Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm22478-201ENSMUST00000122570 154 ntBASIC6.12□□□□□ -1.43
Hmgb1P63158 Cfap61-212ENSMUST00000152515 640 ntTSL 3 BASIC6.12□□□□□ -1.43
Hmgb1P63158 Gm12301-201ENSMUST00000152963 523 ntTSL 2 BASIC6.12□□□□□ -1.43
Hmgb1P63158 Gm3851-201ENSMUST00000168653 318 ntBASIC6.12□□□□□ -1.43
Hmgb1P63158 Gm3084-201ENSMUST00000169967 598 ntBASIC6.12□□□□□ -1.43
Hmgb1P63158 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Hmgb1P63158 Gm4134-201ENSMUST00000173244 563 ntBASIC6.12□□□□□ -1.43
Hmgb1P63158 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Hmgb1P63158 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Hmgb1P63158 Zcchc10-201ENSMUST00000018383 1267 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Hmgb1P63158 Gm28527-201ENSMUST00000185210 297 ntBASIC6.12□□□□□ -1.43
Hmgb1P63158 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC6.12□□□□□ -1.43
Hmgb1P63158 Gm6501-201ENSMUST00000187178 916 ntBASIC6.12□□□□□ -1.43
Hmgb1P63158 Gm9947-202ENSMUST00000187401 687 ntTSL 5 BASIC6.12□□□□□ -1.43
Hmgb1P63158 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC6.12□□□□□ -1.43
Hmgb1P63158 Gm37051-201ENSMUST00000194535 2943 ntBASIC6.12□□□□□ -1.43
Hmgb1P63158 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC6.12□□□□□ -1.43
Hmgb1P63158 Gm42539-201ENSMUST00000197009 308 ntBASIC6.12□□□□□ -1.43
Hmgb1P63158 Gm43121-201ENSMUST00000199065 1305 ntBASIC6.12□□□□□ -1.43
Hmgb1P63158 Gm18452-201ENSMUST00000202968 1111 ntBASIC6.12□□□□□ -1.43
Hmgb1P63158 Gm7443-201ENSMUST00000206355 378 ntBASIC6.12□□□□□ -1.43
Hmgb1P63158 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Hmgb1P63158 Gm6145-203ENSMUST00000210557 835 ntTSL 5 BASIC6.12□□□□□ -1.43
Hmgb1P63158 Gm18255-201ENSMUST00000211316 765 ntBASIC6.12□□□□□ -1.43
Hmgb1P63158 AC132852.1-201ENSMUST00000214683 2324 ntBASIC6.12□□□□□ -1.43
Hmgb1P63158 Olfr1496-203ENSMUST00000219412 1067 ntAPPRIS P2 BASIC6.12□□□□□ -1.43
Hmgb1P63158 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Hmgb1P63158 AC117656.3-202ENSMUST00000225842 1055 ntBASIC6.12□□□□□ -1.43
Hmgb1P63158 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Hmgb1P63158 Ankrd12-201ENSMUST00000038116 8991 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Hmgb1P63158 Olfr1496-201ENSMUST00000057390 1067 ntAPPRIS ALT1 BASIC6.12□□□□□ -1.43
Hmgb1P63158 Tas2r136-201ENSMUST00000065532 984 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Hmgb1P63158 Olfr1337-201ENSMUST00000077247 951 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Hmgb1P63158 Tbpl2-201ENSMUST00000080453 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Hmgb1P63158 Gm25699-201ENSMUST00000082896 167 ntBASIC6.12□□□□□ -1.43
Hmgb1P63158 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Hmgb1P63158 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Hmgb1P63158 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Hmgb1P63158 Olfr615-202ENSMUST00000214345 3403 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Hmgb1P63158 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Hmgb1P63158 Dazl-201ENSMUST00000010736 2942 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Hmgb1P63158 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Hmgb1P63158 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
Hmgb1P63158 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC6.11□□□□□ -1.43
Hmgb1P63158 Klhl24-201ENSMUST00000023509 6683 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hmgb1P63158 Gm44435-201ENSMUST00000204379 4119 ntBASIC6.11□□□□□ -1.43
Hmgb1P63158 Lrrc4c-202ENSMUST00000135431 3646 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hmgb1P63158 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hmgb1P63158 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
Hmgb1P63158 Gm38032-201ENSMUST00000195052 1589 ntBASIC6.11□□□□□ -1.43
Hmgb1P63158 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hmgb1P63158 Zpld1-202ENSMUST00000143914 2697 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hmgb1P63158 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hmgb1P63158 Tcrg-V7-201ENSMUST00000103553 368 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Hmgb1P63158 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hmgb1P63158 Lrrc69-202ENSMUST00000108276 1210 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hmgb1P63158 S100a9-202ENSMUST00000117167 519 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hmgb1P63158 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC6.11□□□□□ -1.43
Hmgb1P63158 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hmgb1P63158 Gm15103-201ENSMUST00000119893 871 ntBASIC6.11□□□□□ -1.43
Hmgb1P63158 Gm5123-201ENSMUST00000121905 837 ntBASIC6.11□□□□□ -1.43
Hmgb1P63158 Gm5755-201ENSMUST00000152394 837 ntBASIC6.11□□□□□ -1.43
Hmgb1P63158 Gm23960-201ENSMUST00000157206 131 ntBASIC6.11□□□□□ -1.43
Hmgb1P63158 Mir5098-201ENSMUST00000175320 82 ntBASIC6.11□□□□□ -1.43
Hmgb1P63158 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hmgb1P63158 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Hmgb1P63158 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Hmgb1P63158 Lax1-202ENSMUST00000189524 628 ntTSL 2 BASIC6.11□□□□□ -1.43
Hmgb1P63158 Gm32391-201ENSMUST00000191839 540 ntTSL 2 BASIC6.11□□□□□ -1.43
Hmgb1P63158 9430087J23Rik-201ENSMUST00000195414 1152 ntBASIC6.11□□□□□ -1.43
Hmgb1P63158 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hmgb1P63158 4930512P04Rik-201ENSMUST00000197000 424 ntBASIC6.11□□□□□ -1.43
Hmgb1P63158 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC6.11□□□□□ -1.43
Hmgb1P63158 Gm43659-201ENSMUST00000200894 628 ntBASIC6.11□□□□□ -1.43
Hmgb1P63158 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC6.11□□□□□ -1.43
Hmgb1P63158 AC156832.1-201ENSMUST00000217609 811 ntTSL 5 BASIC6.11□□□□□ -1.43
Hmgb1P63158 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC6.11□□□□□ -1.43
Hmgb1P63158 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC6.11□□□□□ -1.43
Hmgb1P63158 Gm19233-201ENSMUST00000219772 936 ntBASIC6.11□□□□□ -1.43
Hmgb1P63158 AC131029.2-201ENSMUST00000226696 628 ntBASIC6.11□□□□□ -1.43
Hmgb1P63158 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hmgb1P63158 S100a9-201ENSMUST00000069960 512 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hmgb1P63158 Olfr121-201ENSMUST00000074555 1253 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hmgb1P63158 Olfr203-201ENSMUST00000089305 924 ntBASIC6.11□□□□□ -1.43
Hmgb1P63158 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Hmgb1P63158 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Hmgb1P63158 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hmgb1P63158 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hmgb1P63158 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hmgb1P63158 Gm13928-201ENSMUST00000120326 1732 ntBASIC6.11□□□□□ -1.43
Hmgb1P63158 Olfr1317-203ENSMUST00000214801 2578 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Hmgb1P63158 Jade3-201ENSMUST00000043693 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Hmgb1P63158 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Hmgb1P63158 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Hmgb1P63158 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Hmgb1P63158 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Hmgb1P63158 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Hmgb1P63158 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Hmgb1P63158 Olfr495-201ENSMUST00000210990 1440 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Hmgb1P63158 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms