Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Gm13484-201ENSMUST00000120738 412 ntBASIC5.77□□□□□ -1.49
Shank3Q4ACU6 Gm25999-201ENSMUST00000175398 133 ntBASIC5.77□□□□□ -1.49
Shank3Q4ACU6 Gm19774-201ENSMUST00000190667 114 ntBASIC5.77□□□□□ -1.49
Shank3Q4ACU6 Gm37505-201ENSMUST00000195670 461 ntTSL 5 BASIC5.77□□□□□ -1.49
Shank3Q4ACU6 Gm18452-201ENSMUST00000202968 1111 ntBASIC5.77□□□□□ -1.49
Shank3Q4ACU6 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC5.77□□□□□ -1.49
Shank3Q4ACU6 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC5.77□□□□□ -1.49
Shank3Q4ACU6 Ssxb3-201ENSMUST00000089374 824 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Shank3Q4ACU6 Olfr338-202ENSMUST00000091006 921 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Shank3Q4ACU6 Olfr1208-201ENSMUST00000099810 1075 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Shank3Q4ACU6 Plch1-206ENSMUST00000159676 6560 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Shank3Q4ACU6 Rsph4a-201ENSMUST00000169670 3650 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Shank3Q4ACU6 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Shank3Q4ACU6 AA792892-201ENSMUST00000097477 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Shank3Q4ACU6 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Shank3Q4ACU6 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Shank3Q4ACU6 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Shank3Q4ACU6 Gm37668-201ENSMUST00000193745 1944 ntBASIC5.76□□□□□ -1.49
Shank3Q4ACU6 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Shank3Q4ACU6 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Shank3Q4ACU6 AC144772.3-201ENSMUST00000228829 3126 ntBASIC5.76□□□□□ -1.49
Shank3Q4ACU6 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC5.76□□□□□ -1.49
Shank3Q4ACU6 Ugt1a7c-202ENSMUST00000113135 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Shank3Q4ACU6 Vmn1r213-202ENSMUST00000227573 3515 ntAPPRIS ALT2 BASIC5.76□□□□□ -1.49
Shank3Q4ACU6 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Shank3Q4ACU6 Gm7988-201ENSMUST00000196623 2297 ntBASIC5.76□□□□□ -1.49
Shank3Q4ACU6 Gm43638-201ENSMUST00000201519 2297 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Shank3Q4ACU6 Gm5757-201ENSMUST00000117494 528 ntBASIC5.76□□□□□ -1.49
Shank3Q4ACU6 Gm24224-201ENSMUST00000158828 258 ntBASIC5.76□□□□□ -1.49
Shank3Q4ACU6 Gm7876-201ENSMUST00000169465 984 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
Shank3Q4ACU6 Gm20657-201ENSMUST00000177079 515 ntBASIC5.76□□□□□ -1.49
Shank3Q4ACU6 Gm43390-201ENSMUST00000196614 421 ntBASIC5.76□□□□□ -1.49
Shank3Q4ACU6 Gm44054-201ENSMUST00000203814 372 ntBASIC5.76□□□□□ -1.49
Shank3Q4ACU6 Olfr1496-203ENSMUST00000219412 1067 ntAPPRIS P2 BASIC5.76□□□□□ -1.49
Shank3Q4ACU6 Olfr1496-201ENSMUST00000057390 1067 ntAPPRIS ALT1 BASIC5.76□□□□□ -1.49
Shank3Q4ACU6 Vmn1r215-201ENSMUST00000072972 1048 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Shank3Q4ACU6 n-R5s162-201ENSMUST00000082581 119 ntBASIC5.76□□□□□ -1.49
Shank3Q4ACU6 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC5.76□□□□□ -1.49
Shank3Q4ACU6 Olfr922-202ENSMUST00000213164 4028 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Shank3Q4ACU6 Psg-ps1-202ENSMUST00000206181 1943 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Shank3Q4ACU6 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Shank3Q4ACU6 Huwe1-201ENSMUST00000026292 14579 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Shank3Q4ACU6 Gm43871-201ENSMUST00000204931 1955 ntBASIC5.75□□□□□ -1.49
Shank3Q4ACU6 Olfr1331-203ENSMUST00000216589 3139 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Shank3Q4ACU6 Tmem167-203ENSMUST00000161568 8689 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Shank3Q4ACU6 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC5.75□□□□□ -1.49
Shank3Q4ACU6 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Shank3Q4ACU6 Gm24376-201ENSMUST00000104399 127 ntBASIC5.75□□□□□ -1.49
Shank3Q4ACU6 Znrd1-201ENSMUST00000113669 742 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Shank3Q4ACU6 Zfp389-201ENSMUST00000118425 675 ntBASIC5.75□□□□□ -1.49
Shank3Q4ACU6 Gm14103-201ENSMUST00000119075 366 ntBASIC5.75□□□□□ -1.49
Shank3Q4ACU6 Gm22588-201ENSMUST00000157510 140 ntBASIC5.75□□□□□ -1.49
Shank3Q4ACU6 Scgb2b6-201ENSMUST00000188132 330 ntBASIC5.75□□□□□ -1.49
Shank3Q4ACU6 AC140344.1-201ENSMUST00000223384 387 ntBASIC5.75□□□□□ -1.49
Shank3Q4ACU6 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Shank3Q4ACU6 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Shank3Q4ACU6 AC122263.1-201ENSMUST00000228636 2805 ntBASIC5.75□□□□□ -1.49
Shank3Q4ACU6 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Shank3Q4ACU6 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Shank3Q4ACU6 Adam24-201ENSMUST00000051614 2887 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Shank3Q4ACU6 Arhgef12-201ENSMUST00000072767 10059 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Shank3Q4ACU6 Olfr1260-202ENSMUST00000111512 4226 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
Shank3Q4ACU6 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Shank3Q4ACU6 Olfr893-202ENSMUST00000211975 2924 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Shank3Q4ACU6 Olfr1043-202ENSMUST00000213886 1675 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Shank3Q4ACU6 Chil6-201ENSMUST00000029510 1668 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Shank3Q4ACU6 Gm26146-201ENSMUST00000104478 185 ntBASIC5.74□□□□□ -1.49
Shank3Q4ACU6 Gm12813-201ENSMUST00000119615 902 ntBASIC5.74□□□□□ -1.49
Shank3Q4ACU6 Gm11742-201ENSMUST00000119903 233 ntBASIC5.74□□□□□ -1.49
Shank3Q4ACU6 Gm12340-201ENSMUST00000121617 462 ntBASIC5.74□□□□□ -1.49
Shank3Q4ACU6 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Shank3Q4ACU6 Gm23168-201ENSMUST00000157156 143 ntBASIC5.74□□□□□ -1.49
Shank3Q4ACU6 Gm25846-201ENSMUST00000158013 135 ntBASIC5.74□□□□□ -1.49
Shank3Q4ACU6 1700109K24Rik-201ENSMUST00000181870 1045 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Shank3Q4ACU6 Gm27189-201ENSMUST00000184119 190 ntBASIC5.74□□□□□ -1.49
Shank3Q4ACU6 Gm28709-201ENSMUST00000186967 456 ntTSL 5 BASIC5.74□□□□□ -1.49
Shank3Q4ACU6 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC5.74□□□□□ -1.49
Shank3Q4ACU6 Gm44583-201ENSMUST00000207478 281 ntBASIC5.74□□□□□ -1.49
Shank3Q4ACU6 Gm30954-201ENSMUST00000208715 1210 ntTSL 5 BASIC5.74□□□□□ -1.49
Shank3Q4ACU6 AC119241.1-201ENSMUST00000223651 534 ntBASIC5.74□□□□□ -1.49
Shank3Q4ACU6 Scrg1-201ENSMUST00000034023 700 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Shank3Q4ACU6 Cacnb4-203ENSMUST00000102761 8039 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Shank3Q4ACU6 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC5.74□□□□□ -1.49
Shank3Q4ACU6 Olfr1183-202ENSMUST00000213115 8258 ntTSL 5 BASIC5.74□□□□□ -1.49
Shank3Q4ACU6 4930563J15Rik-201ENSMUST00000218306 3468 ntBASIC5.74□□□□□ -1.49
Shank3Q4ACU6 Olfr987-202ENSMUST00000111598 1418 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
Shank3Q4ACU6 Gm44109-201ENSMUST00000204514 1954 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Shank3Q4ACU6 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Shank3Q4ACU6 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Shank3Q4ACU6 Gm38218-201ENSMUST00000193555 4689 ntBASIC5.74□□□□□ -1.49
Shank3Q4ACU6 Gm13477-201ENSMUST00000121620 2687 ntBASIC5.74□□□□□ -1.49
Shank3Q4ACU6 Olfr1410-203ENSMUST00000217316 7927 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Shank3Q4ACU6 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC5.74□□□□□ -1.49
Shank3Q4ACU6 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Shank3Q4ACU6 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Shank3Q4ACU6 Gm24987-201ENSMUST00000104453 134 ntBASIC5.74□□□□□ -1.49
Shank3Q4ACU6 Gm11406-201ENSMUST00000117418 484 ntBASIC5.74□□□□□ -1.49
Shank3Q4ACU6 Gm22453-201ENSMUST00000122801 318 ntBASIC5.74□□□□□ -1.49
Shank3Q4ACU6 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC5.74□□□□□ -1.49
Shank3Q4ACU6 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms