Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC7.03□□□□□ -1.28
Cux1P53564 Snora64-201ENSMUST00000104521 134 ntBASIC7.03□□□□□ -1.28
Cux1P53564 Gm14369-201ENSMUST00000121355 285 ntBASIC7.03□□□□□ -1.28
Cux1P53564 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC7.03□□□□□ -1.28
Cux1P53564 Gm21820-201ENSMUST00000179056 1083 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Cux1P53564 Trbv11-201ENSMUST00000194354 260 ntBASIC7.03□□□□□ -1.28
Cux1P53564 Gm43895-201ENSMUST00000203219 855 ntBASIC7.03□□□□□ -1.28
Cux1P53564 Gm18011-201ENSMUST00000203717 565 ntBASIC7.03□□□□□ -1.28
Cux1P53564 Gm45359-201ENSMUST00000210635 427 ntBASIC7.03□□□□□ -1.28
Cux1P53564 Gm40608-201ENSMUST00000213692 654 ntTSL 3 BASIC7.03□□□□□ -1.28
Cux1P53564 Gm18510-201ENSMUST00000219335 1096 ntBASIC7.03□□□□□ -1.28
Cux1P53564 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC7.03□□□□□ -1.28
Cux1P53564 Vmn2r77-201ENSMUST00000164996 2565 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Cux1P53564 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Cux1P53564 Gm37558-201ENSMUST00000193684 2983 ntBASIC7.03□□□□□ -1.28
Cux1P53564 Olfr129-202ENSMUST00000216476 5275 ntAPPRIS P1 TSL 3 BASIC7.03□□□□□ -1.28
Cux1P53564 Olfr1500-202ENSMUST00000214475 2697 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Cux1P53564 Gm26996-201ENSMUST00000204418 1359 ntBASIC7.02□□□□□ -1.29
Cux1P53564 Olfr698-202ENSMUST00000214306 4006 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Cux1P53564 Gm15394-201ENSMUST00000119656 1308 ntBASIC7.02□□□□□ -1.29
Cux1P53564 Gm11625-201ENSMUST00000119535 296 ntBASIC7.02□□□□□ -1.29
Cux1P53564 Gm4134-201ENSMUST00000173244 563 ntBASIC7.02□□□□□ -1.29
Cux1P53564 Gm28471-201ENSMUST00000185994 615 ntBASIC7.02□□□□□ -1.29
Cux1P53564 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC7.02□□□□□ -1.29
Cux1P53564 Gm6261-201ENSMUST00000204707 760 ntBASIC7.02□□□□□ -1.29
Cux1P53564 Gm17737-201ENSMUST00000210183 1147 ntBASIC7.02□□□□□ -1.29
Cux1P53564 Olfr879-ps1-201ENSMUST00000212455 694 ntBASIC7.02□□□□□ -1.29
Cux1P53564 Gm45727-201ENSMUST00000212886 572 ntBASIC7.02□□□□□ -1.29
Cux1P53564 Gm46998-201ENSMUST00000221444 330 ntBASIC7.02□□□□□ -1.29
Cux1P53564 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC7.02□□□□□ -1.29
Cux1P53564 Gm26861-206ENSMUST00000222633 1039 ntTSL 5 BASIC7.02□□□□□ -1.29
Cux1P53564 Fabp9-201ENSMUST00000029038 583 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Cux1P53564 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Cux1P53564 Olfr1175-ps-201ENSMUST00000214207 5552 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Cux1P53564 Vmn2r63-201ENSMUST00000163803 2580 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Cux1P53564 Vmn2r62-201ENSMUST00000169130 2580 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Cux1P53564 Gm31822-201ENSMUST00000216096 2572 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Cux1P53564 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC7.02□□□□□ -1.29
Cux1P53564 Pramef25-201ENSMUST00000105766 1684 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Cux1P53564 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Cux1P53564 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC7.02□□□□□ -1.29
Cux1P53564 1700017N19Rik-203ENSMUST00000187119 1524 ntTSL 5 BASIC7.02□□□□□ -1.29
Cux1P53564 Olfr685-204ENSMUST00000217432 3246 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
Cux1P53564 Primpol-201ENSMUST00000040468 3772 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Cux1P53564 AC153912.2-201ENSMUST00000215840 2015 ntBASIC7.02□□□□□ -1.29
Cux1P53564 Vmn1r20-202ENSMUST00000227909 3709 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Cux1P53564 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Cux1P53564 AC127371.2-201ENSMUST00000228108 1933 ntBASIC7.02□□□□□ -1.29
Cux1P53564 Gm22269-201ENSMUST00000104002 130 ntBASIC7.01□□□□□ -1.29
Cux1P53564 Gm15012-201ENSMUST00000119176 106 ntBASIC7.01□□□□□ -1.29
Cux1P53564 Gm14784-201ENSMUST00000121604 663 ntBASIC7.01□□□□□ -1.29
Cux1P53564 Gm12724-201ENSMUST00000140196 665 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Cux1P53564 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC7.01□□□□□ -1.29
Cux1P53564 Gm28619-201ENSMUST00000185889 622 ntTSL 5 BASIC7.01□□□□□ -1.29
Cux1P53564 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC7.01□□□□□ -1.29
Cux1P53564 Gm37231-201ENSMUST00000191716 621 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Cux1P53564 Gm38159-202ENSMUST00000194145 621 ntTSL 5 BASIC7.01□□□□□ -1.29
Cux1P53564 Gm37734-201ENSMUST00000194294 621 ntTSL 5 BASIC7.01□□□□□ -1.29
Cux1P53564 Gm36941-202ENSMUST00000194799 621 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Cux1P53564 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC7.01□□□□□ -1.29
Cux1P53564 Gm37378-202ENSMUST00000195795 621 ntTSL 5 BASIC7.01□□□□□ -1.29
Cux1P53564 Gm37130-202ENSMUST00000195874 621 ntTSL 5 BASIC7.01□□□□□ -1.29
Cux1P53564 AC122448.1-201ENSMUST00000226317 772 ntBASIC7.01□□□□□ -1.29
Cux1P53564 Mecom-212ENSMUST00000173495 5066 ntAPPRIS P5 TSL 5 BASIC7.01□□□□□ -1.29
Cux1P53564 Gm37514-201ENSMUST00000194512 2753 ntBASIC7.01□□□□□ -1.29
Cux1P53564 Gm38190-201ENSMUST00000192350 4755 ntBASIC7.01□□□□□ -1.29
Cux1P53564 Gm3629-201ENSMUST00000171706 1756 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Cux1P53564 Tinag-201ENSMUST00000034911 1726 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Cux1P53564 Gm5379-201ENSMUST00000120973 826 ntBASIC7.01□□□□□ -1.29
Cux1P53564 Gm12332-201ENSMUST00000121397 922 ntBASIC7.01□□□□□ -1.29
Cux1P53564 Gm13214-201ENSMUST00000122137 408 ntBASIC7.01□□□□□ -1.29
Cux1P53564 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC7.01□□□□□ -1.29
Cux1P53564 Gm17046-201ENSMUST00000168078 850 ntBASIC7.01□□□□□ -1.29
Cux1P53564 Gm28709-201ENSMUST00000186967 456 ntTSL 5 BASIC7.01□□□□□ -1.29
Cux1P53564 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC7.01□□□□□ -1.29
Cux1P53564 AC110816.1-201ENSMUST00000218559 980 ntBASIC7.01□□□□□ -1.29
Cux1P53564 AC122035.2-201ENSMUST00000228698 462 ntBASIC7.01□□□□□ -1.29
Cux1P53564 Olfr480-201ENSMUST00000071658 1029 ntBASIC7.01□□□□□ -1.29
Cux1P53564 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Cux1P53564 Aftph-205ENSMUST00000146722 3763 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
Cux1P53564 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC7.01□□□□□ -1.29
Cux1P53564 Gm42992-201ENSMUST00000197043 6836 ntBASIC7.01□□□□□ -1.29
Cux1P53564 A730081D07Rik-201ENSMUST00000153685 1804 ntTSL 1 (best) BASIC7□□□□□ -1.29
Cux1P53564 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
Cux1P53564 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC7□□□□□ -1.29
Cux1P53564 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Cux1P53564 Adam24-201ENSMUST00000051614 2887 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Cux1P53564 Zfp644-201ENSMUST00000045466 5569 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
Cux1P53564 Gm42645-201ENSMUST00000201573 1627 ntBASIC7□□□□□ -1.29
Cux1P53564 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC7□□□□□ -1.29
Cux1P53564 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Cux1P53564 Olfr1016-203ENSMUST00000217410 2738 ntAPPRIS P1 TSL 3 BASIC7□□□□□ -1.29
Cux1P53564 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC7□□□□□ -1.29
Cux1P53564 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC7□□□□□ -1.29
Cux1P53564 Amd-ps1-201ENSMUST00000120127 994 ntBASIC7□□□□□ -1.29
Cux1P53564 Il3-201ENSMUST00000019058 629 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Cux1P53564 Olfr1119-ps1-201ENSMUST00000215282 634 ntBASIC7□□□□□ -1.29
Cux1P53564 Pgap1-201ENSMUST00000097739 10583 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Cux1P53564 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
Cux1P53564 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC6.99□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 92 ms