Protein–RNA interactions for Protein: Q6PAV2

Herc4, Probable E3 ubiquitin-protein ligase HERC4, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4Q6PAV2 1700003G18Rik-202ENSMUST00000150518 312 ntTSL 3 BASIC5.21□□□□□ -1.58
Herc4Q6PAV2 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Herc4Q6PAV2 Vmn1r-ps45-201ENSMUST00000174106 955 ntBASIC5.21□□□□□ -1.58
Herc4Q6PAV2 Gm9457-201ENSMUST00000180176 372 ntBASIC5.21□□□□□ -1.58
Herc4Q6PAV2 Gm21971-201ENSMUST00000180187 337 ntTSL 5 BASIC5.21□□□□□ -1.58
Herc4Q6PAV2 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Herc4Q6PAV2 Gm28803-201ENSMUST00000190385 764 ntBASIC5.21□□□□□ -1.58
Herc4Q6PAV2 Gm29332-201ENSMUST00000190829 227 ntBASIC5.21□□□□□ -1.58
Herc4Q6PAV2 Gm37720-201ENSMUST00000195497 1241 ntBASIC5.21□□□□□ -1.58
Herc4Q6PAV2 Gm20239-201ENSMUST00000196610 982 ntBASIC5.21□□□□□ -1.58
Herc4Q6PAV2 Gm43018-201ENSMUST00000198075 1275 ntBASIC5.21□□□□□ -1.58
Herc4Q6PAV2 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
Herc4Q6PAV2 Gm43631-201ENSMUST00000202011 369 ntBASIC5.21□□□□□ -1.58
Herc4Q6PAV2 Gm32308-201ENSMUST00000203053 280 ntBASIC5.21□□□□□ -1.58
Herc4Q6PAV2 Gm4290-201ENSMUST00000206897 814 ntBASIC5.21□□□□□ -1.58
Herc4Q6PAV2 Supt4b-201ENSMUST00000214434 351 ntBASIC5.21□□□□□ -1.58
Herc4Q6PAV2 Olfr1092-ps1-201ENSMUST00000216544 398 ntBASIC5.21□□□□□ -1.58
Herc4Q6PAV2 AC132384.6-201ENSMUST00000218976 1206 ntBASIC5.21□□□□□ -1.58
Herc4Q6PAV2 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Herc4Q6PAV2 AC163721.1-201ENSMUST00000222669 394 ntTSL 3 BASIC5.21□□□□□ -1.58
Herc4Q6PAV2 Snora52-201ENSMUST00000082732 137 ntBASIC5.21□□□□□ -1.58
Herc4Q6PAV2 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Herc4Q6PAV2 Gm42494-201ENSMUST00000196515 3051 ntBASIC5.21□□□□□ -1.58
Herc4Q6PAV2 Olfr690-202ENSMUST00000211006 2048 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
Herc4Q6PAV2 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC5.21□□□□□ -1.58
Herc4Q6PAV2 AC127371.2-201ENSMUST00000228108 1933 ntBASIC5.21□□□□□ -1.58
Herc4Q6PAV2 AC162938.2-205ENSMUST00000217551 2828 ntBASIC5.2□□□□□ -1.58
Herc4Q6PAV2 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Herc4Q6PAV2 Olfr685-204ENSMUST00000217432 3246 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Herc4Q6PAV2 Glcci1-206ENSMUST00000162567 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Herc4Q6PAV2 Fcrl5-201ENSMUST00000049926 1791 ntAPPRIS P4 TSL 5 BASIC5.2□□□□□ -1.58
Herc4Q6PAV2 Gm12231-201ENSMUST00000119447 695 ntBASIC5.2□□□□□ -1.58
Herc4Q6PAV2 Gm12287-201ENSMUST00000119770 707 ntBASIC5.2□□□□□ -1.58
Herc4Q6PAV2 Gm13924-201ENSMUST00000119899 486 ntBASIC5.2□□□□□ -1.58
Herc4Q6PAV2 Gm14619-201ENSMUST00000120480 168 ntBASIC5.2□□□□□ -1.58
Herc4Q6PAV2 Gm14003-201ENSMUST00000130919 313 ntTSL 3 BASIC5.2□□□□□ -1.58
Herc4Q6PAV2 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Herc4Q6PAV2 Gm26098-201ENSMUST00000157247 288 ntBASIC5.2□□□□□ -1.58
Herc4Q6PAV2 Gm22819-201ENSMUST00000157445 303 ntBASIC5.2□□□□□ -1.58
Herc4Q6PAV2 Mir1946b-201ENSMUST00000157853 133 ntBASIC5.2□□□□□ -1.58
Herc4Q6PAV2 Gm26355-201ENSMUST00000158220 105 ntBASIC5.2□□□□□ -1.58
Herc4Q6PAV2 Gm8356-202ENSMUST00000164917 984 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Herc4Q6PAV2 Gm22923-201ENSMUST00000174952 110 ntBASIC5.2□□□□□ -1.58
Herc4Q6PAV2 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC5.2□□□□□ -1.58
Herc4Q6PAV2 Gm28060-201ENSMUST00000191554 189 ntBASIC5.2□□□□□ -1.58
Herc4Q6PAV2 Gm43350-201ENSMUST00000196382 711 ntBASIC5.2□□□□□ -1.58
Herc4Q6PAV2 Gm18985-201ENSMUST00000196472 1079 ntBASIC5.2□□□□□ -1.58
Herc4Q6PAV2 Obox4-ps32-201ENSMUST00000196512 537 ntBASIC5.2□□□□□ -1.58
Herc4Q6PAV2 Gm44485-201ENSMUST00000199569 137 ntBASIC5.2□□□□□ -1.58
Herc4Q6PAV2 Gm20997-201ENSMUST00000205148 231 ntBASIC5.2□□□□□ -1.58
Herc4Q6PAV2 Gm20074-201ENSMUST00000208144 484 ntBASIC5.2□□□□□ -1.58
Herc4Q6PAV2 Gm44919-201ENSMUST00000208587 1073 ntBASIC5.2□□□□□ -1.58
Herc4Q6PAV2 4930518J21Rik-201ENSMUST00000209557 573 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Herc4Q6PAV2 AC172027.1-201ENSMUST00000217659 337 ntBASIC5.2□□□□□ -1.58
Herc4Q6PAV2 AC158803.3-201ENSMUST00000220024 211 ntBASIC5.2□□□□□ -1.58
Herc4Q6PAV2 AC151902.1-201ENSMUST00000227800 375 ntBASIC5.2□□□□□ -1.58
Herc4Q6PAV2 Olfr135-201ENSMUST00000076245 1079 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Herc4Q6PAV2 Gm22971-201ENSMUST00000083305 97 ntBASIC5.2□□□□□ -1.58
Herc4Q6PAV2 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
Herc4Q6PAV2 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC5.2□□□□□ -1.58
Herc4Q6PAV2 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Herc4Q6PAV2 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Herc4Q6PAV2 Gm21704-201ENSMUST00000169382 1573 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Herc4Q6PAV2 Rbmy-202ENSMUST00000171534 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Herc4Q6PAV2 Gm4064-201ENSMUST00000187482 1561 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Herc4Q6PAV2 Gm21708-202ENSMUST00000188091 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Herc4Q6PAV2 Gm10256-203ENSMUST00000189964 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Herc4Q6PAV2 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Herc4Q6PAV2 Gm17131-201ENSMUST00000164420 3846 ntBASIC5.2□□□□□ -1.58
Herc4Q6PAV2 AC155805.1-201ENSMUST00000222419 3808 ntBASIC5.2□□□□□ -1.58
Herc4Q6PAV2 Fgf7-201ENSMUST00000064794 2672 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Herc4Q6PAV2 Olfr270-204ENSMUST00000215127 3145 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
Herc4Q6PAV2 Brcc3-202ENSMUST00000114074 2473 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Herc4Q6PAV2 Skint11-204ENSMUST00000164297 1393 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Herc4Q6PAV2 Olfr884-202ENSMUST00000181088 3185 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
Herc4Q6PAV2 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
Herc4Q6PAV2 Slco1b2-201ENSMUST00000042812 3307 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Herc4Q6PAV2 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Herc4Q6PAV2 Foxr2-201ENSMUST00000096265 3210 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Herc4Q6PAV2 Gm19176-201ENSMUST00000222149 1831 ntBASIC5.19□□□□□ -1.58
Herc4Q6PAV2 Gm24124-201ENSMUST00000104103 132 ntBASIC5.19□□□□□ -1.58
Herc4Q6PAV2 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Herc4Q6PAV2 Pdcl2-202ENSMUST00000122213 1049 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Herc4Q6PAV2 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC5.19□□□□□ -1.58
Herc4Q6PAV2 Gm12909-201ENSMUST00000134190 620 ntTSL 2 BASIC5.19□□□□□ -1.58
Herc4Q6PAV2 Gm25669-201ENSMUST00000157699 112 ntBASIC5.19□□□□□ -1.58
Herc4Q6PAV2 Gm24188-201ENSMUST00000157980 108 ntBASIC5.19□□□□□ -1.58
Herc4Q6PAV2 Gm24217-201ENSMUST00000158260 133 ntBASIC5.19□□□□□ -1.58
Herc4Q6PAV2 Vmn1r155-201ENSMUST00000177632 924 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Herc4Q6PAV2 Vmn1r137-201ENSMUST00000177884 924 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Herc4Q6PAV2 Vmn1r130-201ENSMUST00000177936 924 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Herc4Q6PAV2 Vmn1r107-201ENSMUST00000179079 924 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Herc4Q6PAV2 Vmn1r165-201ENSMUST00000179594 924 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Herc4Q6PAV2 1600010M07Rik-201ENSMUST00000185931 1204 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Herc4Q6PAV2 Gm3145-201ENSMUST00000188584 220 ntBASIC5.19□□□□□ -1.58
Herc4Q6PAV2 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Herc4Q6PAV2 Gm37996-201ENSMUST00000191859 367 ntBASIC5.19□□□□□ -1.58
Herc4Q6PAV2 Gm36638-201ENSMUST00000193295 400 ntBASIC5.19□□□□□ -1.58
Herc4Q6PAV2 Gm18752-202ENSMUST00000193627 587 ntTSL 3 BASIC5.19□□□□□ -1.58
Herc4Q6PAV2 Gm5284-201ENSMUST00000199053 903 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 134 ms