Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Gm37244-201ENSMUST00000191748 1981 ntBASIC5.39□□□□□ -1.55
Ccdc88aQ5SNZ0 Gm44224-201ENSMUST00000204131 1463 ntBASIC5.39□□□□□ -1.55
Ccdc88aQ5SNZ0 Slamf6-207ENSMUST00000195656 5729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Ccdc88aQ5SNZ0 Olfr1016-203ENSMUST00000217410 2738 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
Ccdc88aQ5SNZ0 Slamf7-203ENSMUST00000192195 3975 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
Ccdc88aQ5SNZ0 Gm43282-201ENSMUST00000201848 2157 ntBASIC5.39□□□□□ -1.55
Ccdc88aQ5SNZ0 Gm37140-201ENSMUST00000192914 1684 ntBASIC5.39□□□□□ -1.55
Ccdc88aQ5SNZ0 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC5.39□□□□□ -1.55
Ccdc88aQ5SNZ0 Naalad2-207ENSMUST00000172171 4066 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Ccdc88aQ5SNZ0 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Ccdc88aQ5SNZ0 Stag2-203ENSMUST00000115073 6171 ntTSL 5 BASIC5.39□□□□□ -1.55
Ccdc88aQ5SNZ0 Gm12897-201ENSMUST00000120341 250 ntBASIC5.39□□□□□ -1.55
Ccdc88aQ5SNZ0 Gm13932-201ENSMUST00000120873 610 ntBASIC5.39□□□□□ -1.55
Ccdc88aQ5SNZ0 Gm12609-201ENSMUST00000129908 610 ntTSL 2 BASIC5.39□□□□□ -1.55
Ccdc88aQ5SNZ0 Gm25923-201ENSMUST00000158312 138 ntBASIC5.39□□□□□ -1.55
Ccdc88aQ5SNZ0 Gm16055-201ENSMUST00000161366 626 ntTSL 2 BASIC5.39□□□□□ -1.55
Ccdc88aQ5SNZ0 Gm13249-201ENSMUST00000177803 345 ntBASIC5.39□□□□□ -1.55
Ccdc88aQ5SNZ0 Mir713-201ENSMUST00000178651 108 ntBASIC5.39□□□□□ -1.55
Ccdc88aQ5SNZ0 Gm13144-201ENSMUST00000179385 345 ntBASIC5.39□□□□□ -1.55
Ccdc88aQ5SNZ0 Mir7047-201ENSMUST00000184595 64 ntBASIC5.39□□□□□ -1.55
Ccdc88aQ5SNZ0 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC5.39□□□□□ -1.55
Ccdc88aQ5SNZ0 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Ccdc88aQ5SNZ0 Gm45539-201ENSMUST00000210313 428 ntBASIC5.39□□□□□ -1.55
Ccdc88aQ5SNZ0 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Ccdc88aQ5SNZ0 AC133207.3-201ENSMUST00000217694 464 ntTSL 3 BASIC5.39□□□□□ -1.55
Ccdc88aQ5SNZ0 Gm46998-201ENSMUST00000221444 330 ntBASIC5.39□□□□□ -1.55
Ccdc88aQ5SNZ0 Olfr310-201ENSMUST00000081918 1082 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Ccdc88aQ5SNZ0 Gm23927-201ENSMUST00000082466 215 ntBASIC5.39□□□□□ -1.55
Ccdc88aQ5SNZ0 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Ccdc88aQ5SNZ0 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
Ccdc88aQ5SNZ0 Pde1a-204ENSMUST00000102653 2439 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Ccdc88aQ5SNZ0 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Ccdc88aQ5SNZ0 Gm10352-201ENSMUST00000166474 1482 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Ccdc88aQ5SNZ0 CT009734.1-201ENSMUST00000227657 1687 ntBASIC5.38□□□□□ -1.55
Ccdc88aQ5SNZ0 Adam24-201ENSMUST00000051614 2887 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Ccdc88aQ5SNZ0 Gm2309-201ENSMUST00000149994 1941 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Ccdc88aQ5SNZ0 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
Ccdc88aQ5SNZ0 Gm37143-201ENSMUST00000195180 3259 ntBASIC5.38□□□□□ -1.55
Ccdc88aQ5SNZ0 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
Ccdc88aQ5SNZ0 Zfp442-201ENSMUST00000109916 2922 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Ccdc88aQ5SNZ0 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC5.38□□□□□ -1.55
Ccdc88aQ5SNZ0 Olfr487-202ENSMUST00000216489 3785 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Ccdc88aQ5SNZ0 Gm14845-201ENSMUST00000121259 306 ntBASIC5.38□□□□□ -1.55
Ccdc88aQ5SNZ0 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Ccdc88aQ5SNZ0 Gm24774-201ENSMUST00000157384 134 ntBASIC5.38□□□□□ -1.55
Ccdc88aQ5SNZ0 Gm37659-201ENSMUST00000194574 111 ntBASIC5.38□□□□□ -1.55
Ccdc88aQ5SNZ0 AC154296.3-201ENSMUST00000214427 712 ntBASIC5.38□□□□□ -1.55
Ccdc88aQ5SNZ0 Rps27a-ps2-201ENSMUST00000078766 467 ntBASIC5.38□□□□□ -1.55
Ccdc88aQ5SNZ0 Gm6065-201ENSMUST00000081336 492 ntBASIC5.38□□□□□ -1.55
Ccdc88aQ5SNZ0 Mir323-201ENSMUST00000083683 86 ntBASIC5.38□□□□□ -1.55
Ccdc88aQ5SNZ0 Ceacam11-201ENSMUST00000094799 1054 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Ccdc88aQ5SNZ0 Gm6043-201ENSMUST00000099961 492 ntBASIC5.38□□□□□ -1.55
Ccdc88aQ5SNZ0 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Ccdc88aQ5SNZ0 1700017N19Rik-203ENSMUST00000187119 1524 ntTSL 5 BASIC5.38□□□□□ -1.55
Ccdc88aQ5SNZ0 4930421C12Rik-201ENSMUST00000200814 1574 ntBASIC5.38□□□□□ -1.55
Ccdc88aQ5SNZ0 Gm42704-201ENSMUST00000196875 1778 ntBASIC5.38□□□□□ -1.55
Ccdc88aQ5SNZ0 Hyal5-201ENSMUST00000031689 1838 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Ccdc88aQ5SNZ0 Btbd35f21-201ENSMUST00000105017 1943 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Ccdc88aQ5SNZ0 Btbd35f16-201ENSMUST00000185755 1949 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Ccdc88aQ5SNZ0 Nlrp4a-202ENSMUST00000119386 3215 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Ccdc88aQ5SNZ0 Vmn2r7-202ENSMUST00000161972 3583 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Ccdc88aQ5SNZ0 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Ccdc88aQ5SNZ0 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Ccdc88aQ5SNZ0 Gm7451-201ENSMUST00000208382 1392 ntBASIC5.37□□□□□ -1.55
Ccdc88aQ5SNZ0 Gm24581-201ENSMUST00000103962 133 ntBASIC5.37□□□□□ -1.55
Ccdc88aQ5SNZ0 Xlr5d-ps-201ENSMUST00000117501 782 ntBASIC5.37□□□□□ -1.55
Ccdc88aQ5SNZ0 Gm15012-201ENSMUST00000119176 106 ntBASIC5.37□□□□□ -1.55
Ccdc88aQ5SNZ0 Gm14587-201ENSMUST00000121714 658 ntBASIC5.37□□□□□ -1.55
Ccdc88aQ5SNZ0 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC5.37□□□□□ -1.55
Ccdc88aQ5SNZ0 Gm24751-201ENSMUST00000157844 102 ntBASIC5.37□□□□□ -1.55
Ccdc88aQ5SNZ0 Gm30280-201ENSMUST00000192214 262 ntBASIC5.37□□□□□ -1.55
Ccdc88aQ5SNZ0 Gm43405-201ENSMUST00000198642 337 ntBASIC5.37□□□□□ -1.55
Ccdc88aQ5SNZ0 Gm45845-201ENSMUST00000207326 582 ntBASIC5.37□□□□□ -1.55
Ccdc88aQ5SNZ0 Gm44993-201ENSMUST00000208435 842 ntTSL 3 BASIC5.37□□□□□ -1.55
Ccdc88aQ5SNZ0 AC153532.2-201ENSMUST00000219753 3844 ntBASIC5.37□□□□□ -1.55
Ccdc88aQ5SNZ0 AC154742.1-201ENSMUST00000223477 573 ntTSL 5 BASIC5.37□□□□□ -1.55
Ccdc88aQ5SNZ0 Olfr202-201ENSMUST00000049859 924 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Ccdc88aQ5SNZ0 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
Ccdc88aQ5SNZ0 Olfr18-201ENSMUST00000086473 1156 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Ccdc88aQ5SNZ0 Olfr1297-201ENSMUST00000099612 939 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Ccdc88aQ5SNZ0 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Ccdc88aQ5SNZ0 Olfr1195-202ENSMUST00000213545 2585 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Ccdc88aQ5SNZ0 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
Ccdc88aQ5SNZ0 Olfr824-202ENSMUST00000214192 3862 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Ccdc88aQ5SNZ0 Olfr446-202ENSMUST00000215369 4399 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Ccdc88aQ5SNZ0 Olfr457-203ENSMUST00000204324 4275 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
Ccdc88aQ5SNZ0 2610044O15Rik8-205ENSMUST00000190157 1776 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Ccdc88aQ5SNZ0 Cfap61-207ENSMUST00000138774 3308 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Ccdc88aQ5SNZ0 AC131743.1-201ENSMUST00000222138 4024 ntBASIC5.37□□□□□ -1.55
Ccdc88aQ5SNZ0 Vmn1r201-202ENSMUST00000226330 4770 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Ccdc88aQ5SNZ0 Gm1866-201ENSMUST00000120701 477 ntBASIC5.37□□□□□ -1.55
Ccdc88aQ5SNZ0 Mup-ps17-201ENSMUST00000120723 218 ntBASIC5.37□□□□□ -1.55
Ccdc88aQ5SNZ0 n-R5s201-201ENSMUST00000122622 116 ntBASIC5.37□□□□□ -1.55
Ccdc88aQ5SNZ0 Gm22326-201ENSMUST00000158897 351 ntBASIC5.37□□□□□ -1.55
Ccdc88aQ5SNZ0 Gm18828-202ENSMUST00000181035 310 ntBASIC5.37□□□□□ -1.55
Ccdc88aQ5SNZ0 Gm27414-201ENSMUST00000185033 381 ntBASIC5.37□□□□□ -1.55
Ccdc88aQ5SNZ0 Gm28269-201ENSMUST00000189511 559 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
Ccdc88aQ5SNZ0 Gm19774-201ENSMUST00000190667 114 ntBASIC5.37□□□□□ -1.55
Ccdc88aQ5SNZ0 Gm44474-201ENSMUST00000196525 127 ntBASIC5.37□□□□□ -1.55
Ccdc88aQ5SNZ0 Gm21320-201ENSMUST00000211875 861 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 151.6 ms