187277 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Ubfd1Q78JW9 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Ubfd1Q78JW9 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
Ubfd1Q78JW9 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC5.21□□□□□ -1.57
Ubfd1Q78JW9 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC5.21□□□□□ -1.58
Ubfd1Q78JW9 A730081D07Rik-201ENSMUST00000153685 1804 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Ubfd1Q78JW9 Olfr1305-202ENSMUST00000213405 1815 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Ubfd1Q78JW9 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Ubfd1Q78JW9 Zfp11-201ENSMUST00000049778 3929 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Ubfd1Q78JW9 Mir669p-2-201ENSMUST00000103868 87 ntBASIC5.21□□□□□ -1.58
Ubfd1Q78JW9 Mir669p-1-201ENSMUST00000103884 87 ntBASIC5.21□□□□□ -1.58
Ubfd1Q78JW9 Gm24350-201ENSMUST00000104163 133 ntBASIC5.21□□□□□ -1.58
Ubfd1Q78JW9 Gm14082-201ENSMUST00000118582 801 ntBASIC5.21□□□□□ -1.58
Ubfd1Q78JW9 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC5.21□□□□□ -1.58
Ubfd1Q78JW9 Gm13459-201ENSMUST00000121558 646 ntBASIC5.21□□□□□ -1.58
Ubfd1Q78JW9 Gm13471-201ENSMUST00000122057 433 ntBASIC5.21□□□□□ -1.58
Ubfd1Q78JW9 Gm15116-201ENSMUST00000122248 663 ntBASIC5.21□□□□□ -1.58
Ubfd1Q78JW9 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Ubfd1Q78JW9 Gm22160-201ENSMUST00000158405 328 ntBASIC5.21□□□□□ -1.58
Ubfd1Q78JW9 Gm23773-201ENSMUST00000158985 296 ntBASIC5.21□□□□□ -1.58
Ubfd1Q78JW9 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
Ubfd1Q78JW9 Fabp7-202ENSMUST00000165013 880 ntTSL 2 BASIC5.21□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms